RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
SEC22C-204ENST00000416880 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
SEC22C-204ENST00000416880 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
SEC22C-204ENST00000416880 LINC01600Q96MT4 127 aa8.53□□□□□ -1.04
SEC22C-204ENST00000416880 LAMTOR2Q9Y2Q5 125 aa8.53□□□□□ -1.04
SEC22C-204ENST00000416880 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
SEC22C-204ENST00000416880 PNRC1Q12796 327 aaPredicted RBP8.52□□□□□ -1.05
SEC22C-204ENST00000416880 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
SEC22C-204ENST00000416880 PYGO1Q9Y3Y4 419 aa8.52□□□□□ -1.05
SEC22C-204ENST00000416880 IFI27P40305 119 aaPredicted RBP8.51□□□□□ -1.05
SEC22C-204ENST00000416880 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
SEC22C-204ENST00000416880 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
SEC22C-204ENST00000416880 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
SEC22C-204ENST00000416880 ANAPC16Q96DE5 110 aa8.51□□□□□ -1.05
SEC22C-204ENST00000416880 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
SEC22C-204ENST00000416880 IMMP2LQ96T52 175 aa8.51□□□□□ -1.05
SEC22C-204ENST00000416880 MRPL35Q9NZE8 188 aaKnown RBP8.51□□□□□ -1.05
SEC22C-204ENST00000416880 IFITM10A6NMD0 228 aa8.5□□□□□ -1.05
SEC22C-204ENST00000416880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
SEC22C-204ENST00000416880 MT-ND4LP03901 98 aa8.5□□□□□ -1.05
SEC22C-204ENST00000416880 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
SEC22C-204ENST00000416880 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
SEC22C-204ENST00000416880 RAB14P61106 215 aa8.49□□□□□ -1.05
SEC22C-204ENST00000416880 ORAOV1Q8WV07 137 aa8.49□□□□□ -1.05
SEC22C-204ENST00000416880 OPRPNQ99935 248 aaPredicted RBP8.49□□□□□ -1.05
SEC22C-204ENST00000416880 TGIF2-C20orf24A0A0A6YYL0 155 aa8.48□□□□□ -1.05
SEC22C-204ENST00000416880 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
SEC22C-204ENST00000416880 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
SEC22C-204ENST00000416880 NDUFA1O15239 70 aa8.48□□□□□ -1.05
SEC22C-204ENST00000416880 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
SEC22C-204ENST00000416880 A0A087WZ39 114 aa8.47□□□□□ -1.05
SEC22C-204ENST00000416880 K7EMI3 77 aa8.47□□□□□ -1.05
SEC22C-204ENST00000416880 NPSP0C0P6 89 aa8.47□□□□□ -1.05
SEC22C-204ENST00000416880 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
SEC22C-204ENST00000416880 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
SEC22C-204ENST00000416880 TMEM141Q96I45 108 aa8.47□□□□□ -1.05
SEC22C-204ENST00000416880 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
SEC22C-204ENST00000416880 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.06
SEC22C-204ENST00000416880 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 G0S2P27469 103 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 ORMDL2Q53FV1 153 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 TEX43Q6ZNM6 134 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 Q8N8P6 123 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
SEC22C-204ENST00000416880 LOC389332A0A1B0GUA5 103 aa8.44□□□□□ -1.06
SEC22C-204ENST00000416880 MT-ND6P03923 174 aa8.44□□□□□ -1.06
SEC22C-204ENST00000416880 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
SEC22C-204ENST00000416880 Q6ZN92 141 aa8.44□□□□□ -1.06
SEC22C-204ENST00000416880 C2orf88Q9BSF0 95 aa8.44□□□□□ -1.06
SEC22C-204ENST00000416880 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
SEC22C-204ENST00000416880 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
SEC22C-204ENST00000416880 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
SEC22C-204ENST00000416880 VCX2Q9H322 139 aa8.43□□□□□ -1.06
SEC22C-204ENST00000416880 NXT2Q9NPJ8 142 aaKnown RBP8.43□□□□□ -1.06
SEC22C-204ENST00000416880 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
SEC22C-204ENST00000416880 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
SEC22C-204ENST00000416880 UBE2D1P51668 147 aa8.42□□□□□ -1.06
SEC22C-204ENST00000416880 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
SEC22C-204ENST00000416880 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
SEC22C-204ENST00000416880 AMELXQ99217 191 aa8.42□□□□□ -1.06
SEC22C-204ENST00000416880 C6orf48Q9UBA6 75 aa8.42□□□□□ -1.06
SEC22C-204ENST00000416880 SEC11AP67812 179 aa8.41□□□□□ -1.06
SEC22C-204ENST00000416880 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
SEC22C-204ENST00000416880 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
SEC22C-204ENST00000416880 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
SEC22C-204ENST00000416880 C1orf137Q5JT78 98 aa8.4□□□□□ -1.06
SEC22C-204ENST00000416880 CLLU1Q5K131 121 aa8.4□□□□□ -1.06
SEC22C-204ENST00000416880 PACRGQ96M98 296 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-204ENST00000416880 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
SEC22C-204ENST00000416880 IGIPA6NJ69 53 aa8.39□□□□□ -1.07
SEC22C-204ENST00000416880 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
SEC22C-204ENST00000416880 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
SEC22C-204ENST00000416880 TNXBP22105 4242 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 PRSS2P07478 247 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 LINC00173Q6ZV60 143 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 DIRC1Q969H9 104 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
SEC22C-204ENST00000416880 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
SEC22C-204ENST00000416880 HERVK_113P63121 156 aa8.37□□□□□ -1.07
SEC22C-204ENST00000416880 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
SEC22C-204ENST00000416880 Q8IZM0 81 aa8.37□□□□□ -1.07
SEC22C-204ENST00000416880 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
SEC22C-204ENST00000416880 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
SEC22C-204ENST00000416880 CKS1BP61024 79 aa8.36□□□□□ -1.07
SEC22C-204ENST00000416880 ODF1Q14990 250 aa8.36□□□□□ -1.07
SEC22C-204ENST00000416880 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
SEC22C-204ENST00000416880 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
SEC22C-204ENST00000416880 TMEM218A2RU14 115 aa8.35□□□□□ -1.07
SEC22C-204ENST00000416880 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
SEC22C-204ENST00000416880 COX19Q49B96 90 aa8.34□□□□□ -1.07
SEC22C-204ENST00000416880 ZC2HC1BQ5TFG8 222 aa8.34□□□□□ -1.07
SEC22C-204ENST00000416880 ERASQ7Z444 233 aa8.34□□□□□ -1.07
SEC22C-204ENST00000416880 ALKBH7Q9BT30 221 aaPredicted RBP8.34□□□□□ -1.07
SEC22C-204ENST00000416880 GEMIN7Q9H840 131 aaKnown RBP8.34□□□□□ -1.07
SEC22C-204ENST00000416880 M0QXV9 152 aa8.33□□□□□ -1.08
SEC22C-204ENST00000416880 S100PP25815 95 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms