RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GEMIN7Q9H840 131 aaKnown RBP9.62□□□□□ -0.87
SHMT1P1-201ENST00000419974 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
SHMT1P1-201ENST00000419974 H3BRM9 83 aa9.61□□□□□ -0.87
SHMT1P1-201ENST00000419974 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
SHMT1P1-201ENST00000419974 A0A087WZ39 114 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 TRAV8-3A0A0A6YYJ7 113 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 IGHV3-30P01768 117 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 IGHV3-33P01772 117 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 IGHV3-30-3P0DP02 117 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 IGHV3-30-5P0DP03 117 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 HERVK_113P61574 105 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 COX6A2Q02221 97 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
SHMT1P1-201ENST00000419974 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
SHMT1P1-201ENST00000419974 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
SHMT1P1-201ENST00000419974 CRPP02741 224 aa9.59□□□□□ -0.87
SHMT1P1-201ENST00000419974 TMEM170BQ5T4T1 132 aa9.59□□□□□ -0.87
SHMT1P1-201ENST00000419974 STPG4Q8N801 248 aa9.59□□□□□ -0.87
SHMT1P1-201ENST00000419974 DLEU1O43261 78 aa9.58□□□□□ -0.88
SHMT1P1-201ENST00000419974 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
SHMT1P1-201ENST00000419974 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
SHMT1P1-201ENST00000419974 LINC00469Q8N7U9 141 aa9.58□□□□□ -0.88
SHMT1P1-201ENST00000419974 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
SHMT1P1-201ENST00000419974 IGHV1-58A0A0C4DH39 117 aa9.57□□□□□ -0.88
SHMT1P1-201ENST00000419974 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
SHMT1P1-201ENST00000419974 KRTAP26-1Q6PEX3 210 aa9.57□□□□□ -0.88
SHMT1P1-201ENST00000419974 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
SHMT1P1-201ENST00000419974 UBE2WQ96B02 151 aa9.57□□□□□ -0.88
SHMT1P1-201ENST00000419974 PAM16Q9Y3D7 125 aa9.57□□□□□ -0.88
SHMT1P1-201ENST00000419974 LEPROTO15243 131 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 FOXI1Q12951 378 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 EPPK1P58107 5090 aaKnown RBP9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 COX8AP10176 69 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 LINC00476Q8WZB0 136 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 PLEKHB2Q96CS7 222 aa9.56□□□□□ -0.88
SHMT1P1-201ENST00000419974 COX7A2LO14548 114 aa9.55□□□□□ -0.88
SHMT1P1-201ENST00000419974 XCL1P47992 114 aa9.55□□□□□ -0.88
SHMT1P1-201ENST00000419974 RMI2Q96E14 147 aa9.55□□□□□ -0.88
SHMT1P1-201ENST00000419974 IGKV2D-26A0A0A0MRZ7 120 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 NMUP48645 174 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 SFTA2Q6UW10 78 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 C1orf43Q9BWL3 253 aa9.54□□□□□ -0.88
SHMT1P1-201ENST00000419974 NBDYA0A0U1RRE5 68 aa9.52□□□□□ -0.89
SHMT1P1-201ENST00000419974 TSTD3H0UI37 97 aa9.52□□□□□ -0.89
SHMT1P1-201ENST00000419974 J3QQQ9 107 aa9.52□□□□□ -0.89
SHMT1P1-201ENST00000419974 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
SHMT1P1-201ENST00000419974 UQCR10Q9UDW1 63 aa9.52□□□□□ -0.89
SHMT1P1-201ENST00000419974 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
SHMT1P1-201ENST00000419974 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
SHMT1P1-201ENST00000419974 APOMO95445 188 aa9.51□□□□□ -0.89
SHMT1P1-201ENST00000419974 SLC25A34Q6PIV7 304 aa9.51□□□□□ -0.89
SHMT1P1-201ENST00000419974 Q8IZM0 81 aa9.51□□□□□ -0.89
SHMT1P1-201ENST00000419974 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
SHMT1P1-201ENST00000419974 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
SHMT1P1-201ENST00000419974 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
SHMT1P1-201ENST00000419974 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
SHMT1P1-201ENST00000419974 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
SHMT1P1-201ENST00000419974 TM2D2Q9BX73 214 aa9.5□□□□□ -0.89
SHMT1P1-201ENST00000419974 KMT2AQ03164 3969 aa9.5□□□□□ -0.89
SHMT1P1-201ENST00000419974 MYMXA0A1B0GTQ4 84 aa9.49□□□□□ -0.89
SHMT1P1-201ENST00000419974 F8WDY8 70 aa9.49□□□□□ -0.89
SHMT1P1-201ENST00000419974 LY6G6CO95867 125 aa9.49□□□□□ -0.89
SHMT1P1-201ENST00000419974 Q6ZR54 194 aa9.49□□□□□ -0.89
SHMT1P1-201ENST00000419974 PCP2Q8IVA1 136 aa9.49□□□□□ -0.89
SHMT1P1-201ENST00000419974 BIRC6Q9NR09 4857 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 LGALS3P17931 250 aaKnown RBP9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 CXCL5P42830 114 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 KIAA0087Q14695 138 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 CFAP161Q6P656 301 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 C14orf144Q96I85 54 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
SHMT1P1-201ENST00000419974 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
SHMT1P1-201ENST00000419974 NDUFA1O15239 70 aa9.47□□□□□ -0.89
SHMT1P1-201ENST00000419974 MALP21145 153 aa9.47□□□□□ -0.89
SHMT1P1-201ENST00000419974 COX7B2Q8TF08 81 aa9.47□□□□□ -0.89
SHMT1P1-201ENST00000419974 DNAH2Q9P225 4427 aa9.46□□□□□ -0.9
SHMT1P1-201ENST00000419974 HERV-K104P63124 156 aa9.46□□□□□ -0.9
SHMT1P1-201ENST00000419974 MAPKAPK5-AS1Q8N8E1 139 aa9.46□□□□□ -0.9
SHMT1P1-201ENST00000419974 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
SHMT1P1-201ENST00000419974 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
SHMT1P1-201ENST00000419974 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
SHMT1P1-201ENST00000419974 PRO1933Q9H354 126 aa9.45□□□□□ -0.9
SHMT1P1-201ENST00000419974 GVQW2A0A096LPI5 108 aaPredicted RBP9.44□□□□□ -0.9
SHMT1P1-201ENST00000419974 TIMM17BO60830 172 aa9.44□□□□□ -0.9
SHMT1P1-201ENST00000419974 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
SHMT1P1-201ENST00000419974 Q9HAA7 133 aa9.44□□□□□ -0.9
SHMT1P1-201ENST00000419974 LINC00587B1AMM8 73 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 PRSS2P07478 247 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 DDTP30046 118 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 C15orf56Q8N910 161 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms