RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
GACAT3-201ENST00000426539 C5orf38Q86SI9 138 aa6.17□□□□□ -1.42
GACAT3-201ENST00000426539 CAMK2N2Q96S95 79 aa6.17□□□□□ -1.42
GACAT3-201ENST00000426539 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
GACAT3-201ENST00000426539 C9JQL5 133 aa6.16□□□□□ -1.42
GACAT3-201ENST00000426539 RPL23P62829 140 aaKnown RBP6.16□□□□□ -1.42
GACAT3-201ENST00000426539 C9orf116Q5BN46 136 aaPredicted RBP6.16□□□□□ -1.42
GACAT3-201ENST00000426539 FAM104BQ5XKR9 115 aa6.16□□□□□ -1.42
GACAT3-201ENST00000426539 C2orf48Q96LS8 159 aa6.16□□□□□ -1.42
GACAT3-201ENST00000426539 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
GACAT3-201ENST00000426539 PPP1R17O96001 155 aa6.15□□□□□ -1.42
GACAT3-201ENST00000426539 S100A1P23297 94 aa6.15□□□□□ -1.42
GACAT3-201ENST00000426539 RAB14P61106 215 aa6.15□□□□□ -1.42
GACAT3-201ENST00000426539 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
GACAT3-201ENST00000426539 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
GACAT3-201ENST00000426539 KIR2DL4Q99706 377 aa6.15□□□□□ -1.42
GACAT3-201ENST00000426539 OPRPNQ99935 248 aaPredicted RBP6.15□□□□□ -1.42
GACAT3-201ENST00000426539 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
GACAT3-201ENST00000426539 PSORS1C2Q9UIG4 136 aa6.15□□□□□ -1.42
GACAT3-201ENST00000426539 TRBV24-1A0A075B6N3 115 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 SMIM27A0A1W2PRY6 76 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 RPL32P62910 135 aaKnown RBP6.14□□□□□ -1.43
GACAT3-201ENST00000426539 SPAG11BQ08648 103 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 RNF151Q2KHN1 245 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 FAM74A3Q4VXF1 159 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 CLLU1Q5K131 121 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 C20orf78Q9BR46 151 aa6.14□□□□□ -1.43
GACAT3-201ENST00000426539 IGHV3OR16-9A0A0B4J2B5 98 aa6.13□□□□□ -1.43
GACAT3-201ENST00000426539 LINC00862A6NCI5 91 aa6.13□□□□□ -1.43
GACAT3-201ENST00000426539 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
GACAT3-201ENST00000426539 SMAGPQ0VAQ4 97 aa6.13□□□□□ -1.43
GACAT3-201ENST00000426539 C10orf25Q5T742 122 aa6.13□□□□□ -1.43
GACAT3-201ENST00000426539 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
GACAT3-201ENST00000426539 FAM168BA1KXE4 195 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 TNFRSF6BO95407 300 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 MT-ND6P03923 174 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 ADIRFQ15847 76 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 OR10D4PQ8NGN7 298 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 TMEM18Q96B42 140 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 SMIM2Q9BVW6 85 aa6.12□□□□□ -1.43
GACAT3-201ENST00000426539 MRPL35Q9NZE8 188 aaKnown RBP6.12□□□□□ -1.43
GACAT3-201ENST00000426539 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 D6R8Y8 96 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 NPYP01303 97 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 CKS2P33552 79 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 MRPS36P82909 103 aaKnown RBP6.11□□□□□ -1.43
GACAT3-201ENST00000426539 C1orf137Q5JT78 98 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 ORAOV1Q8WV07 137 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 SPANXA1Q9NS26 97 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 NAT8Q9UHE5 227 aa6.11□□□□□ -1.43
GACAT3-201ENST00000426539 A0A1B0GW15 77 aa6.1□□□□□ -1.43
GACAT3-201ENST00000426539 TCAPO15273 167 aa6.1□□□□□ -1.43
GACAT3-201ENST00000426539 MRPL54Q6P161 138 aaKnown RBP6.1□□□□□ -1.43
GACAT3-201ENST00000426539 UNQ6190/PRO20217Q6UXQ8 127 aa6.1□□□□□ -1.43
GACAT3-201ENST00000426539 F8WDY8 70 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 NDUFA1O15239 70 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 IGLV7-43P04211 117 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 TLX1NBP0CAT3 122 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 HBBP68871 147 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 COMMD7Q86VX2 200 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 PRR26Q8N8Z3 221 aa6.09□□□□□ -1.43
GACAT3-201ENST00000426539 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
GACAT3-201ENST00000426539 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
GACAT3-201ENST00000426539 IMMP2LQ96T52 175 aa6.08□□□□□ -1.44
GACAT3-201ENST00000426539 A0A087WZ39 114 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 PEA15Q15121 130 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 FAM19A5Q7Z5A7 132 aaPredicted RBP6.07□□□□□ -1.44
GACAT3-201ENST00000426539 SMDT1Q9H4I9 107 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 LPAP08519 4548 aa6.07□□□□□ -1.44
GACAT3-201ENST00000426539 IGLV4-3A0A075B6K6 122 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 C9orf118A6NHY6 69 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 F8W036 122 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 H0Y9J4 135 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 PPBPP02775 128 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 S100A8P05109 93 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 DIRC1Q969H9 104 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 PYGO1Q9Y3Y4 419 aa6.06□□□□□ -1.44
GACAT3-201ENST00000426539 IFI27P40305 119 aaPredicted RBP6.05□□□□□ -1.44
GACAT3-201ENST00000426539 C9orf129Q5T035 196 aaKnown RBP6.05□□□□□ -1.44
GACAT3-201ENST00000426539 C2orf82Q6UX34 121 aa6.05□□□□□ -1.44
GACAT3-201ENST00000426539 TMEM136Q6ZRR5 245 aa6.05□□□□□ -1.44
GACAT3-201ENST00000426539 ORMDL3Q8N138 153 aa6.05□□□□□ -1.44
GACAT3-201ENST00000426539 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
GACAT3-201ENST00000426539 TGIF2-C20orf24A0A0A6YYL0 155 aa6.04□□□□□ -1.44
GACAT3-201ENST00000426539 PRSS47A8MTI9 375 aa6.04□□□□□ -1.44
GACAT3-201ENST00000426539 M0QXV9 152 aa6.04□□□□□ -1.44
GACAT3-201ENST00000426539 RAB5AP20339 215 aa6.04□□□□□ -1.44
GACAT3-201ENST00000426539 UBE2D1P51668 147 aa6.04□□□□□ -1.44
GACAT3-201ENST00000426539 ZC2HC1BQ5TFG8 222 aa6.04□□□□□ -1.44
GACAT3-201ENST00000426539 TRBV30A0A0K0K1B3 111 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms