RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 MRAP2Q96G30 205 aa8.13□□□□□ -1.11
VEGFB-202ENST00000426086 SDHAF1A6NFY7 115 aa8.12□□□□□ -1.11
VEGFB-202ENST00000426086 PPP1R17O96001 155 aa8.12□□□□□ -1.11
VEGFB-202ENST00000426086 ESDP10768 282 aa8.12□□□□□ -1.11
VEGFB-202ENST00000426086 ZNF25P17030 456 aaPredicted RBP8.12□□□□□ -1.11
VEGFB-202ENST00000426086 MRPL54Q6P161 138 aaKnown RBP8.12□□□□□ -1.11
VEGFB-202ENST00000426086 OPRPNQ99935 248 aaPredicted RBP8.12□□□□□ -1.11
VEGFB-202ENST00000426086 TRBV24-1A0A075B6N3 115 aa8.11□□□□□ -1.11
VEGFB-202ENST00000426086 TRBV6-5A0A0K0K1A5 114 aa8.11□□□□□ -1.11
VEGFB-202ENST00000426086 APOMO95445 188 aa8.11□□□□□ -1.11
VEGFB-202ENST00000426086 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
VEGFB-202ENST00000426086 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
VEGFB-202ENST00000426086 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
VEGFB-202ENST00000426086 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
VEGFB-202ENST00000426086 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
VEGFB-202ENST00000426086 TSHBP01222 138 aa8.1□□□□□ -1.11
VEGFB-202ENST00000426086 PPBPP02775 128 aa8.1□□□□□ -1.11
VEGFB-202ENST00000426086 SS18Q15532 418 aa8.1□□□□□ -1.11
VEGFB-202ENST00000426086 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
VEGFB-202ENST00000426086 A0A087WZ39 114 aa8.09□□□□□ -1.11
VEGFB-202ENST00000426086 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
VEGFB-202ENST00000426086 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
VEGFB-202ENST00000426086 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
VEGFB-202ENST00000426086 I3L3M4 83 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 PMCHP20382 165 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 CKS2P33552 79 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
VEGFB-202ENST00000426086 TMEM136Q6ZRR5 245 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 YPEL4Q96NS1 127 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 SMCO4Q9NRQ5 59 aa8.08□□□□□ -1.12
VEGFB-202ENST00000426086 PRSS47A8MTI9 375 aa8.07□□□□□ -1.12
VEGFB-202ENST00000426086 RPL32P62910 135 aaKnown RBP8.07□□□□□ -1.12
VEGFB-202ENST00000426086 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
VEGFB-202ENST00000426086 MRPL52Q86TS9 123 aaKnown RBP8.07□□□□□ -1.12
VEGFB-202ENST00000426086 NRACQ8N912 160 aa8.07□□□□□ -1.12
VEGFB-202ENST00000426086 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
VEGFB-202ENST00000426086 LAMTOR2Q9Y2Q5 125 aa8.07□□□□□ -1.12
VEGFB-202ENST00000426086 TRBV27A0A0K0K1C4 114 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 COX7A2LO14548 114 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 MALP21145 153 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 ORMDL3Q8N138 153 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
VEGFB-202ENST00000426086 VCYO14598 125 aa8.05□□□□□ -1.12
VEGFB-202ENST00000426086 TSPAN13O95857 204 aa8.05□□□□□ -1.12
VEGFB-202ENST00000426086 TGIF2-C20orf24A0A0A6YYL0 155 aa8.04□□□□□ -1.12
VEGFB-202ENST00000426086 D6R8Y8 96 aa8.04□□□□□ -1.12
VEGFB-202ENST00000426086 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
VEGFB-202ENST00000426086 UBE2D1P51668 147 aa8.04□□□□□ -1.12
VEGFB-202ENST00000426086 SUMO2P61956 95 aaKnown RBP8.04□□□□□ -1.12
VEGFB-202ENST00000426086 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
VEGFB-202ENST00000426086 FAM19A5Q7Z5A7 132 aaPredicted RBP8.04□□□□□ -1.12
VEGFB-202ENST00000426086 C1orf196B1AJZ1 125 aa8.03□□□□□ -1.12
VEGFB-202ENST00000426086 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
VEGFB-202ENST00000426086 SPAG11BQ08648 103 aa8.03□□□□□ -1.12
VEGFB-202ENST00000426086 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
VEGFB-202ENST00000426086 TRAV13-1A0A0B4J241 112 aa8.02□□□□□ -1.13
VEGFB-202ENST00000426086 TCAPO15273 167 aa8.02□□□□□ -1.13
VEGFB-202ENST00000426086 RNF151Q2KHN1 245 aa8.02□□□□□ -1.13
VEGFB-202ENST00000426086 NPYP01303 97 aa8.01□□□□□ -1.13
VEGFB-202ENST00000426086 MRPL18Q9H0U6 180 aaKnown RBP8.01□□□□□ -1.13
VEGFB-202ENST00000426086 UBE2D4Q9Y2X8 147 aa8.01□□□□□ -1.13
VEGFB-202ENST00000426086 COLCA2A8K830 154 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 K7EMI3 77 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 RPL13AP40429 203 aaKnown RBP8□□□□□ -1.13
VEGFB-202ENST00000426086 FABP9Q0Z7S8 132 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 Q6ZUT4 128 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 CBLN2Q8IUK8 224 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 KIR2DL4Q99706 377 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 ALKBH7Q9BT30 221 aaPredicted RBP8□□□□□ -1.13
VEGFB-202ENST00000426086 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
VEGFB-202ENST00000426086 TRAPPC1Q9Y5R8 145 aa8□□□□□ -1.13
VEGFB-202ENST00000426086 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
VEGFB-202ENST00000426086 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
VEGFB-202ENST00000426086 SMIM2Q9BVW6 85 aa7.99□□□□□ -1.13
VEGFB-202ENST00000426086 C6orf48Q9UBA6 75 aa7.99□□□□□ -1.13
VEGFB-202ENST00000426086 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
VEGFB-202ENST00000426086 M0QXV9 152 aa7.98□□□□□ -1.13
VEGFB-202ENST00000426086 KIAA1644Q3SXP7 199 aa7.98□□□□□ -1.13
VEGFB-202ENST00000426086 ORAOV1Q8WV07 137 aa7.98□□□□□ -1.13
VEGFB-202ENST00000426086 FAM104AQ969W3 186 aa7.98□□□□□ -1.13
VEGFB-202ENST00000426086 MAP1LC3AQ9H492 121 aa7.98□□□□□ -1.13
VEGFB-202ENST00000426086 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
VEGFB-202ENST00000426086 A0A087X002 238 aa7.97□□□□□ -1.13
VEGFB-202ENST00000426086 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
VEGFB-202ENST00000426086 Q8N8P6 123 aa7.97□□□□□ -1.13
VEGFB-202ENST00000426086 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
VEGFB-202ENST00000426086 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
VEGFB-202ENST00000426086 UBE2BP63146 152 aa7.96□□□□□ -1.14
VEGFB-202ENST00000426086 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
VEGFB-202ENST00000426086 NDUFA1O15239 70 aa7.95□□□□□ -1.14
VEGFB-202ENST00000426086 RAB5AP20339 215 aa7.95□□□□□ -1.14
VEGFB-202ENST00000426086 G0S2P27469 103 aa7.95□□□□□ -1.14
VEGFB-202ENST00000426086 FCER1GP30273 86 aa7.95□□□□□ -1.14
VEGFB-202ENST00000426086 SMAGPQ0VAQ4 97 aa7.95□□□□□ -1.14
VEGFB-202ENST00000426086 TMEM18Q96B42 140 aa7.95□□□□□ -1.14
VEGFB-202ENST00000426086 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms