RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 B4DSR2 109 aa11.82□□□□□ -0.52
NPC1L1-203ENST00000423141 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
NPC1L1-203ENST00000423141 CRYGAP11844 174 aa11.82□□□□□ -0.52
NPC1L1-203ENST00000423141 GNLYP22749 145 aa11.82□□□□□ -0.52
NPC1L1-203ENST00000423141 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
NPC1L1-203ENST00000423141 ZNF702PQ9H963 129 aa11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 ATOX1O00244 68 aa11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 Q6ZTI0 123 aa11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 CENPEQ02224 2701 aa11.81□□□□□ -0.52
NPC1L1-203ENST00000423141 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 FBN2P35556 2912 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 J3KT08 172 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 K7EQD1 137 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 PF4P02776 101 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 CFAP46Q8IYW2 2715 aa11.8□□□□□ -0.52
NPC1L1-203ENST00000423141 NCR3O14931 201 aa11.79□□□□□ -0.52
NPC1L1-203ENST00000423141 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
NPC1L1-203ENST00000423141 A0A1B0GX51 115 aa11.79□□□□□ -0.52
NPC1L1-203ENST00000423141 SLPIP03973 132 aa11.79□□□□□ -0.52
NPC1L1-203ENST00000423141 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-203ENST00000423141 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
NPC1L1-203ENST00000423141 COX7B2Q8TF08 81 aa11.78□□□□□ -0.52
NPC1L1-203ENST00000423141 LECT2O14960 151 aa11.78□□□□□ -0.52
NPC1L1-203ENST00000423141 LINC00158P58513 81 aa11.78□□□□□ -0.52
NPC1L1-203ENST00000423141 LRRC75A-AS1Q8N1F1 130 aa11.78□□□□□ -0.52
NPC1L1-203ENST00000423141 CCL18P55774 89 aa11.77□□□□□ -0.52
NPC1L1-203ENST00000423141 KIR2DL5BQ8NHK3 375 aa11.76□□□□□ -0.53
NPC1L1-203ENST00000423141 UBE2L6O14933 153 aa11.76□□□□□ -0.53
NPC1L1-203ENST00000423141 DYNLRB2Q8TF09 96 aa11.76□□□□□ -0.53
NPC1L1-203ENST00000423141 OBSCN-AS1Q96MR7 158 aa11.76□□□□□ -0.53
NPC1L1-203ENST00000423141 LOC100131303A0A0U1RQF7 123 aa11.75□□□□□ -0.53
NPC1L1-203ENST00000423141 KHDC1LQ5JSQ8 128 aa11.75□□□□□ -0.53
NPC1L1-203ENST00000423141 LINC01561Q8N1V8 128 aa11.75□□□□□ -0.53
NPC1L1-203ENST00000423141 IL17DQ8TAD2 202 aa11.75□□□□□ -0.53
NPC1L1-203ENST00000423141 PFN2P35080 140 aa11.75□□□□□ -0.53
NPC1L1-203ENST00000423141 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
NPC1L1-203ENST00000423141 TRBV10-1A0A0K0K1A3 114 aa11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 Q6JHZ5 121 aa11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 ODF3L2Q3SX64 289 aa11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 OVOL2Q9BRP0 275 aa11.74□□□□□ -0.53
NPC1L1-203ENST00000423141 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
NPC1L1-203ENST00000423141 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
NPC1L1-203ENST00000423141 SMIM9A6NGZ8 99 aa11.72□□□□□ -0.53
NPC1L1-203ENST00000423141 OR13C6PQ8NH95 151 aa11.72□□□□□ -0.53
NPC1L1-203ENST00000423141 SETXQ7Z333 2677 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-203ENST00000423141 SS18Q15532 418 aa11.72□□□□□ -0.53
NPC1L1-203ENST00000423141 SERP2Q8N6R1 65 aa11.72□□□□□ -0.53
NPC1L1-203ENST00000423141 NOP10Q9NPE3 64 aaKnown RBP11.72□□□□□ -0.53
NPC1L1-203ENST00000423141 TEX15Q9BXT5 2789 aa11.71□□□□□ -0.53
NPC1L1-203ENST00000423141 IGLV4-60A0A075B6I1 120 aa11.71□□□□□ -0.53
NPC1L1-203ENST00000423141 USP17L23D6RBM5 183 aa11.71□□□□□ -0.53
NPC1L1-203ENST00000423141 H0YGX0 51 aa11.71□□□□□ -0.53
NPC1L1-203ENST00000423141 PAX4O43316 350 aa11.71□□□□□ -0.53
NPC1L1-203ENST00000423141 DOPEY1Q5JWR5 2465 aa11.71□□□□□ -0.54
NPC1L1-203ENST00000423141 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.54
NPC1L1-203ENST00000423141 STHQ8IWL8 128 aa11.7□□□□□ -0.54
NPC1L1-203ENST00000423141 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
NPC1L1-203ENST00000423141 DSCR8Q96T75 97 aa11.7□□□□□ -0.54
NPC1L1-203ENST00000423141 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 NF1P21359 2839 aa11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 OXTP01178 125 aa11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 HILS1P60008 231 aa11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 Q6YL49 198 aa11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 WFDC9Q8NEX5 89 aa11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
NPC1L1-203ENST00000423141 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
NPC1L1-203ENST00000423141 RPS28P62857 69 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-203ENST00000423141 C5orf47Q569G3 176 aa11.68□□□□□ -0.54
NPC1L1-203ENST00000423141 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
NPC1L1-203ENST00000423141 MYO18BQ8IUG5 2567 aa11.66□□□□□ -0.54
NPC1L1-203ENST00000423141 IBA57-AS1B1ANH7 110 aa11.66□□□□□ -0.54
NPC1L1-203ENST00000423141 TMEM258P61165 79 aa11.66□□□□□ -0.54
NPC1L1-203ENST00000423141 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
NPC1L1-203ENST00000423141 ORMDL1Q9P0S3 153 aa11.65□□□□□ -0.54
NPC1L1-203ENST00000423141 TRBV6-4A0A1B0GX49 114 aa11.65□□□□□ -0.55
NPC1L1-203ENST00000423141 PKD1L2Q7Z442 2459 aa11.64□□□□□ -0.55
NPC1L1-203ENST00000423141 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
NPC1L1-203ENST00000423141 LRRK2Q5S007 2527 aa11.64□□□□□ -0.55
NPC1L1-203ENST00000423141 A0A096LNT2 108 aa11.64□□□□□ -0.55
NPC1L1-203ENST00000423141 PRR3P79522 188 aaKnown RBP11.64□□□□□ -0.55
NPC1L1-203ENST00000423141 A0A087WZ39 114 aa11.63□□□□□ -0.55
NPC1L1-203ENST00000423141 CCKP06307 115 aa11.63□□□□□ -0.55
NPC1L1-203ENST00000423141 C11orf44Q8N8P7 122 aa11.63□□□□□ -0.55
NPC1L1-203ENST00000423141 ZNF469Q96JG9 3925 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-203ENST00000423141 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
NPC1L1-203ENST00000423141 ACACBO00763 2458 aa11.62□□□□□ -0.55
NPC1L1-203ENST00000423141 LY6G6DO95868 133 aa11.62□□□□□ -0.55
NPC1L1-203ENST00000423141 PTPN13Q12923 2485 aa11.62□□□□□ -0.55
NPC1L1-203ENST00000423141 FHL2Q14192 279 aa11.62□□□□□ -0.55
NPC1L1-203ENST00000423141 SONP18583 2426 aaKnown RBP11.61□□□□□ -0.55
NPC1L1-203ENST00000423141 FAM19A1Q7Z5A9 133 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms