RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RPL23P62829 140 aaKnown RBP8.87□□□□□ -0.99
PAF1-202ENST00000416728 FAM74A3Q4VXF1 159 aa8.87□□□□□ -0.99
PAF1-202ENST00000416728 OR10D4PQ8NGN7 298 aa8.87□□□□□ -0.99
PAF1-202ENST00000416728 OPRPNQ99935 248 aaPredicted RBP8.87□□□□□ -0.99
PAF1-202ENST00000416728 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 CKS2P33552 79 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 RAB14P61106 215 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 ADIRFQ15847 76 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 RNF151Q2KHN1 245 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 RNF213Q63HN8 5207 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 A0A1B0GW15 77 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 SCO1O75880 301 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
PAF1-202ENST00000416728 RPL32P62910 135 aaKnown RBP8.86□□□□□ -0.99
PAF1-202ENST00000416728 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
PAF1-202ENST00000416728 ORAOV1Q8WV07 137 aa8.86□□□□□ -0.99
PAF1-202ENST00000416728 SMIM27A0A1W2PRY6 76 aa8.85□□□□□ -0.99
PAF1-202ENST00000416728 TNFRSF6BO95407 300 aa8.85□□□□□ -0.99
PAF1-202ENST00000416728 C1orf137Q5JT78 98 aa8.85□□□□□ -0.99
PAF1-202ENST00000416728 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
PAF1-202ENST00000416728 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
PAF1-202ENST00000416728 MRPL35Q9NZE8 188 aaKnown RBP8.85□□□□□ -0.99
PAF1-202ENST00000416728 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
PAF1-202ENST00000416728 F8WDY8 70 aa8.84□□□□□ -0.99
PAF1-202ENST00000416728 IMMP2LQ96T52 175 aa8.84□□□□□ -0.99
PAF1-202ENST00000416728 IGHV3OR16-9A0A0B4J2B5 98 aa8.83□□□□□ -1
PAF1-202ENST00000416728 NDUFA1O15239 70 aa8.83□□□□□ -1
PAF1-202ENST00000416728 SNAPINO95295 136 aa8.83□□□□□ -1
PAF1-202ENST00000416728 S100A8P05109 93 aa8.83□□□□□ -1
PAF1-202ENST00000416728 HBBP68871 147 aa8.83□□□□□ -1
PAF1-202ENST00000416728 IFITM10A6NMD0 228 aa8.82□□□□□ -1
PAF1-202ENST00000416728 D6R8Y8 96 aa8.82□□□□□ -1
PAF1-202ENST00000416728 F8W036 122 aa8.82□□□□□ -1
PAF1-202ENST00000416728 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
PAF1-202ENST00000416728 MRPL54Q6P161 138 aaKnown RBP8.82□□□□□ -1
PAF1-202ENST00000416728 FAM104AQ969W3 186 aa8.82□□□□□ -1
PAF1-202ENST00000416728 C9JQL5 133 aa8.81□□□□□ -1
PAF1-202ENST00000416728 A0A087WZ39 114 aa8.8□□□□□ -1
PAF1-202ENST00000416728 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
PAF1-202ENST00000416728 NPYP01303 97 aa8.8□□□□□ -1
PAF1-202ENST00000416728 PPBPP02775 128 aa8.8□□□□□ -1
PAF1-202ENST00000416728 IGLV7-43P04211 117 aa8.8□□□□□ -1
PAF1-202ENST00000416728 C10orf25Q5T742 122 aa8.8□□□□□ -1
PAF1-202ENST00000416728 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
PAF1-202ENST00000416728 DIRC1Q969H9 104 aa8.8□□□□□ -1
PAF1-202ENST00000416728 TGIF2-C20orf24A0A0A6YYL0 155 aa8.79□□□□□ -1
PAF1-202ENST00000416728 FAM168BA1KXE4 195 aa8.79□□□□□ -1
PAF1-202ENST00000416728 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
PAF1-202ENST00000416728 PEA15Q15121 130 aa8.79□□□□□ -1
PAF1-202ENST00000416728 C6orf48Q9UBA6 75 aa8.79□□□□□ -1
PAF1-202ENST00000416728 A0A1B0GXF2 115 aa8.78□□□□□ -1
PAF1-202ENST00000416728 RAB5AP20339 215 aa8.78□□□□□ -1
PAF1-202ENST00000416728 IFI27P40305 119 aaPredicted RBP8.78□□□□□ -1
PAF1-202ENST00000416728 SRSF3P84103 164 aaKnown RBP8.78□□□□□ -1
PAF1-202ENST00000416728 GAGE2EQ4V326 116 aa8.78□□□□□ -1
PAF1-202ENST00000416728 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
PAF1-202ENST00000416728 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
PAF1-202ENST00000416728 ORMDL3Q8N138 153 aa8.77□□□□□ -1.01
PAF1-202ENST00000416728 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
PAF1-202ENST00000416728 C12orf57Q99622 126 aa8.77□□□□□ -1.01
PAF1-202ENST00000416728 SMDT1Q9H4I9 107 aa8.77□□□□□ -1.01
PAF1-202ENST00000416728 H0Y9J4 135 aa8.76□□□□□ -1.01
PAF1-202ENST00000416728 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
PAF1-202ENST00000416728 KIAA0087Q14695 138 aa8.75□□□□□ -1.01
PAF1-202ENST00000416728 PRELID3AQ96N28 172 aa8.75□□□□□ -1.01
PAF1-202ENST00000416728 PYGO1Q9Y3Y4 419 aa8.75□□□□□ -1.01
PAF1-202ENST00000416728 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 M0QXV9 152 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 SMIM6P0DI80 62 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 UBE2BP63146 152 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 TMEM136Q6ZRR5 245 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 TMEM141Q96I45 108 aa8.74□□□□□ -1.01
PAF1-202ENST00000416728 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
PAF1-202ENST00000416728 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
PAF1-202ENST00000416728 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
PAF1-202ENST00000416728 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
PAF1-202ENST00000416728 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
PAF1-202ENST00000416728 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
PAF1-202ENST00000416728 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
PAF1-202ENST00000416728 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
PAF1-202ENST00000416728 LOC389332A0A1B0GUA5 103 aa8.71□□□□□ -1.02
PAF1-202ENST00000416728 UBE2D1P51668 147 aa8.71□□□□□ -1.02
PAF1-202ENST00000416728 Q6ZN92 141 aa8.71□□□□□ -1.02
PAF1-202ENST00000416728 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
PAF1-202ENST00000416728 MAP1LC3AQ9H492 121 aa8.71□□□□□ -1.02
PAF1-202ENST00000416728 LAMTOR2Q9Y2Q5 125 aa8.71□□□□□ -1.02
PAF1-202ENST00000416728 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
PAF1-202ENST00000416728 C9orf129Q5T035 196 aaKnown RBP8.7□□□□□ -1.02
PAF1-202ENST00000416728 CYSLTR1Q9Y271 337 aa8.7□□□□□ -1.02
PAF1-202ENST00000416728 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
PAF1-202ENST00000416728 PRSS2P07478 247 aa8.69□□□□□ -1.02
PAF1-202ENST00000416728 C2orf66Q6UXQ4 117 aa8.69□□□□□ -1.02
PAF1-202ENST00000416728 AKR1D1P51857 326 aa8.68□□□□□ -1.02
PAF1-202ENST00000416728 VCX2Q9H322 139 aa8.68□□□□□ -1.02
PAF1-202ENST00000416728 TOMM7Q9P0U1 55 aa8.68□□□□□ -1.02
PAF1-202ENST00000416728 S100PP25815 95 aa8.67□□□□□ -1.02
PAF1-202ENST00000416728 RPL13AP40429 203 aaKnown RBP8.67□□□□□ -1.02
PAF1-202ENST00000416728 CKS1BP61024 79 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms