RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CARD19Q96LW7 228 aa14.29□□□□□ -0.12
PTCHD3P2-201ENST00000424937 ALKBH7Q9BT30 221 aaPredicted RBP14.29□□□□□ -0.12
PTCHD3P2-201ENST00000424937 INAFM2P0DMQ5 153 aa14.28□□□□□ -0.12
PTCHD3P2-201ENST00000424937 TEX43Q6ZNM6 134 aa14.28□□□□□ -0.12
PTCHD3P2-201ENST00000424937 PRSS3P2Q8NHM4 247 aa14.28□□□□□ -0.12
PTCHD3P2-201ENST00000424937 APOMO95445 188 aa14.27□□□□□ -0.13
PTCHD3P2-201ENST00000424937 PLA2G1BP04054 148 aaKnown RBP14.27□□□□□ -0.13
PTCHD3P2-201ENST00000424937 COX6A2Q02221 97 aa14.27□□□□□ -0.13
PTCHD3P2-201ENST00000424937 Q6ZN92 141 aa14.27□□□□□ -0.13
PTCHD3P2-201ENST00000424937 IGLV4-69A0A075B6H9 119 aa14.26□□□□□ -0.13
PTCHD3P2-201ENST00000424937 CIRBPQ14011 172 aaKnown RBP14.26□□□□□ -0.13
PTCHD3P2-201ENST00000424937 C2orf88Q9BSF0 95 aa14.26□□□□□ -0.13
PTCHD3P2-201ENST00000424937 IGHV3OR16-9A0A0B4J2B5 98 aa14.25□□□□□ -0.13
PTCHD3P2-201ENST00000424937 G0S2P27469 103 aa14.25□□□□□ -0.13
PTCHD3P2-201ENST00000424937 SYCNQ0VAF6 134 aa14.25□□□□□ -0.13
PTCHD3P2-201ENST00000424937 SPACA4Q8TDM5 124 aa14.25□□□□□ -0.13
PTCHD3P2-201ENST00000424937 SPAG11BQ08648 103 aa14.24□□□□□ -0.13
PTCHD3P2-201ENST00000424937 ZC2HC1BQ5TFG8 222 aa14.24□□□□□ -0.13
PTCHD3P2-201ENST00000424937 DPH3Q96FX2 82 aa14.24□□□□□ -0.13
PTCHD3P2-201ENST00000424937 IGKV2-24A0A0C4DH68 120 aa14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 IGIPA6NJ69 53 aa14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 LINC00242Q5T6M2 205 aa14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 LINC00173Q6ZV60 143 aa14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 TOMM6Q96B49 74 aa14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 TRAPPC1Q9Y5R8 145 aa14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 SRRM2Q9UQ35 2752 aaKnown RBP14.23□□□□□ -0.13
PTCHD3P2-201ENST00000424937 NPSP0C0P6 89 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 UBE2D1P51668 147 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 OR10D4PQ8NGN7 298 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 ORAOV1Q8WV07 137 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 CAMK2N2Q96S95 79 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 AMELXQ99217 191 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 VCX2Q9H322 139 aa14.22□□□□□ -0.13
PTCHD3P2-201ENST00000424937 Q6ZRU5 148 aa14.21□□□□□ -0.13
PTCHD3P2-201ENST00000424937 FA2HQ7L5A8 372 aa14.21□□□□□ -0.13
PTCHD3P2-201ENST00000424937 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
PTCHD3P2-201ENST00000424937 A0A087WYN8 130 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 A0A096LNI7 61 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 LINC01546A6NGU7 62 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 MAJINQ3KP22 176 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 C2orf48Q96LS8 159 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 TIMM17AQ99595 171 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 SMCO4Q9NRQ5 59 aa14.2□□□□□ -0.14
PTCHD3P2-201ENST00000424937 PAPPA-AS1Q5QFB9 102 aa14.19□□□□□ -0.14
PTCHD3P2-201ENST00000424937 FLG2Q5D862 2391 aaPredicted RBP14.18□□□□□ -0.14
PTCHD3P2-201ENST00000424937 SCGB3A1Q96QR1 104 aa14.18□□□□□ -0.14
PTCHD3P2-201ENST00000424937 A0A087WZ39 114 aa14.17□□□□□ -0.14
PTCHD3P2-201ENST00000424937 ERASQ7Z444 233 aa14.16□□□□□ -0.14
PTCHD3P2-201ENST00000424937 SLC7A5P1Q8MH63 180 aa14.16□□□□□ -0.14
PTCHD3P2-201ENST00000424937 PLAC8Q9NZF1 115 aa14.16□□□□□ -0.14
PTCHD3P2-201ENST00000424937 RPL37AP61513 92 aaKnown RBP14.15□□□□□ -0.14
PTCHD3P2-201ENST00000424937 C18orf32Q8TCD1 76 aa14.15□□□□□ -0.14
PTCHD3P2-201ENST00000424937 YPEL4Q96NS1 127 aa14.15□□□□□ -0.14
PTCHD3P2-201ENST00000424937 LOC107984640A0A0U1RRK4 108 aa14.14□□□□□ -0.15
PTCHD3P2-201ENST00000424937 LINC01549A6NIU2 74 aa14.14□□□□□ -0.15
PTCHD3P2-201ENST00000424937 KRTAP10-4P60372 401 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3P2-201ENST00000424937 CBLN2Q8IUK8 224 aa14.13□□□□□ -0.15
PTCHD3P2-201ENST00000424937 STPG4Q8N801 248 aa14.13□□□□□ -0.15
PTCHD3P2-201ENST00000424937 LINC00474Q9P2X8 69 aa14.13□□□□□ -0.15
PTCHD3P2-201ENST00000424937 FAM19A3Q7Z5A8 133 aa14.12□□□□□ -0.15
PTCHD3P2-201ENST00000424937 A0A0J9YXV3 536 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 F8WDY8 70 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 NDUFA1O15239 70 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 SEC11AP67812 179 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 GAGE2BQ13066 116 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 LINC01561Q8N1V8 128 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 URB1-AS1Q96HZ7 61 aa14.11□□□□□ -0.15
PTCHD3P2-201ENST00000424937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3P2-201ENST00000424937 PTTG1IPP53801 180 aa14.1□□□□□ -0.15
PTCHD3P2-201ENST00000424937 HERVK_113P63121 156 aa14.1□□□□□ -0.15
PTCHD3P2-201ENST00000424937 RPL18AQ02543 176 aaKnown RBP14.1□□□□□ -0.15
PTCHD3P2-201ENST00000424937 GEMIN7Q9H840 131 aaKnown RBP14.1□□□□□ -0.15
PTCHD3P2-201ENST00000424937 MRPL35Q9NZE8 188 aaKnown RBP14.1□□□□□ -0.15
PTCHD3P2-201ENST00000424937 RNF151Q2KHN1 245 aa14.09□□□□□ -0.15
PTCHD3P2-201ENST00000424937 LINC00614P0C842 121 aa14.08□□□□□ -0.16
PTCHD3P2-201ENST00000424937 KIAA0087Q14695 138 aa14.08□□□□□ -0.16
PTCHD3P2-201ENST00000424937 C10orf25Q5T742 122 aa14.08□□□□□ -0.16
PTCHD3P2-201ENST00000424937 UNQ6190/PRO20217Q6UXQ8 127 aa14.08□□□□□ -0.16
PTCHD3P2-201ENST00000424937 A0A096LNJ9 63 aa14.07□□□□□ -0.16
PTCHD3P2-201ENST00000424937 PACRGQ96M98 296 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3P2-201ENST00000424937 CDKN2A-AS1Q9UH64 79 aa14.07□□□□□ -0.16
PTCHD3P2-201ENST00000424937 MYCBP2O75592 4640 aa14.07□□□□□ -0.16
PTCHD3P2-201ENST00000424937 PMCHL1Q16048 86 aa14.06□□□□□ -0.16
PTCHD3P2-201ENST00000424937 C7orf33Q8WU49 177 aa14.06□□□□□ -0.16
PTCHD3P2-201ENST00000424937 TOMM7Q9P0U1 55 aa14.06□□□□□ -0.16
PTCHD3P2-201ENST00000424937 C6orf48Q9UBA6 75 aa14.06□□□□□ -0.16
PTCHD3P2-201ENST00000424937 HBDP02042 147 aa14.05□□□□□ -0.16
PTCHD3P2-201ENST00000424937 PRSS2P07478 247 aa14.05□□□□□ -0.16
PTCHD3P2-201ENST00000424937 RAB5BP61020 215 aa14.05□□□□□ -0.16
PTCHD3P2-201ENST00000424937 C2orf82Q6UX34 121 aa14.05□□□□□ -0.16
PTCHD3P2-201ENST00000424937 LINC00469Q8N7U9 141 aa14.05□□□□□ -0.16
PTCHD3P2-201ENST00000424937 CST9LQ9H4G1 147 aa14.05□□□□□ -0.16
PTCHD3P2-201ENST00000424937 PMVKQ15126 192 aa14.04□□□□□ -0.16
PTCHD3P2-201ENST00000424937 TINCRA0A1B0GVN0 87 aa14.03□□□□□ -0.16
PTCHD3P2-201ENST00000424937 PKHD1L1Q86WI1 4243 aa14.03□□□□□ -0.16
PTCHD3P2-201ENST00000424937 Q8IZM0 81 aa14.01□□□□□ -0.17
PTCHD3P2-201ENST00000424937 TRBV30A0A0K0K1B3 111 aa14□□□□□ -0.17
PTCHD3P2-201ENST00000424937 HNRNPA3P51991 378 aaKnown RBP14□□□□□ -0.17
PTCHD3P2-201ENST00000424937 NDUFA6P56556 154 aa14□□□□□ -0.17
PTCHD3P2-201ENST00000424937 CKS1BP61024 79 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms