RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 KIAA0087Q14695 138 aa9.89□□□□□ -0.83
HLA-DQB2-230ENST00000427449 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
HLA-DQB2-230ENST00000427449 TMEM18Q96B42 140 aa9.89□□□□□ -0.83
HLA-DQB2-230ENST00000427449 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
HLA-DQB2-230ENST00000427449 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
HLA-DQB2-230ENST00000427449 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
HLA-DQB2-230ENST00000427449 KRTAP7-1Q8IUC3 87 aa9.88□□□□□ -0.83
HLA-DQB2-230ENST00000427449 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
HLA-DQB2-230ENST00000427449 LAMTOR2Q9Y2Q5 125 aa9.88□□□□□ -0.83
HLA-DQB2-230ENST00000427449 A0A0J9YXV3 536 aa9.87□□□□□ -0.83
HLA-DQB2-230ENST00000427449 APOMO95445 188 aa9.87□□□□□ -0.83
HLA-DQB2-230ENST00000427449 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
HLA-DQB2-230ENST00000427449 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
HLA-DQB2-230ENST00000427449 LOC107984640A0A0U1RRK4 108 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 MT-ND4LP03901 98 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 RNF151Q2KHN1 245 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 KRTAP11-1Q8IUC1 163 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 Q8N8P6 123 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 AMELXQ99217 191 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 MRPL35Q9NZE8 188 aaKnown RBP9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
HLA-DQB2-230ENST00000427449 A0A087WZ39 114 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 MALP21145 153 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 UBE2D1P51668 147 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 ODF1Q14990 250 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 ORAOV1Q8WV07 137 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 UBR4Q5T4S7 5183 aa9.85□□□□□ -0.83
HLA-DQB2-230ENST00000427449 TMEM218A2RU14 115 aa9.84□□□□□ -0.83
HLA-DQB2-230ENST00000427449 SERTAD4-AS1Q5TG53 156 aa9.84□□□□□ -0.83
HLA-DQB2-230ENST00000427449 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
HLA-DQB2-230ENST00000427449 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
HLA-DQB2-230ENST00000427449 IMMP2LQ96T52 175 aa9.84□□□□□ -0.83
HLA-DQB2-230ENST00000427449 LOC389332A0A1B0GUA5 103 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 Q6ZRP5 223 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 MAP1LC3AQ9H492 121 aa9.83□□□□□ -0.84
HLA-DQB2-230ENST00000427449 IFI27P40305 119 aaPredicted RBP9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 RAB14P61106 215 aa9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
HLA-DQB2-230ENST00000427449 FAM168BA1KXE4 195 aa9.81□□□□□ -0.84
HLA-DQB2-230ENST00000427449 C10orf91Q5T1B1 145 aa9.81□□□□□ -0.84
HLA-DQB2-230ENST00000427449 LINC01546A6NGU7 62 aa9.8□□□□□ -0.84
HLA-DQB2-230ENST00000427449 F8WDY8 70 aa9.8□□□□□ -0.84
HLA-DQB2-230ENST00000427449 NPSP0C0P6 89 aa9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 RAB5AP20339 215 aa9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 PHF5AQ7RTV0 110 aaKnown RBP9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 CYSLTR1Q9Y271 337 aa9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 LRP2P98164 4655 aa9.79□□□□□ -0.84
HLA-DQB2-230ENST00000427449 K7EMI3 77 aa9.78□□□□□ -0.84
HLA-DQB2-230ENST00000427449 KIAA1644Q3SXP7 199 aa9.78□□□□□ -0.84
HLA-DQB2-230ENST00000427449 C2orf82Q6UX34 121 aa9.78□□□□□ -0.84
HLA-DQB2-230ENST00000427449 LINC01561Q8N1V8 128 aa9.78□□□□□ -0.84
HLA-DQB2-230ENST00000427449 SEC11CQ9BY50 192 aa9.78□□□□□ -0.84
HLA-DQB2-230ENST00000427449 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
HLA-DQB2-230ENST00000427449 TRAV9-1A0A075B6T8 112 aa9.77□□□□□ -0.85
HLA-DQB2-230ENST00000427449 NDUFA1O15239 70 aa9.77□□□□□ -0.85
HLA-DQB2-230ENST00000427449 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
HLA-DQB2-230ENST00000427449 TEX43Q6ZNM6 134 aa9.77□□□□□ -0.85
HLA-DQB2-230ENST00000427449 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
HLA-DQB2-230ENST00000427449 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
HLA-DQB2-230ENST00000427449 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
HLA-DQB2-230ENST00000427449 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB2-230ENST00000427449 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
HLA-DQB2-230ENST00000427449 NXT2Q9NPJ8 142 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB2-230ENST00000427449 PLA2G2DQ9UNK4 145 aa9.76□□□□□ -0.85
HLA-DQB2-230ENST00000427449 TIMM17AQ99595 171 aa9.75□□□□□ -0.85
HLA-DQB2-230ENST00000427449 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
HLA-DQB2-230ENST00000427449 CARHSP1Q9Y2V2 147 aaKnown RBP9.75□□□□□ -0.85
HLA-DQB2-230ENST00000427449 A0A096LNJ9 63 aa9.73□□□□□ -0.85
HLA-DQB2-230ENST00000427449 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
HLA-DQB2-230ENST00000427449 COMMD7Q86VX2 200 aa9.73□□□□□ -0.85
HLA-DQB2-230ENST00000427449 URB1-AS1Q96HZ7 61 aa9.73□□□□□ -0.85
HLA-DQB2-230ENST00000427449 GNB1LQ9BYB4 327 aa9.73□□□□□ -0.85
HLA-DQB2-230ENST00000427449 CDKN2A-AS1Q9UH64 79 aa9.73□□□□□ -0.85
HLA-DQB2-230ENST00000427449 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
HLA-DQB2-230ENST00000427449 SMIM1B2RUZ4 78 aa9.7□□□□□ -0.86
HLA-DQB2-230ENST00000427449 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
HLA-DQB2-230ENST00000427449 Q8IZM0 81 aa9.7□□□□□ -0.86
HLA-DQB2-230ENST00000427449 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
HLA-DQB2-230ENST00000427449 VCX2Q9H322 139 aa9.7□□□□□ -0.86
HLA-DQB2-230ENST00000427449 Q6ZN92 141 aa9.69□□□□□ -0.86
HLA-DQB2-230ENST00000427449 ERASQ7Z444 233 aa9.69□□□□□ -0.86
HLA-DQB2-230ENST00000427449 FAM19A5Q7Z5A7 132 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB2-230ENST00000427449 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
HLA-DQB2-230ENST00000427449 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
HLA-DQB2-230ENST00000427449 IGLV7-43P04211 117 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms