RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 COX8AP10176 69 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 NMUP48645 174 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 MIAQ16674 131 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 UBE2DNLQ8IWF7 75 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 C14orf144Q96I85 54 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 Q9H8V8 135 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 K7EP13 123 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 LEPROTO15243 131 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 XCL1P47992 114 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 CD164L2Q6UWJ8 174 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 CHCHD10Q8WYQ3 142 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 PLEKHB2Q96CS7 222 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 UQCR10Q9UDW1 63 aa8.59□□□□□ -1.03
HMGB3P4-201ENST00000428776 A0A087WZ39 114 aa8.58□□□□□ -1.04
HMGB3P4-201ENST00000428776 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
HMGB3P4-201ENST00000428776 DLEU1O43261 78 aa8.58□□□□□ -1.04
HMGB3P4-201ENST00000428776 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
HMGB3P4-201ENST00000428776 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
HMGB3P4-201ENST00000428776 C10orf126Q8N4M7 172 aa8.58□□□□□ -1.04
HMGB3P4-201ENST00000428776 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 IBA57-AS1B1ANH7 110 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 J3QQQ9 107 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
HMGB3P4-201ENST00000428776 TRAV8-3A0A0A6YYJ7 113 aa8.56□□□□□ -1.04
HMGB3P4-201ENST00000428776 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
HMGB3P4-201ENST00000428776 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
HMGB3P4-201ENST00000428776 IGHV3-64A0A075B6Q5 118 aa8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 GAGE12HA6NDE8 117 aa8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 PCP4L1A6NKN8 68 aa8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 COX7A2LO14548 114 aa8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 LGALS3P17931 250 aaKnown RBP8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 FOXI1Q12951 378 aa8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 C5orf38Q86SI9 138 aa8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
HMGB3P4-201ENST00000428776 DDTP30046 118 aa8.54□□□□□ -1.04
HMGB3P4-201ENST00000428776 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
HMGB3P4-201ENST00000428776 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
HMGB3P4-201ENST00000428776 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
HMGB3P4-201ENST00000428776 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
HMGB3P4-201ENST00000428776 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
HMGB3P4-201ENST00000428776 DNAH7Q8WXX0 4024 aa8.52□□□□□ -1.04
HMGB3P4-201ENST00000428776 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
HMGB3P4-201ENST00000428776 C3orf84H3BNL1 204 aa8.52□□□□□ -1.05
HMGB3P4-201ENST00000428776 MALP21145 153 aa8.52□□□□□ -1.05
HMGB3P4-201ENST00000428776 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
HMGB3P4-201ENST00000428776 RMI2Q96E14 147 aa8.52□□□□□ -1.05
HMGB3P4-201ENST00000428776 APOMO95445 188 aa8.51□□□□□ -1.05
HMGB3P4-201ENST00000428776 HNRNPA3P51991 378 aaKnown RBP8.51□□□□□ -1.05
HMGB3P4-201ENST00000428776 CASC10Q5T4H9 136 aa8.51□□□□□ -1.05
HMGB3P4-201ENST00000428776 COX7B2Q8TF08 81 aa8.51□□□□□ -1.05
HMGB3P4-201ENST00000428776 Q9HAA7 133 aa8.51□□□□□ -1.05
HMGB3P4-201ENST00000428776 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
HMGB3P4-201ENST00000428776 IGKV2D-24A0A075B6R9 120 aa8.5□□□□□ -1.05
HMGB3P4-201ENST00000428776 TTC32Q5I0X7 151 aa8.5□□□□□ -1.05
HMGB3P4-201ENST00000428776 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
HMGB3P4-201ENST00000428776 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
HMGB3P4-201ENST00000428776 COX11Q9Y6N1 276 aa8.5□□□□□ -1.05
HMGB3P4-201ENST00000428776 NDUFA1O15239 70 aa8.49□□□□□ -1.05
HMGB3P4-201ENST00000428776 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
HMGB3P4-201ENST00000428776 Q8IZM0 81 aa8.49□□□□□ -1.05
HMGB3P4-201ENST00000428776 TOMM7Q9P0U1 55 aa8.49□□□□□ -1.05
HMGB3P4-201ENST00000428776 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 PRSS2P07478 247 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 ORAOV1Q8WV07 137 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
HMGB3P4-201ENST00000428776 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P4-201ENST00000428776 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
HMGB3P4-201ENST00000428776 A0A0J9YXY3 114 aa8.46□□□□□ -1.06
HMGB3P4-201ENST00000428776 HERV-K104P63124 156 aa8.46□□□□□ -1.06
HMGB3P4-201ENST00000428776 CTAG1AP78358 180 aa8.46□□□□□ -1.06
HMGB3P4-201ENST00000428776 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
HMGB3P4-201ENST00000428776 CFAP161Q6P656 301 aa8.46□□□□□ -1.06
HMGB3P4-201ENST00000428776 CXCL5P42830 114 aa8.45□□□□□ -1.06
HMGB3P4-201ENST00000428776 CKS1BP61024 79 aa8.45□□□□□ -1.06
HMGB3P4-201ENST00000428776 LINC00587B1AMM8 73 aa8.44□□□□□ -1.06
HMGB3P4-201ENST00000428776 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
HMGB3P4-201ENST00000428776 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
HMGB3P4-201ENST00000428776 TIMM17BO60830 172 aa8.43□□□□□ -1.06
HMGB3P4-201ENST00000428776 CIRBPQ14011 172 aaKnown RBP8.43□□□□□ -1.06
HMGB3P4-201ENST00000428776 TAL2Q16559 108 aa8.43□□□□□ -1.06
HMGB3P4-201ENST00000428776 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
HMGB3P4-201ENST00000428776 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
HMGB3P4-201ENST00000428776 PLECQ15149 4684 aaKnown RBP8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 ZNF561-AS1K7EIQ3 104 aa8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 LY6G6CO95867 125 aa8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 HSD52Q0P140 79 aa8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 NTN5Q8WTR8 489 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 LINC00476Q8WZB0 136 aa8.42□□□□□ -1.06
HMGB3P4-201ENST00000428776 GVQW2A0A096LPI5 108 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms