RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 NDUFA13Q9P0J0 144 aa3.83□□□□□ -1.8
PMS1-208ENST00000421722 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
PMS1-208ENST00000421722 ALG5Q9Y673 324 aa3.83□□□□□ -1.8
PMS1-208ENST00000421722 RAB19A4D1S5 217 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 BCE1O60756 84 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 POLR2KP53803 58 aaKnown RBP3.82□□□□□ -1.8
PMS1-208ENST00000421722 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 CTDSP1Q9GZU7 261 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 TP73-AS1Q9UF72 201 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 TRBV27A0A0K0K1C4 114 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 CCL20P78556 96 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 KCNRGQ8N5I3 272 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 LINC00337Q8N6G1 96 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 PACRGQ96M98 296 aaPredicted RBP3.82□□□□□ -1.8
PMS1-208ENST00000421722 GAGE2DQ9UEU5 116 aa3.82□□□□□ -1.8
PMS1-208ENST00000421722 UMAD1C9J7I0 102 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 C10orf25Q5T742 122 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 SPAG11AQ6PDA7 123 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 TMEM18Q96B42 140 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 MANBALQ9NQG1 85 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 UBE2D4Q9Y2X8 147 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 TNFRSF6BO95407 300 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 GIPP09681 153 aaPredicted RBP3.81□□□□□ -1.8
PMS1-208ENST00000421722 C9orf129Q5T035 196 aaKnown RBP3.81□□□□□ -1.8
PMS1-208ENST00000421722 LINC01561Q8N1V8 128 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 SFT2D1Q8WV19 159 aa3.81□□□□□ -1.8
PMS1-208ENST00000421722 TRAV13-1A0A0B4J241 112 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 IGHV3OR16-9A0A0B4J2B5 98 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 VCYO14598 125 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 GNG4P50150 75 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 DEFA1P59665 94 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
PMS1-208ENST00000421722 PPP1R17O96001 155 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 NUDT10Q8NFP7 164 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 NUDT11Q96G61 164 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 TCAPO15273 167 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 FCER1GP30273 86 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
PMS1-208ENST00000421722 A0A1B0GVG6 124 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 MRPS36P82909 103 aaKnown RBP3.78□□□□□ -1.8
PMS1-208ENST00000421722 IFITM3Q01628 133 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 Q6ZUT4 128 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 FAM213BQ8TBF2 198 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 PPP1R2P9O14990 202 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 PDE6DO43924 150 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
PMS1-208ENST00000421722 FXYD6-FXYD2A0A087WZ82 144 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 FOXA3P55318 350 aaPredicted RBP3.77□□□□□ -1.81
PMS1-208ENST00000421722 Q5BKY6 102 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 RNASE7Q9H1E1 156 aaKnown RBP3.77□□□□□ -1.81
PMS1-208ENST00000421722 SPANXA1Q9NS26 97 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 TGIF2-C20orf24A0A0A6YYL0 155 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 ZNF727A8MUV8 499 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 RPL32P62910 135 aaKnown RBP3.77□□□□□ -1.81
PMS1-208ENST00000421722 HBBP68871 147 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 MRPL55Q7Z7F7 128 aaKnown RBP3.77□□□□□ -1.81
PMS1-208ENST00000421722 BORCS7Q96B45 105 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 KIR2DL4Q99706 377 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 TMEM191AQ9H0A3 160 aa3.77□□□□□ -1.81
PMS1-208ENST00000421722 MT1HP80294 61 aa3.76□□□□□ -1.81
PMS1-208ENST00000421722 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
PMS1-208ENST00000421722 A8MWL6 223 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 IGLV5-37A0A075B6J1 123 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 TEX46H3BTG2 121 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 GATCO43716 136 aaKnown RBP3.75□□□□□ -1.81
PMS1-208ENST00000421722 RAB4AP20338 218 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 UBE2AP49459 152 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 CT83Q5H943 113 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 MED9Q9NWA0 146 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 GNG13Q9P2W3 67 aa3.75□□□□□ -1.81
PMS1-208ENST00000421722 A0A1B0GV50 99 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 IFITM10A6NMD0 228 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 TAGLN2P37802 199 aaKnown RBP3.74□□□□□ -1.81
PMS1-208ENST00000421722 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
PMS1-208ENST00000421722 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
PMS1-208ENST00000421722 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 FAM231DQ6ZW35 169 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 TRBV20OR9-2A0A075B6H5 130 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 NRACQ8N912 160 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 FAM104AQ969W3 186 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 LINC00167Q96N53 147 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 C20orf78Q9BR46 151 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 GNB1LQ9BYB4 327 aa3.74□□□□□ -1.81
PMS1-208ENST00000421722 ZNF345Q14585 488 aa3.73□□□□□ -1.81
PMS1-208ENST00000421722 A0A1B0GUT8 65 aa3.73□□□□□ -1.81
PMS1-208ENST00000421722 C2orf82Q6UX34 121 aa3.73□□□□□ -1.81
PMS1-208ENST00000421722 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
PMS1-208ENST00000421722 K7EN84 100 aa3.72□□□□□ -1.81
PMS1-208ENST00000421722 PRSS2P07478 247 aa3.72□□□□□ -1.81
PMS1-208ENST00000421722 Q6ZN92 141 aa3.72□□□□□ -1.81
PMS1-208ENST00000421722 OCC1Q8TAD7 63 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms