RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 COA6Q5JTJ3 125 aaKnown RBP5.67□□□□□ -1.5
TRIM48-201ENST00000417545 ZC2HC1BQ5TFG8 222 aa5.67□□□□□ -1.5
TRIM48-201ENST00000417545 PACRGQ96M98 296 aaPredicted RBP5.67□□□□□ -1.5
TRIM48-201ENST00000417545 CHTOPQ9Y3Y2 248 aaKnown RBP5.67□□□□□ -1.5
TRIM48-201ENST00000417545 COX7A2LO14548 114 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 APOMO95445 188 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 KRTDAPP60985 99 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 SNRPEP62304 92 aaKnown RBP5.66□□□□□ -1.5
TRIM48-201ENST00000417545 HERVK_113P63121 156 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 CFAP161Q6P656 301 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 CD164L2Q6UWJ8 174 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 AMELXQ99217 191 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 CST9LQ9H4G1 147 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
TRIM48-201ENST00000417545 A0A0J9YXV3 536 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 C20orf202A1L168 122 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 PRSS29PA6NIE9 313 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 UBE2D1P51668 147 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 C14orf177Q52M58 125 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 LINC00469Q8N7U9 141 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 CHAC1Q9BUX1 264 aa5.65□□□□□ -1.5
TRIM48-201ENST00000417545 DNAH1Q9P2D7 4330 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 TRAV12-1A0A0B4J245 112 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 H3BRM9 83 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 LECT2O14960 151 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 LINC00173Q6ZV60 143 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 C5orf38Q86SI9 138 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 VPS13DQ5THJ4 4388 aa5.65□□□□□ -1.51
TRIM48-201ENST00000417545 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
TRIM48-201ENST00000417545 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
TRIM48-201ENST00000417545 F8VRH5 84 aa5.64□□□□□ -1.51
TRIM48-201ENST00000417545 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
TRIM48-201ENST00000417545 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
TRIM48-201ENST00000417545 LINC00242Q5T6M2 205 aa5.64□□□□□ -1.51
TRIM48-201ENST00000417545 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 USP17L23D6RBM5 183 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 RTL8CO15255 209 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 PRSS2P07478 247 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 PLNP26678 52 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 FOXI1Q12951 378 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
TRIM48-201ENST00000417545 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
TRIM48-201ENST00000417545 SYS1-DBNDD2H3BUS1 97 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 DPM2O94777 84 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 IGLC3P0DOY3 106 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 AKR1D1P51857 326 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 HERVK_113P61574 105 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 PET117Q6UWS5 81 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 ORAOV1Q8WV07 137 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 HIST1H2BLQ99880 126 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 MRPL35Q9NZE8 188 aaKnown RBP5.62□□□□□ -1.51
TRIM48-201ENST00000417545 TOMM7Q9P0U1 55 aa5.62□□□□□ -1.51
TRIM48-201ENST00000417545 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.61□□□□□ -1.51
TRIM48-201ENST00000417545 A0A087WTM6 91 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 C5orf52A6NGY3 159 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 C11orf86A6NJI1 115 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 IGKCP01834 107 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 COX6A2Q02221 97 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 SPAG11BQ08648 103 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 ODF1Q14990 250 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 FAM19A3Q7Z5A8 133 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
TRIM48-201ENST00000417545 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 IGHV3-64A0A075B6Q5 118 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 A0A087WZ39 114 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.6□□□□□ -1.51
TRIM48-201ENST00000417545 IGHV3OR16-9A0A0B4J2B5 98 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 SPINK8P0C7L1 97 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 OR10D4PQ8NGN7 298 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 KMT2AQ03164 3969 aa5.6□□□□□ -1.51
TRIM48-201ENST00000417545 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
TRIM48-201ENST00000417545 CKS1BP61024 79 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 C6orf226Q5I0X4 101 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 LINC01561Q8N1V8 128 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 Q8N814 137 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 MAPKAPK5-AS1Q8N8E1 139 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 RYR2Q92736 4967 aa5.59□□□□□ -1.51
TRIM48-201ENST00000417545 IGLV5-52A0A0A0MRZ9 124 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 SCGB1D1O95968 90 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 WFDC2Q14508 124 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 LINC01545Q5VT33 79 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 SPATA12Q7Z6I5 190 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 CAMK2N2Q96S95 79 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 SACSQ9NZJ4 4579 aa5.58□□□□□ -1.52
TRIM48-201ENST00000417545 IGLV5-45A0A087WSX0 123 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
TRIM48-201ENST00000417545 SMIM1B2RUZ4 78 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 HSBP1L1C9JCN9 74 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 NDUFA1O15239 70 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms