RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 K7EMI3 77 aa12.27□□□□□ -0.45
CCDC148-204ENST00000417066 COX7A2LO14548 114 aa12.27□□□□□ -0.45
CCDC148-204ENST00000417066 TMEM141Q96I45 108 aa12.27□□□□□ -0.45
CCDC148-204ENST00000417066 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
CCDC148-204ENST00000417066 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
CCDC148-204ENST00000417066 MALP21145 153 aa12.26□□□□□ -0.45
CCDC148-204ENST00000417066 TRAPPC1Q9Y5R8 145 aa12.26□□□□□ -0.45
CCDC148-204ENST00000417066 IGIPA6NJ69 53 aa12.24□□□□□ -0.45
CCDC148-204ENST00000417066 IGHV3OR16-9A0A0B4J2B5 98 aa12.23□□□□□ -0.45
CCDC148-204ENST00000417066 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
CCDC148-204ENST00000417066 YPEL4Q96NS1 127 aa12.23□□□□□ -0.45
CCDC148-204ENST00000417066 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 FAM229AH3BQW9 127 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 CHTF8P0CG12 524 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 COX6A2Q02221 97 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 TEX43Q6ZNM6 134 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 LINC00173Q6ZV60 143 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 TOMM6Q96B49 74 aa12.22□□□□□ -0.45
CCDC148-204ENST00000417066 LINC00242Q5T6M2 205 aa12.21□□□□□ -0.45
CCDC148-204ENST00000417066 CBLN2Q8IUK8 224 aa12.21□□□□□ -0.45
CCDC148-204ENST00000417066 LINC00528Q8N1L1 170 aa12.21□□□□□ -0.45
CCDC148-204ENST00000417066 LINC01546A6NGU7 62 aa12.2□□□□□ -0.46
CCDC148-204ENST00000417066 Q6ZN92 141 aa12.2□□□□□ -0.46
CCDC148-204ENST00000417066 AMELXQ99217 191 aa12.2□□□□□ -0.46
CCDC148-204ENST00000417066 VCX2Q9H322 139 aa12.2□□□□□ -0.46
CCDC148-204ENST00000417066 UBE2D1P51668 147 aa12.2□□□□□ -0.46
CCDC148-204ENST00000417066 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
CCDC148-204ENST00000417066 G0S2P27469 103 aa12.19□□□□□ -0.46
CCDC148-204ENST00000417066 SYCNQ0VAF6 134 aa12.19□□□□□ -0.46
CCDC148-204ENST00000417066 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
CCDC148-204ENST00000417066 C2orf88Q9BSF0 95 aa12.19□□□□□ -0.46
CCDC148-204ENST00000417066 APOMO95445 188 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 NPSP0C0P6 89 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 CIRBPQ14011 172 aaKnown RBP12.18□□□□□ -0.46
CCDC148-204ENST00000417066 Q6ZRU5 148 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 C18orf32Q8TCD1 76 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 SCGB3A1Q96QR1 104 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
CCDC148-204ENST00000417066 SPAG11BQ08648 103 aa12.17□□□□□ -0.46
CCDC148-204ENST00000417066 ERASQ7Z444 233 aa12.17□□□□□ -0.46
CCDC148-204ENST00000417066 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
CCDC148-204ENST00000417066 SMCO4Q9NRQ5 59 aa12.17□□□□□ -0.46
CCDC148-204ENST00000417066 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
CCDC148-204ENST00000417066 SPACA4Q8TDM5 124 aa12.16□□□□□ -0.46
CCDC148-204ENST00000417066 CAMK2N2Q96S95 79 aa12.16□□□□□ -0.46
CCDC148-204ENST00000417066 VPS13BQ7Z7G8 4022 aa12.15□□□□□ -0.46
CCDC148-204ENST00000417066 A0A087WZ39 114 aa12.15□□□□□ -0.46
CCDC148-204ENST00000417066 A0A087WYN8 130 aa12.14□□□□□ -0.47
CCDC148-204ENST00000417066 A0A096LNI7 61 aa12.14□□□□□ -0.47
CCDC148-204ENST00000417066 INAFM2P0DMQ5 153 aa12.14□□□□□ -0.47
CCDC148-204ENST00000417066 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
CCDC148-204ENST00000417066 LINC00614P0C842 121 aa12.13□□□□□ -0.47
CCDC148-204ENST00000417066 MAJINQ3KP22 176 aa12.13□□□□□ -0.47
CCDC148-204ENST00000417066 PAPPA-AS1Q5QFB9 102 aa12.13□□□□□ -0.47
CCDC148-204ENST00000417066 A0A096LNJ9 63 aa12.12□□□□□ -0.47
CCDC148-204ENST00000417066 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
CCDC148-204ENST00000417066 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
CCDC148-204ENST00000417066 PMCHL1Q16048 86 aa12.11□□□□□ -0.47
CCDC148-204ENST00000417066 PLA2G1BP04054 148 aaKnown RBP12.11□□□□□ -0.47
CCDC148-204ENST00000417066 FAM19A3Q7Z5A8 133 aa12.11□□□□□ -0.47
CCDC148-204ENST00000417066 KIAA0087Q14695 138 aa12.1□□□□□ -0.47
CCDC148-204ENST00000417066 C10orf25Q5T742 122 aa12.1□□□□□ -0.47
CCDC148-204ENST00000417066 SRRM2Q9UQ35 2752 aaKnown RBP12.09□□□□□ -0.47
CCDC148-204ENST00000417066 FLG2Q5D862 2391 aaPredicted RBP12.09□□□□□ -0.47
CCDC148-204ENST00000417066 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
CCDC148-204ENST00000417066 KRTAP10-4P60372 401 aaPredicted RBP12.09□□□□□ -0.47
CCDC148-204ENST00000417066 UNQ6190/PRO20217Q6UXQ8 127 aa12.09□□□□□ -0.47
CCDC148-204ENST00000417066 CDKN2A-AS1Q9UH64 79 aa12.09□□□□□ -0.47
CCDC148-204ENST00000417066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.08□□□□□ -0.48
CCDC148-204ENST00000417066 J3QL48 77 aa12.08□□□□□ -0.48
CCDC148-204ENST00000417066 GAGE2BQ13066 116 aa12.08□□□□□ -0.48
CCDC148-204ENST00000417066 STPG4Q8N801 248 aa12.08□□□□□ -0.48
CCDC148-204ENST00000417066 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
CCDC148-204ENST00000417066 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
CCDC148-204ENST00000417066 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
CCDC148-204ENST00000417066 LOC107984640A0A0U1RRK4 108 aa12.07□□□□□ -0.48
CCDC148-204ENST00000417066 HERVK_113P63121 156 aa12.07□□□□□ -0.48
CCDC148-204ENST00000417066 NDUFA1O15239 70 aa12.06□□□□□ -0.48
CCDC148-204ENST00000417066 TRGC2P03986 189 aa12.06□□□□□ -0.48
CCDC148-204ENST00000417066 SEC11AP67812 179 aa12.06□□□□□ -0.48
CCDC148-204ENST00000417066 C2orf82Q6UX34 121 aa12.06□□□□□ -0.48
CCDC148-204ENST00000417066 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
CCDC148-204ENST00000417066 HBDP02042 147 aa12.05□□□□□ -0.48
CCDC148-204ENST00000417066 PTTG1IPP53801 180 aa12.05□□□□□ -0.48
CCDC148-204ENST00000417066 RAB5BP61020 215 aa12.05□□□□□ -0.48
CCDC148-204ENST00000417066 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
CCDC148-204ENST00000417066 PMVKQ15126 192 aa12.05□□□□□ -0.48
CCDC148-204ENST00000417066 MRPL35Q9NZE8 188 aaKnown RBP12.05□□□□□ -0.48
CCDC148-204ENST00000417066 TOMM7Q9P0U1 55 aa12.04□□□□□ -0.48
CCDC148-204ENST00000417066 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
CCDC148-204ENST00000417066 PKIGQ9Y2B9 76 aa12.04□□□□□ -0.48
CCDC148-204ENST00000417066 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
CCDC148-204ENST00000417066 F8WDY8 70 aa12.03□□□□□ -0.48
CCDC148-204ENST00000417066 NDUFA6P56556 154 aa12.03□□□□□ -0.48
CCDC148-204ENST00000417066 RPL18AQ02543 176 aaKnown RBP12.03□□□□□ -0.48
CCDC148-204ENST00000417066 RNF151Q2KHN1 245 aa12.03□□□□□ -0.48
CCDC148-204ENST00000417066 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
CCDC148-204ENST00000417066 LINC00469Q8N7U9 141 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms