RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 MAJINQ3KP22 176 aa13.93□□□□□ -0.18
TRAF4-204ENST00000422344 IGLV4-69A0A075B6H9 119 aa13.92□□□□□ -0.18
TRAF4-204ENST00000422344 TRAV9-1A0A075B6T8 112 aa13.92□□□□□ -0.18
TRAF4-204ENST00000422344 KRTAP10-4P60372 401 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-204ENST00000422344 FAM104AQ969W3 186 aa13.91□□□□□ -0.18
TRAF4-204ENST00000422344 PYGO1Q9Y3Y4 419 aa13.91□□□□□ -0.18
TRAF4-204ENST00000422344 UBR4Q5T4S7 5183 aa13.9□□□□□ -0.18
TRAF4-204ENST00000422344 ORMDL2Q53FV1 153 aa13.9□□□□□ -0.18
TRAF4-204ENST00000422344 CAMK2N2Q96S95 79 aa13.9□□□□□ -0.18
TRAF4-204ENST00000422344 PLAC8Q9NZF1 115 aa13.9□□□□□ -0.18
TRAF4-204ENST00000422344 LINC00474Q9P2X8 69 aa13.9□□□□□ -0.18
TRAF4-204ENST00000422344 CYSLTR1Q9Y271 337 aa13.9□□□□□ -0.18
TRAF4-204ENST00000422344 FAT3Q8TDW7 4589 aa13.9□□□□□ -0.19
TRAF4-204ENST00000422344 K7EMI3 77 aa13.89□□□□□ -0.19
TRAF4-204ENST00000422344 NXT2Q9NPJ8 142 aaKnown RBP13.89□□□□□ -0.19
TRAF4-204ENST00000422344 A0A096LNI7 61 aa13.88□□□□□ -0.19
TRAF4-204ENST00000422344 SPAG11BQ08648 103 aa13.88□□□□□ -0.19
TRAF4-204ENST00000422344 C2orf66Q6UXQ4 117 aa13.88□□□□□ -0.19
TRAF4-204ENST00000422344 TMEM141Q96I45 108 aa13.88□□□□□ -0.19
TRAF4-204ENST00000422344 IGLV4-3A0A075B6K6 122 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 TGIF2-C20orf24A0A0A6YYL0 155 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 Q6ZN92 141 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 STPG4Q8N801 248 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 OR10D4PQ8NGN7 298 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 C7orf33Q8WU49 177 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 C2orf48Q96LS8 159 aa13.87□□□□□ -0.19
TRAF4-204ENST00000422344 KIAA1644Q3SXP7 199 aa13.86□□□□□ -0.19
TRAF4-204ENST00000422344 TEX43Q6ZNM6 134 aa13.86□□□□□ -0.19
TRAF4-204ENST00000422344 Q6ZRU5 148 aa13.86□□□□□ -0.19
TRAF4-204ENST00000422344 ORAOV1Q8WV07 137 aa13.86□□□□□ -0.19
TRAF4-204ENST00000422344 C2orf88Q9BSF0 95 aa13.86□□□□□ -0.19
TRAF4-204ENST00000422344 IGHV3OR16-9A0A0B4J2B5 98 aa13.85□□□□□ -0.19
TRAF4-204ENST00000422344 LOC107984640A0A0U1RRK4 108 aa13.84□□□□□ -0.19
TRAF4-204ENST00000422344 OXTP01178 125 aa13.84□□□□□ -0.19
TRAF4-204ENST00000422344 G0S2P27469 103 aa13.84□□□□□ -0.19
TRAF4-204ENST00000422344 RHEBQ15382 184 aa13.84□□□□□ -0.19
TRAF4-204ENST00000422344 COX19Q49B96 90 aa13.83□□□□□ -0.2
TRAF4-204ENST00000422344 C10orf91Q5T1B1 145 aa13.83□□□□□ -0.2
TRAF4-204ENST00000422344 GNB1LQ9BYB4 327 aa13.83□□□□□ -0.2
TRAF4-204ENST00000422344 RPS10P5Q9NQ39 176 aa13.83□□□□□ -0.2
TRAF4-204ENST00000422344 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.2
TRAF4-204ENST00000422344 GAGE2BQ13066 116 aa13.82□□□□□ -0.2
TRAF4-204ENST00000422344 VCX2Q9H322 139 aa13.82□□□□□ -0.2
TRAF4-204ENST00000422344 PLA2G2DQ9UNK4 145 aa13.82□□□□□ -0.2
TRAF4-204ENST00000422344 LINC00242Q5T6M2 205 aa13.81□□□□□ -0.2
TRAF4-204ENST00000422344 PKHD1L1Q86WI1 4243 aa13.8□□□□□ -0.2
TRAF4-204ENST00000422344 F8WDY8 70 aa13.8□□□□□ -0.2
TRAF4-204ENST00000422344 NPSP0C0P6 89 aa13.8□□□□□ -0.2
TRAF4-204ENST00000422344 PTTG1IPP53801 180 aa13.8□□□□□ -0.2
TRAF4-204ENST00000422344 MT-ND6P03923 174 aa13.79□□□□□ -0.2
TRAF4-204ENST00000422344 UBE2D1P51668 147 aa13.79□□□□□ -0.2
TRAF4-204ENST00000422344 PAPPA-AS1Q5QFB9 102 aa13.79□□□□□ -0.2
TRAF4-204ENST00000422344 A0A087WZ39 114 aa13.78□□□□□ -0.2
TRAF4-204ENST00000422344 NDUFA1O15239 70 aa13.78□□□□□ -0.2
TRAF4-204ENST00000422344 RPL18AQ02543 176 aaKnown RBP13.78□□□□□ -0.2
TRAF4-204ENST00000422344 RNF151Q2KHN1 245 aa13.78□□□□□ -0.2
TRAF4-204ENST00000422344 IGIPA6NJ69 53 aa13.77□□□□□ -0.21
TRAF4-204ENST00000422344 HNRNPA3P51991 378 aaKnown RBP13.77□□□□□ -0.21
TRAF4-204ENST00000422344 AMELXQ99217 191 aa13.77□□□□□ -0.21
TRAF4-204ENST00000422344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-204ENST00000422344 FABP9Q0Z7S8 132 aa13.76□□□□□ -0.21
TRAF4-204ENST00000422344 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
TRAF4-204ENST00000422344 ALKBH7Q9BT30 221 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-204ENST00000422344 MRPL18Q9H0U6 180 aaKnown RBP13.76□□□□□ -0.21
TRAF4-204ENST00000422344 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
TRAF4-204ENST00000422344 A0A0J9YXV3 536 aa13.75□□□□□ -0.21
TRAF4-204ENST00000422344 NDUFA5Q16718 116 aa13.75□□□□□ -0.21
TRAF4-204ENST00000422344 LINC00173Q6ZV60 143 aa13.75□□□□□ -0.21
TRAF4-204ENST00000422344 TOMM6Q96B49 74 aa13.75□□□□□ -0.21
TRAF4-204ENST00000422344 TIMM17AQ99595 171 aa13.75□□□□□ -0.21
TRAF4-204ENST00000422344 APOC3P02656 99 aa13.74□□□□□ -0.21
TRAF4-204ENST00000422344 SEC11AP67812 179 aa13.73□□□□□ -0.21
TRAF4-204ENST00000422344 LINC01561Q8N1V8 128 aa13.73□□□□□ -0.21
TRAF4-204ENST00000422344 SCGB3A1Q96QR1 104 aa13.73□□□□□ -0.21
TRAF4-204ENST00000422344 LINC01549A6NIU2 74 aa13.72□□□□□ -0.21
TRAF4-204ENST00000422344 FA2HQ7L5A8 372 aa13.72□□□□□ -0.21
TRAF4-204ENST00000422344 ERASQ7Z444 233 aa13.72□□□□□ -0.21
TRAF4-204ENST00000422344 SMCO4Q9NRQ5 59 aa13.72□□□□□ -0.21
TRAF4-204ENST00000422344 SNAPINO95295 136 aa13.71□□□□□ -0.21
TRAF4-204ENST00000422344 UNQ6190/PRO20217Q6UXQ8 127 aa13.71□□□□□ -0.21
TRAF4-204ENST00000422344 PRSS2P07478 247 aa13.7□□□□□ -0.22
TRAF4-204ENST00000422344 HERVK_113P63121 156 aa13.7□□□□□ -0.22
TRAF4-204ENST00000422344 PRR3P79522 188 aaKnown RBP13.7□□□□□ -0.22
TRAF4-204ENST00000422344 C10orf25Q5T742 122 aa13.7□□□□□ -0.22
TRAF4-204ENST00000422344 SVBPQ8N300 66 aa13.7□□□□□ -0.22
TRAF4-204ENST00000422344 GEMIN7Q9H840 131 aaKnown RBP13.7□□□□□ -0.22
TRAF4-204ENST00000422344 KIAA0087Q14695 138 aa13.69□□□□□ -0.22
TRAF4-204ENST00000422344 FAM19A3Q7Z5A8 133 aa13.69□□□□□ -0.22
TRAF4-204ENST00000422344 C6orf48Q9UBA6 75 aa13.69□□□□□ -0.22
TRAF4-204ENST00000422344 LINC01546A6NGU7 62 aa13.68□□□□□ -0.22
TRAF4-204ENST00000422344 C9orf116Q5BN46 136 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-204ENST00000422344 PACRGQ96M98 296 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-204ENST00000422344 TOMM7Q9P0U1 55 aa13.68□□□□□ -0.22
TRAF4-204ENST00000422344 TRAPPC1Q9Y5R8 145 aa13.68□□□□□ -0.22
TRAF4-204ENST00000422344 A0A1W2PNN7 141 aa13.67□□□□□ -0.22
TRAF4-204ENST00000422344 TRBV30A0A0K0K1B3 111 aa13.66□□□□□ -0.22
TRAF4-204ENST00000422344 TLX1NBP0CAT3 122 aa13.66□□□□□ -0.22
TRAF4-204ENST00000422344 C2orf82Q6UX34 121 aa13.66□□□□□ -0.22
TRAF4-204ENST00000422344 CKS1BP61024 79 aa13.65□□□□□ -0.22
TRAF4-204ENST00000422344 Q6ZRP5 223 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms