RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
VRK3-203ENST00000424804 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
VRK3-203ENST00000424804 ZNF561-AS1K7EIQ3 104 aa8.25□□□□□ -1.09
VRK3-203ENST00000424804 COX7A2LO14548 114 aa8.25□□□□□ -1.09
VRK3-203ENST00000424804 ORMDL2Q53FV1 153 aa8.24□□□□□ -1.09
VRK3-203ENST00000424804 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
VRK3-203ENST00000424804 PRSS47A8MTI9 375 aa8.23□□□□□ -1.09
VRK3-203ENST00000424804 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
VRK3-203ENST00000424804 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
VRK3-203ENST00000424804 FABP9Q0Z7S8 132 aa8.23□□□□□ -1.09
VRK3-203ENST00000424804 C2orf66Q6UXQ4 117 aa8.23□□□□□ -1.09
VRK3-203ENST00000424804 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
VRK3-203ENST00000424804 GNB1LQ9BYB4 327 aa8.23□□□□□ -1.09
VRK3-203ENST00000424804 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
VRK3-203ENST00000424804 NXT2Q9NPJ8 142 aaKnown RBP8.23□□□□□ -1.09
VRK3-203ENST00000424804 IGLV4-3A0A075B6K6 122 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 TGIF2-C20orf24A0A0A6YYL0 155 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 SNAPINO95295 136 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 COX6A2Q02221 97 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 COX19Q49B96 90 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 SVBPQ8N300 66 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 CARD19Q96LW7 228 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 LRP2P98164 4655 aa8.22□□□□□ -1.09
VRK3-203ENST00000424804 APOMO95445 188 aa8.21□□□□□ -1.1
VRK3-203ENST00000424804 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
VRK3-203ENST00000424804 Q6ZN92 141 aa8.21□□□□□ -1.1
VRK3-203ENST00000424804 TEX43Q6ZNM6 134 aa8.21□□□□□ -1.1
VRK3-203ENST00000424804 FAM104AQ969W3 186 aa8.21□□□□□ -1.1
VRK3-203ENST00000424804 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
VRK3-203ENST00000424804 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
VRK3-203ENST00000424804 MT-ND6P03923 174 aa8.2□□□□□ -1.1
VRK3-203ENST00000424804 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
VRK3-203ENST00000424804 CAMK2N2Q96S95 79 aa8.2□□□□□ -1.1
VRK3-203ENST00000424804 C2orf88Q9BSF0 95 aa8.2□□□□□ -1.1
VRK3-203ENST00000424804 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
VRK3-203ENST00000424804 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
VRK3-203ENST00000424804 A0A087WYN8 130 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 K7EMI3 77 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 SPAG11BQ08648 103 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 MAJINQ3KP22 176 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 SPACA4Q8TDM5 124 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 ORAOV1Q8WV07 137 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 VCX2Q9H322 139 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 TRAPPC1Q9Y5R8 145 aa8.19□□□□□ -1.1
VRK3-203ENST00000424804 G0S2P27469 103 aa8.18□□□□□ -1.1
VRK3-203ENST00000424804 Q6ZRU5 148 aa8.18□□□□□ -1.1
VRK3-203ENST00000424804 FA2HQ7L5A8 372 aa8.18□□□□□ -1.1
VRK3-203ENST00000424804 SCGB3A1Q96QR1 104 aa8.17□□□□□ -1.1
VRK3-203ENST00000424804 PLAC8Q9NZF1 115 aa8.17□□□□□ -1.1
VRK3-203ENST00000424804 A0A096LNI7 61 aa8.16□□□□□ -1.1
VRK3-203ENST00000424804 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
VRK3-203ENST00000424804 LINC00242Q5T6M2 205 aa8.16□□□□□ -1.1
VRK3-203ENST00000424804 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 IGIPA6NJ69 53 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 UBE2D1P51668 147 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 GAGE2BQ13066 116 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 SLC7A5P1Q8MH63 180 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 STPG4Q8N801 248 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 PKIGQ9Y2B9 76 aa8.15□□□□□ -1.1
VRK3-203ENST00000424804 RPL18AQ02543 176 aaKnown RBP8.14□□□□□ -1.11
VRK3-203ENST00000424804 PAPPA-AS1Q5QFB9 102 aa8.14□□□□□ -1.11
VRK3-203ENST00000424804 C2orf48Q96LS8 159 aa8.14□□□□□ -1.11
VRK3-203ENST00000424804 AMELXQ99217 191 aa8.14□□□□□ -1.11
VRK3-203ENST00000424804 LOC107984640A0A0U1RRK4 108 aa8.13□□□□□ -1.11
VRK3-203ENST00000424804 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
VRK3-203ENST00000424804 TOMM7Q9P0U1 55 aa8.13□□□□□ -1.11
VRK3-203ENST00000424804 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
VRK3-203ENST00000424804 A0A087WZ39 114 aa8.12□□□□□ -1.11
VRK3-203ENST00000424804 NDUFA1O15239 70 aa8.12□□□□□ -1.11
VRK3-203ENST00000424804 ERASQ7Z444 233 aa8.12□□□□□ -1.11
VRK3-203ENST00000424804 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
VRK3-203ENST00000424804 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
VRK3-203ENST00000424804 GEMIN7Q9H840 131 aaKnown RBP8.12□□□□□ -1.11
VRK3-203ENST00000424804 NPSP0C0P6 89 aa8.11□□□□□ -1.11
VRK3-203ENST00000424804 NDUFA6P56556 154 aa8.11□□□□□ -1.11
VRK3-203ENST00000424804 PACRGQ96M98 296 aaPredicted RBP8.11□□□□□ -1.11
VRK3-203ENST00000424804 PRSS2P07478 247 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 HERVK_113P63121 156 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 ODF1Q14990 250 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 PMCHL1Q16048 86 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 UNQ6190/PRO20217Q6UXQ8 127 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
VRK3-203ENST00000424804 LINC01546A6NGU7 62 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
VRK3-203ENST00000424804 LINC00614P0C842 121 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 SEC11AP67812 179 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 LINC00469Q8N7U9 141 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
VRK3-203ENST00000424804 LINC01549A6NIU2 74 aa8.08□□□□□ -1.12
VRK3-203ENST00000424804 RAB5BP61020 215 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms