RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RAB5AP20339 215 aa11.5□□□□□ -0.57
PSPC1-202ENST00000427943 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
PSPC1-202ENST00000427943 MT-ND4LP03901 98 aa11.49□□□□□ -0.57
PSPC1-202ENST00000427943 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
PSPC1-202ENST00000427943 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
PSPC1-202ENST00000427943 A0A0J9YXV3 536 aa11.48□□□□□ -0.57
PSPC1-202ENST00000427943 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
PSPC1-202ENST00000427943 ORAOV1Q8WV07 137 aa11.48□□□□□ -0.57
PSPC1-202ENST00000427943 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
PSPC1-202ENST00000427943 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-202ENST00000427943 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
PSPC1-202ENST00000427943 RPL18AQ02543 176 aaKnown RBP11.47□□□□□ -0.57
PSPC1-202ENST00000427943 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
PSPC1-202ENST00000427943 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
PSPC1-202ENST00000427943 IGLV4-3A0A075B6K6 122 aa11.45□□□□□ -0.58
PSPC1-202ENST00000427943 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
PSPC1-202ENST00000427943 LAMTOR2Q9Y2Q5 125 aa11.45□□□□□ -0.58
PSPC1-202ENST00000427943 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
PSPC1-202ENST00000427943 TGIF2-C20orf24A0A0A6YYL0 155 aa11.43□□□□□ -0.58
PSPC1-202ENST00000427943 PRSS47A8MTI9 375 aa11.43□□□□□ -0.58
PSPC1-202ENST00000427943 CLLU1Q5K131 121 aa11.43□□□□□ -0.58
PSPC1-202ENST00000427943 TMEM141Q96I45 108 aa11.43□□□□□ -0.58
PSPC1-202ENST00000427943 PYGO1Q9Y3Y4 419 aa11.43□□□□□ -0.58
PSPC1-202ENST00000427943 Q8N8P6 123 aa11.42□□□□□ -0.58
PSPC1-202ENST00000427943 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 NDUFA1O15239 70 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 ADCYAP1P18509 176 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
PSPC1-202ENST00000427943 LINC00242Q5T6M2 205 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 ZC2HC1BQ5TFG8 222 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 Q6ZRP5 223 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
PSPC1-202ENST00000427943 CYSLTR1Q9Y271 337 aa11.41□□□□□ -0.58
PSPC1-202ENST00000427943 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
PSPC1-202ENST00000427943 TEX43Q6ZNM6 134 aa11.4□□□□□ -0.58
PSPC1-202ENST00000427943 A0A087WZ39 114 aa11.39□□□□□ -0.59
PSPC1-202ENST00000427943 CTDSP1Q9GZU7 261 aa11.39□□□□□ -0.59
PSPC1-202ENST00000427943 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
PSPC1-202ENST00000427943 UBE2D1P51668 147 aa11.38□□□□□ -0.59
PSPC1-202ENST00000427943 SPINK6Q6UWN8 80 aa11.38□□□□□ -0.59
PSPC1-202ENST00000427943 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
PSPC1-202ENST00000427943 PHF5AQ7RTV0 110 aaKnown RBP11.38□□□□□ -0.59
PSPC1-202ENST00000427943 F8WDY8 70 aa11.37□□□□□ -0.59
PSPC1-202ENST00000427943 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
PSPC1-202ENST00000427943 Q6ZN92 141 aa11.37□□□□□ -0.59
PSPC1-202ENST00000427943 LINC01600Q96MT4 127 aa11.37□□□□□ -0.59
PSPC1-202ENST00000427943 IMMP2LQ96T52 175 aa11.37□□□□□ -0.59
PSPC1-202ENST00000427943 C2orf88Q9BSF0 95 aa11.37□□□□□ -0.59
PSPC1-202ENST00000427943 IFITM2Q01629 132 aa11.36□□□□□ -0.59
PSPC1-202ENST00000427943 KIAA0087Q14695 138 aa11.36□□□□□ -0.59
PSPC1-202ENST00000427943 KIAA1644Q3SXP7 199 aa11.36□□□□□ -0.59
PSPC1-202ENST00000427943 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
PSPC1-202ENST00000427943 TMEM218A2RU14 115 aa11.35□□□□□ -0.59
PSPC1-202ENST00000427943 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSPC1-202ENST00000427943 UQCC3Q6UW78 93 aa11.35□□□□□ -0.59
PSPC1-202ENST00000427943 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
PSPC1-202ENST00000427943 NXT2Q9NPJ8 142 aaKnown RBP11.35□□□□□ -0.59
PSPC1-202ENST00000427943 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
PSPC1-202ENST00000427943 MT-ND6P03923 174 aa11.34□□□□□ -0.59
PSPC1-202ENST00000427943 ODF1Q14990 250 aa11.34□□□□□ -0.59
PSPC1-202ENST00000427943 AMELXQ99217 191 aa11.34□□□□□ -0.59
PSPC1-202ENST00000427943 VCX2Q9H322 139 aa11.34□□□□□ -0.59
PSPC1-202ENST00000427943 IGIPA6NJ69 53 aa11.33□□□□□ -0.6
PSPC1-202ENST00000427943 K7EMI3 77 aa11.33□□□□□ -0.6
PSPC1-202ENST00000427943 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
PSPC1-202ENST00000427943 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
PSPC1-202ENST00000427943 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
PSPC1-202ENST00000427943 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-202ENST00000427943 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
PSPC1-202ENST00000427943 TNXBP22105 4242 aa11.32□□□□□ -0.6
PSPC1-202ENST00000427943 C1orf137Q5JT78 98 aa11.31□□□□□ -0.6
PSPC1-202ENST00000427943 TOMM7Q9P0U1 55 aa11.31□□□□□ -0.6
PSPC1-202ENST00000427943 TRBV30A0A0K0K1B3 111 aa11.3□□□□□ -0.6
PSPC1-202ENST00000427943 NPSP0C0P6 89 aa11.3□□□□□ -0.6
PSPC1-202ENST00000427943 LINC01561Q8N1V8 128 aa11.3□□□□□ -0.6
PSPC1-202ENST00000427943 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
PSPC1-202ENST00000427943 KRTAP11-1Q8IUC1 163 aa11.29□□□□□ -0.6
PSPC1-202ENST00000427943 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
PSPC1-202ENST00000427943 PRSS2P07478 247 aa11.28□□□□□ -0.6
PSPC1-202ENST00000427943 FAM19A3Q7Z5A8 133 aa11.28□□□□□ -0.6
PSPC1-202ENST00000427943 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
PSPC1-202ENST00000427943 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
PSPC1-202ENST00000427943 TIMM17AQ99595 171 aa11.28□□□□□ -0.6
PSPC1-202ENST00000427943 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
PSPC1-202ENST00000427943 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
PSPC1-202ENST00000427943 S100PP25815 95 aa11.27□□□□□ -0.61
PSPC1-202ENST00000427943 KRTAP7-1Q8IUC3 87 aa11.27□□□□□ -0.61
PSPC1-202ENST00000427943 G0S2P27469 103 aa11.26□□□□□ -0.61
PSPC1-202ENST00000427943 KRTAP10-8P60410 259 aa11.26□□□□□ -0.61
PSPC1-202ENST00000427943 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
PSPC1-202ENST00000427943 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
PSPC1-202ENST00000427943 M0QXV9 152 aa11.25□□□□□ -0.61
PSPC1-202ENST00000427943 CKS1BP61024 79 aa11.25□□□□□ -0.61
PSPC1-202ENST00000427943 HERVK_113P63121 156 aa11.25□□□□□ -0.61
PSPC1-202ENST00000427943 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
PSPC1-202ENST00000427943 Q8IZM0 81 aa11.25□□□□□ -0.61
PSPC1-202ENST00000427943 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms