RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 WFDC2Q14508 124 aa11.58□□□□□ -0.56
LINC00271-201ENST00000421378 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
LINC00271-201ENST00000421378 USP17L23D6RBM5 183 aa11.57□□□□□ -0.56
LINC00271-201ENST00000421378 A0A0J9YXV3 536 aa11.56□□□□□ -0.56
LINC00271-201ENST00000421378 HERVK_113P63121 156 aa11.56□□□□□ -0.56
LINC00271-201ENST00000421378 COX6A2Q02221 97 aa11.56□□□□□ -0.56
LINC00271-201ENST00000421378 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
LINC00271-201ENST00000421378 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
LINC00271-201ENST00000421378 GEMIN7Q9H840 131 aaKnown RBP11.56□□□□□ -0.56
LINC00271-201ENST00000421378 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
LINC00271-201ENST00000421378 H0Y8G0 127 aa11.55□□□□□ -0.56
LINC00271-201ENST00000421378 MALP21145 153 aa11.55□□□□□ -0.56
LINC00271-201ENST00000421378 TINCRA0A1B0GVN0 87 aa11.54□□□□□ -0.56
LINC00271-201ENST00000421378 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
LINC00271-201ENST00000421378 Q8N814 137 aa11.54□□□□□ -0.56
LINC00271-201ENST00000421378 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
LINC00271-201ENST00000421378 MAP1LC3CQ9BXW4 147 aa11.54□□□□□ -0.56
LINC00271-201ENST00000421378 A0A087WZ39 114 aa11.53□□□□□ -0.56
LINC00271-201ENST00000421378 C15orf56Q8N910 161 aa11.53□□□□□ -0.56
LINC00271-201ENST00000421378 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
LINC00271-201ENST00000421378 CHTOPQ9Y3Y2 248 aaKnown RBP11.53□□□□□ -0.56
LINC00271-201ENST00000421378 IGLV4-69A0A075B6H9 119 aa11.52□□□□□ -0.57
LINC00271-201ENST00000421378 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
LINC00271-201ENST00000421378 IGLC3P0DOY3 106 aa11.52□□□□□ -0.57
LINC00271-201ENST00000421378 HIST3H2BBQ8N257 126 aa11.52□□□□□ -0.57
LINC00271-201ENST00000421378 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.57
LINC00271-201ENST00000421378 CDKN2A-AS1Q9UH64 79 aa11.52□□□□□ -0.57
LINC00271-201ENST00000421378 A0A1B0GVY2 172 aa11.51□□□□□ -0.57
LINC00271-201ENST00000421378 F8VRH5 84 aa11.51□□□□□ -0.57
LINC00271-201ENST00000421378 APOMO95445 188 aa11.51□□□□□ -0.57
LINC00271-201ENST00000421378 S100A2P29034 98 aa11.51□□□□□ -0.57
LINC00271-201ENST00000421378 IGLV5-45A0A087WSX0 123 aa11.5□□□□□ -0.57
LINC00271-201ENST00000421378 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
LINC00271-201ENST00000421378 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
LINC00271-201ENST00000421378 ODF1Q14990 250 aa11.5□□□□□ -0.57
LINC00271-201ENST00000421378 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.5□□□□□ -0.57
LINC00271-201ENST00000421378 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
LINC00271-201ENST00000421378 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
LINC00271-201ENST00000421378 MRPL35Q9NZE8 188 aaKnown RBP11.5□□□□□ -0.57
LINC00271-201ENST00000421378 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
LINC00271-201ENST00000421378 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
LINC00271-201ENST00000421378 PKD1P98161 4303 aa11.48□□□□□ -0.57
LINC00271-201ENST00000421378 C11orf86A6NJI1 115 aa11.48□□□□□ -0.57
LINC00271-201ENST00000421378 SYS1-DBNDD2H3BUS1 97 aa11.48□□□□□ -0.57
LINC00271-201ENST00000421378 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
LINC00271-201ENST00000421378 LINC01561Q8N1V8 128 aa11.48□□□□□ -0.57
LINC00271-201ENST00000421378 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
LINC00271-201ENST00000421378 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
LINC00271-201ENST00000421378 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
LINC00271-201ENST00000421378 H3BRM9 83 aa11.47□□□□□ -0.57
LINC00271-201ENST00000421378 ZNF561-AS1K7EIQ3 104 aa11.47□□□□□ -0.57
LINC00271-201ENST00000421378 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
LINC00271-201ENST00000421378 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
LINC00271-201ENST00000421378 ORAOV1Q8WV07 137 aa11.47□□□□□ -0.57
LINC00271-201ENST00000421378 TMA7Q9Y2S6 64 aaKnown RBP11.47□□□□□ -0.57
LINC00271-201ENST00000421378 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
LINC00271-201ENST00000421378 C3orf79P0CE67 100 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 FUSP35637 526 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00271-201ENST00000421378 KRTDAPP60985 99 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 SPAG11BQ08648 103 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 PLNP26678 52 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 LINC00526Q96FQ7 95 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 PMCHL2Q9BQD1 86 aa11.45□□□□□ -0.58
LINC00271-201ENST00000421378 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
LINC00271-201ENST00000421378 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
LINC00271-201ENST00000421378 PET117Q6UWS5 81 aa11.44□□□□□ -0.58
LINC00271-201ENST00000421378 PKHD1P08F94 4074 aa11.43□□□□□ -0.58
LINC00271-201ENST00000421378 DPM2O94777 84 aa11.43□□□□□ -0.58
LINC00271-201ENST00000421378 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
LINC00271-201ENST00000421378 LINC01545Q5VT33 79 aa11.42□□□□□ -0.58
LINC00271-201ENST00000421378 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
LINC00271-201ENST00000421378 IGKCP01834 107 aa11.41□□□□□ -0.58
LINC00271-201ENST00000421378 SLPIP03973 132 aa11.41□□□□□ -0.58
LINC00271-201ENST00000421378 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
LINC00271-201ENST00000421378 PRSS2P07478 247 aa11.41□□□□□ -0.58
LINC00271-201ENST00000421378 KIAA0087Q14695 138 aa11.4□□□□□ -0.58
LINC00271-201ENST00000421378 Q8IZM0 81 aa11.4□□□□□ -0.58
LINC00271-201ENST00000421378 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
LINC00271-201ENST00000421378 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
LINC00271-201ENST00000421378 C20orf202A1L168 122 aa11.39□□□□□ -0.59
LINC00271-201ENST00000421378 IGLV5-39A0A0G2JS06 123 aa11.38□□□□□ -0.59
LINC00271-201ENST00000421378 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
LINC00271-201ENST00000421378 C16orf90A8MZG2 172 aa11.38□□□□□ -0.59
LINC00271-201ENST00000421378 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
LINC00271-201ENST00000421378 C6orf226Q5I0X4 101 aa11.38□□□□□ -0.59
LINC00271-201ENST00000421378 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
LINC00271-201ENST00000421378 F8WDY8 70 aa11.37□□□□□ -0.59
LINC00271-201ENST00000421378 COX7B2Q8TF08 81 aa11.37□□□□□ -0.59
LINC00271-201ENST00000421378 NDUFA1O15239 70 aa11.37□□□□□ -0.59
LINC00271-201ENST00000421378 CKS1BP61024 79 aa11.37□□□□□ -0.59
LINC00271-201ENST00000421378 C9orf163Q8N9P6 203 aa11.37□□□□□ -0.59
LINC00271-201ENST00000421378 GCSHP23434 173 aa11.36□□□□□ -0.59
LINC00271-201ENST00000421378 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
LINC00271-201ENST00000421378 C2orf82Q6UX34 121 aa11.36□□□□□ -0.59
LINC00271-201ENST00000421378 Q6ZRU5 148 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms