RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DEFB1P60022 68 aa10.68□□□□□ -0.7
PTPN13-203ENST00000427191 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
PTPN13-203ENST00000427191 TRBV7-6A0A0J9YX20 115 aa10.67□□□□□ -0.7
PTPN13-203ENST00000427191 KLLNB2CW77 178 aa10.67□□□□□ -0.7
PTPN13-203ENST00000427191 SPINK6Q6UWN8 80 aa10.67□□□□□ -0.7
PTPN13-203ENST00000427191 RETNQ9HD89 108 aa10.67□□□□□ -0.7
PTPN13-203ENST00000427191 M0QXV9 152 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 LMO4P61968 165 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 PRORYQ9H606 182 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 LINC00959A0A1B0GUT2 108 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 CUL9Q8IWT3 2517 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
PTPN13-203ENST00000427191 PLAC8L1A1L4L8 177 aa10.65□□□□□ -0.7
PTPN13-203ENST00000427191 SRCAPQ6ZRS2 3230 aa10.65□□□□□ -0.7
PTPN13-203ENST00000427191 PSMG3-AS1Q96PY0 264 aa10.65□□□□□ -0.7
PTPN13-203ENST00000427191 ZFHX2Q9C0A1 2572 aaPredicted RBP10.65□□□□□ -0.7
PTPN13-203ENST00000427191 LRP4O75096 1905 aa10.65□□□□□ -0.7
PTPN13-203ENST00000427191 Q8N814 137 aa10.65□□□□□ -0.71
PTPN13-203ENST00000427191 IGHV4-31P0DP07 118 aa10.64□□□□□ -0.71
PTPN13-203ENST00000427191 EGFEM1PQ0D2K5 195 aa10.64□□□□□ -0.71
PTPN13-203ENST00000427191 KPRPQ5T749 579 aaPredicted RBP10.64□□□□□ -0.71
PTPN13-203ENST00000427191 PTPRBP23467 1997 aa10.64□□□□□ -0.71
PTPN13-203ENST00000427191 ESRGQ1W209 222 aa10.64□□□□□ -0.71
PTPN13-203ENST00000427191 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
PTPN13-203ENST00000427191 COL5A1P20908 1838 aaPredicted RBP10.64□□□□□ -0.71
PTPN13-203ENST00000427191 XGP55808 180 aa10.64□□□□□ -0.71
PTPN13-203ENST00000427191 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
PTPN13-203ENST00000427191 POLR2KP53803 58 aaKnown RBP10.63□□□□□ -0.71
PTPN13-203ENST00000427191 CRIP1P50238 77 aa10.63□□□□□ -0.71
PTPN13-203ENST00000427191 hDV103S1A0JD37 113 aa10.62□□□□□ -0.71
PTPN13-203ENST00000427191 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
PTPN13-203ENST00000427191 REG3GQ6UW15 175 aa10.62□□□□□ -0.71
PTPN13-203ENST00000427191 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
PTPN13-203ENST00000427191 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
PTPN13-203ENST00000427191 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
PTPN13-203ENST00000427191 C22orf34Q6ZV56 151 aa10.6□□□□□ -0.71
PTPN13-203ENST00000427191 IGLV9-49A0A0B4J1Y8 123 aa10.6□□□□□ -0.71
PTPN13-203ENST00000427191 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
PTPN13-203ENST00000427191 HIVEP3Q5T1R4 2406 aa10.59□□□□□ -0.71
PTPN13-203ENST00000427191 LINC00208Q96KT6 92 aa10.59□□□□□ -0.71
PTPN13-203ENST00000427191 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
PTPN13-203ENST00000427191 BBC3Q96PG8 261 aaPredicted RBP10.59□□□□□ -0.71
PTPN13-203ENST00000427191 NUPR2A6NF83 97 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 CXCL6P80162 114 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 LINC01561Q8N1V8 128 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 TRBV7-7A0A0K0K1E9 115 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 PRR4Q16378 134 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 PPDPFQ9H3Y8 114 aa10.57□□□□□ -0.72
PTPN13-203ENST00000427191 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
PTPN13-203ENST00000427191 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
PTPN13-203ENST00000427191 BRWD1-AS2P59051 145 aa10.56□□□□□ -0.72
PTPN13-203ENST00000427191 CELA1Q9UNI1 258 aa10.56□□□□□ -0.72
PTPN13-203ENST00000427191 ZNF843Q8N446 348 aa10.56□□□□□ -0.72
PTPN13-203ENST00000427191 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
PTPN13-203ENST00000427191 CYSRT1A8MQ03 144 aa10.55□□□□□ -0.72
PTPN13-203ENST00000427191 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
PTPN13-203ENST00000427191 TRBV10-3A0A0K0K1G6 114 aa10.55□□□□□ -0.72
PTPN13-203ENST00000427191 LOC100131303A0A0U1RQF7 123 aa10.54□□□□□ -0.72
PTPN13-203ENST00000427191 LRRK2Q5S007 2527 aa10.54□□□□□ -0.72
PTPN13-203ENST00000427191 RPL37AP8A6NKH3 93 aa10.54□□□□□ -0.72
PTPN13-203ENST00000427191 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
PTPN13-203ENST00000427191 A0A1B0GW54 56 aa10.54□□□□□ -0.72
PTPN13-203ENST00000427191 Q8N3U1 123 aa10.53□□□□□ -0.72
PTPN13-203ENST00000427191 Q6ZSV7 163 aa10.53□□□□□ -0.72
PTPN13-203ENST00000427191 H0Y9P7 68 aa10.53□□□□□ -0.72
PTPN13-203ENST00000427191 VPREB1P12018 145 aa10.53□□□□□ -0.72
PTPN13-203ENST00000427191 Q8N6K4 173 aa10.53□□□□□ -0.72
PTPN13-203ENST00000427191 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
PTPN13-203ENST00000427191 COL4A4P53420 1690 aaPredicted RBP10.52□□□□□ -0.73
PTPN13-203ENST00000427191 Q8NA96 180 aa10.52□□□□□ -0.73
PTPN13-203ENST00000427191 MSMPQ1L6U9 139 aa10.52□□□□□ -0.73
PTPN13-203ENST00000427191 IGLV1-40P01703 118 aa10.52□□□□□ -0.73
PTPN13-203ENST00000427191 HCG22E2RYF7 251 aa10.51□□□□□ -0.73
PTPN13-203ENST00000427191 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
PTPN13-203ENST00000427191 Q6ZS46 218 aa10.51□□□□□ -0.73
PTPN13-203ENST00000427191 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
PTPN13-203ENST00000427191 COL4A3Q01955 1670 aa10.51□□□□□ -0.73
PTPN13-203ENST00000427191 NAV2Q8IVL1 2488 aa10.5□□□□□ -0.73
PTPN13-203ENST00000427191 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
PTPN13-203ENST00000427191 TMEM254Q8TBM7 123 aa10.5□□□□□ -0.73
PTPN13-203ENST00000427191 ZNF702PQ9H963 129 aa10.5□□□□□ -0.73
PTPN13-203ENST00000427191 PRO0628Q9UI54 55 aa10.5□□□□□ -0.73
PTPN13-203ENST00000427191 BCE1O60756 84 aa10.49□□□□□ -0.73
PTPN13-203ENST00000427191 SMIM1B2RUZ4 78 aa10.49□□□□□ -0.73
PTPN13-203ENST00000427191 IGHV6-1A0A0B4J1U7 121 aa10.49□□□□□ -0.73
PTPN13-203ENST00000427191 PROK1P58294 105 aa10.49□□□□□ -0.73
PTPN13-203ENST00000427191 C11orf71Q6IPW1 123 aa10.49□□□□□ -0.73
PTPN13-203ENST00000427191 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
PTPN13-203ENST00000427191 A0A1B0GUV1 79 aa10.48□□□□□ -0.73
PTPN13-203ENST00000427191 A8MZ25 164 aa10.47□□□□□ -0.73
PTPN13-203ENST00000427191 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
PTPN13-203ENST00000427191 SOSTDC1Q6X4U4 206 aa10.46□□□□□ -0.73
PTPN13-203ENST00000427191 Q9BRP9 147 aa10.46□□□□□ -0.73
PTPN13-203ENST00000427191 LINC00575Q6W349 94 aa10.46□□□□□ -0.74
PTPN13-203ENST00000427191 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
PTPN13-203ENST00000427191 PSPHP1O15172 72 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms