RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PSG8Q9UQ74 426 aa2.8□□□□□ -1.96
SFXN1-202ENST00000421887 IGHV1-58A0A0C4DH39 117 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 M0R036 132 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 SMIM17P0DL12 118 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 BCL2P10415 239 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 UBE2BP63146 152 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 FLI1Q01543 452 aaPredicted RBP2.79□□□□□ -1.96
SFXN1-202ENST00000421887 ASB16-AS1Q495Z4 193 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 AMMECR1LQ6DCA0 310 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 LINC00526Q96FQ7 95 aa2.79□□□□□ -1.96
SFXN1-202ENST00000421887 SDHCQ99643 169 aaPredicted RBP2.79□□□□□ -1.96
SFXN1-202ENST00000421887 RPP21Q9H633 154 aaKnown RBP2.79□□□□□ -1.96
SFXN1-202ENST00000421887 RSL24D1Q9UHA3 163 aaKnown RBP2.79□□□□□ -1.96
SFXN1-202ENST00000421887 GRIFINA4D1Z8 144 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 K7EN84 100 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 M0R2T5 61 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 GATCO43716 136 aaKnown RBP2.78□□□□□ -1.96
SFXN1-202ENST00000421887 APOMO95445 188 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 TCRAP04437 139 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 TMBIM6P55061 237 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 HERVK_113P61574 105 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 C5orf17Q8NAS9 161 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
SFXN1-202ENST00000421887 IGLV4-69A0A075B6H9 119 aa2.77□□□□□ -1.97
SFXN1-202ENST00000421887 TMSB15BA0A087X1C1 80 aa2.77□□□□□ -1.97
SFXN1-202ENST00000421887 XCL1P47992 114 aa2.77□□□□□ -1.97
SFXN1-202ENST00000421887 DNLZQ5SXM8 178 aa2.77□□□□□ -1.97
SFXN1-202ENST00000421887 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
SFXN1-202ENST00000421887 CAMK2N2Q96S95 79 aa2.77□□□□□ -1.97
SFXN1-202ENST00000421887 ZNF471Q9BX82 626 aaPredicted RBP2.77□□□□□ -1.97
SFXN1-202ENST00000421887 IGHV3OR16-9A0A0B4J2B5 98 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 A0A1B0GVG6 124 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 IGSF23A1L1A6 192 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 KRBOX1C9JBD0 128 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 SNAI2O43623 268 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 ZNF861PO60384 105 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 UPK1BO75841 260 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 RPL12P30050 165 aaKnown RBP2.76□□□□□ -1.97
SFXN1-202ENST00000421887 NMUP48645 174 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 MT1HP80294 61 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 SPANXN1Q5VSR9 72 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 FAM19A5Q7Z5A7 132 aaPredicted RBP2.76□□□□□ -1.97
SFXN1-202ENST00000421887 DEDD2Q8WXF8 326 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 ARL2-SNX15V9GYD0 113 aa2.76□□□□□ -1.97
SFXN1-202ENST00000421887 A0A087WXM4 84 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 C19orf71A6NCJ1 209 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 CCL25O15444 150 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 MGPP08493 103 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 OR5AL1P0C617 328 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 CTRLP40313 264 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 CXCL5P42830 114 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 UBE2AP49459 152 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 NKX2-5P52952 324 aaPredicted RBP2.75□□□□□ -1.97
SFXN1-202ENST00000421887 SS18Q15532 418 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 PYDC2Q56P42 97 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 NUP35Q8NFH5 326 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 OR5A1Q8NGJ0 315 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 SCGB1C1Q8TD33 95 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 BTF3L4Q96K17 158 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 WDR61Q9GZS3 305 aaKnown RBP2.75□□□□□ -1.97
SFXN1-202ENST00000421887 MED28Q9H204 178 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 EPDR1Q9UM22 224 aa2.75□□□□□ -1.97
SFXN1-202ENST00000421887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.74□□□□□ -1.97
SFXN1-202ENST00000421887 M0QXV9 152 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 HMGB3O15347 200 aaKnown RBP2.74□□□□□ -1.97
SFXN1-202ENST00000421887 SH2D1AO60880 128 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 NDUFB6O95139 128 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 DEFA3P59666 94 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 CTAG1AP78358 180 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 MEF2BQ02080 365 aaPredicted RBP2.74□□□□□ -1.97
SFXN1-202ENST00000421887 ORMDL2Q53FV1 153 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 C5orf47Q569G3 176 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 FP248Q71RG6 208 aaPredicted RBP2.74□□□□□ -1.97
SFXN1-202ENST00000421887 OR10AG1Q8NH19 301 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 AP1S3Q96PC3 154 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 IMMP2LQ96T52 175 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
SFXN1-202ENST00000421887 SMIM26A0A096LP01 95 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 IGKV2D-26A0A0A0MRZ7 120 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 NUPR1O60356 82 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 ARL14EPLP0DKL9 152 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 ESDP10768 282 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 RPL28P46779 137 aaKnown RBP2.73□□□□□ -1.97
SFXN1-202ENST00000421887 C11orf1Q9H5F2 150 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 UBE2D4Q9Y2X8 147 aa2.73□□□□□ -1.97
SFXN1-202ENST00000421887 MUC21A0A140T8X8 626 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 NAP1L6A6NFF2 107 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 M0QY20 66 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 COX7A2LO14548 114 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 ZNF25P17030 456 aaPredicted RBP2.72□□□□□ -1.97
SFXN1-202ENST00000421887 CDC34P49427 236 aaPredicted RBP2.72□□□□□ -1.97
SFXN1-202ENST00000421887 UBE2G1P62253 170 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 Q86TA4 180 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 SLC7A5P1Q8MH63 180 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 OR2D3Q8NGH3 330 aa2.72□□□□□ -1.97
SFXN1-202ENST00000421887 TIMM17AQ99595 171 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms