RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PYY3Q5JQD4 70 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 STPG4Q8N801 248 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 F8VRH5 84 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 PKIAP61925 76 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.98
PRPF39-202ENST00000424478 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
PRPF39-202ENST00000424478 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
PRPF39-202ENST00000424478 SPINK8P0C7L1 97 aa8.95□□□□□ -0.98
PRPF39-202ENST00000424478 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
PRPF39-202ENST00000424478 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
PRPF39-202ENST00000424478 WFDC2Q14508 124 aa8.95□□□□□ -0.98
PRPF39-202ENST00000424478 TRAV12-1A0A0B4J245 112 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 LINC01549A6NIU2 74 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 MIAQ16674 131 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 KRTAP26-1Q6PEX3 210 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 LCE6AA0A183 80 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 PET117Q6UWS5 81 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 Q6ZR54 194 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 C10orf126Q8N4M7 172 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
PRPF39-202ENST00000424478 FOXI1Q12951 378 aa8.94□□□□□ -0.98
PRPF39-202ENST00000424478 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
PRPF39-202ENST00000424478 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
PRPF39-202ENST00000424478 DPM2O94777 84 aa8.93□□□□□ -0.98
PRPF39-202ENST00000424478 IGKCP01834 107 aa8.93□□□□□ -0.98
PRPF39-202ENST00000424478 TP73-AS1Q9UF72 201 aa8.93□□□□□ -0.98
PRPF39-202ENST00000424478 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
PRPF39-202ENST00000424478 HIGD2BQ4VC39 106 aa8.92□□□□□ -0.98
PRPF39-202ENST00000424478 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 PSCAO43653 123 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 DNAH17Q9UFH2 4485 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 NPSP0C0P6 89 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 TTC32Q5I0X7 151 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 CD164L2Q6UWJ8 174 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
PRPF39-202ENST00000424478 FAT2Q9NYQ8 4349 aa8.9□□□□□ -0.98
PRPF39-202ENST00000424478 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
PRPF39-202ENST00000424478 HERVK_113P63121 156 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
PRPF39-202ENST00000424478 NFE4Q86UQ8 179 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 C6orf223Q8N319 242 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 TRAV8-4A0A0B4J246 113 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 C20orf202A1L168 122 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 COX7A2LO14548 114 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 MALP21145 153 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 ANKRD39Q53RE8 183 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
PRPF39-202ENST00000424478 PLNP26678 52 aa8.88□□□□□ -0.99
PRPF39-202ENST00000424478 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
PRPF39-202ENST00000424478 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
PRPF39-202ENST00000424478 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
PRPF39-202ENST00000424478 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
PRPF39-202ENST00000424478 C15orf56Q8N910 161 aa8.87□□□□□ -0.99
PRPF39-202ENST00000424478 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
PRPF39-202ENST00000424478 A0A087WZ39 114 aa8.87□□□□□ -0.99
PRPF39-202ENST00000424478 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
PRPF39-202ENST00000424478 C2orf82Q6UX34 121 aa8.87□□□□□ -0.99
PRPF39-202ENST00000424478 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
PRPF39-202ENST00000424478 RTL8CO15255 209 aa8.86□□□□□ -0.99
PRPF39-202ENST00000424478 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
PRPF39-202ENST00000424478 ORAOV1Q8WV07 137 aa8.86□□□□□ -0.99
PRPF39-202ENST00000424478 IGLV5-45A0A087WSX0 123 aa8.86□□□□□ -0.99
PRPF39-202ENST00000424478 TNP2Q05952 138 aa8.86□□□□□ -0.99
PRPF39-202ENST00000424478 NMUP48645 174 aa8.85□□□□□ -0.99
PRPF39-202ENST00000424478 ZNF625Q96I27 306 aaPredicted RBP8.85□□□□□ -0.99
PRPF39-202ENST00000424478 SEC11AP67812 179 aa8.85□□□□□ -0.99
PRPF39-202ENST00000424478 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
PRPF39-202ENST00000424478 K7EP13 123 aa8.84□□□□□ -0.99
PRPF39-202ENST00000424478 RMI2Q96E14 147 aa8.84□□□□□ -0.99
PRPF39-202ENST00000424478 DNAH11Q96DT5 4516 aa8.84□□□□□ -0.99
PRPF39-202ENST00000424478 PKD1P98161 4303 aa8.83□□□□□ -1
PRPF39-202ENST00000424478 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
PRPF39-202ENST00000424478 PCP2Q8IVA1 136 aa8.83□□□□□ -1
PRPF39-202ENST00000424478 PKHD1P08F94 4074 aa8.83□□□□□ -1
PRPF39-202ENST00000424478 H3BRM9 83 aa8.83□□□□□ -1
PRPF39-202ENST00000424478 SPAG11BQ08648 103 aa8.83□□□□□ -1
PRPF39-202ENST00000424478 LRCOL1A6NCL2 159 aa8.82□□□□□ -1
PRPF39-202ENST00000424478 C10orf25Q5T742 122 aa8.82□□□□□ -1
PRPF39-202ENST00000424478 TM2D2Q9BX73 214 aa8.82□□□□□ -1
PRPF39-202ENST00000424478 SLPIP03973 132 aa8.82□□□□□ -1
PRPF39-202ENST00000424478 C14orf144Q96I85 54 aa8.82□□□□□ -1
PRPF39-202ENST00000424478 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
PRPF39-202ENST00000424478 VAMP8Q9BV40 100 aa8.81□□□□□ -1
PRPF39-202ENST00000424478 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
PRPF39-202ENST00000424478 A0A0U1RRA0 63 aa8.81□□□□□ -1
PRPF39-202ENST00000424478 SPATA45Q537H7 98 aa8.81□□□□□ -1
PRPF39-202ENST00000424478 KIAA0087Q14695 138 aa8.81□□□□□ -1
PRPF39-202ENST00000424478 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
PRPF39-202ENST00000424478 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
PRPF39-202ENST00000424478 COX7B2Q8TF08 81 aa8.8□□□□□ -1
PRPF39-202ENST00000424478 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
PRPF39-202ENST00000424478 A0A087WTM6 91 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 C12orf57Q99622 126 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 PRO1933Q9H354 126 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 J3QQQ9 107 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 HSBP1L1C9JCN9 74 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms