RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 SLPIP03973 132 aa8.45□□□□□ -1.06
LINC01398-201ENST00000416581 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
LINC01398-201ENST00000416581 COX6A2Q02221 97 aa8.45□□□□□ -1.06
LINC01398-201ENST00000416581 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
LINC01398-201ENST00000416581 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
LINC01398-201ENST00000416581 FGF6P10767 208 aa8.44□□□□□ -1.06
LINC01398-201ENST00000416581 MAJINQ3KP22 176 aa8.44□□□□□ -1.06
LINC01398-201ENST00000416581 TRGC2P03986 189 aa8.43□□□□□ -1.06
LINC01398-201ENST00000416581 IFI27P40305 119 aaPredicted RBP8.43□□□□□ -1.06
LINC01398-201ENST00000416581 PRR3P79522 188 aaKnown RBP8.43□□□□□ -1.06
LINC01398-201ENST00000416581 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
LINC01398-201ENST00000416581 REG3GQ6UW15 175 aa8.43□□□□□ -1.06
LINC01398-201ENST00000416581 STPG4Q8N801 248 aa8.43□□□□□ -1.06
LINC01398-201ENST00000416581 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
LINC01398-201ENST00000416581 C18orf32Q8TCD1 76 aa8.43□□□□□ -1.06
LINC01398-201ENST00000416581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
LINC01398-201ENST00000416581 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
LINC01398-201ENST00000416581 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
LINC01398-201ENST00000416581 SS18Q15532 418 aa8.42□□□□□ -1.06
LINC01398-201ENST00000416581 ORMDL2Q53FV1 153 aa8.42□□□□□ -1.06
LINC01398-201ENST00000416581 TMEM18Q96B42 140 aa8.42□□□□□ -1.06
LINC01398-201ENST00000416581 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
LINC01398-201ENST00000416581 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
LINC01398-201ENST00000416581 CCL25O15444 150 aa8.41□□□□□ -1.06
LINC01398-201ENST00000416581 FOXI1Q12951 378 aa8.41□□□□□ -1.06
LINC01398-201ENST00000416581 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
LINC01398-201ENST00000416581 LINC01600Q96MT4 127 aa8.41□□□□□ -1.06
LINC01398-201ENST00000416581 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
LINC01398-201ENST00000416581 G0S2P27469 103 aa8.4□□□□□ -1.06
LINC01398-201ENST00000416581 SPINK6Q6UWN8 80 aa8.4□□□□□ -1.06
LINC01398-201ENST00000416581 FA2HQ7L5A8 372 aa8.4□□□□□ -1.06
LINC01398-201ENST00000416581 MRPL52Q86TS9 123 aaKnown RBP8.4□□□□□ -1.06
LINC01398-201ENST00000416581 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
LINC01398-201ENST00000416581 XCL1P47992 114 aa8.39□□□□□ -1.07
LINC01398-201ENST00000416581 RAB5BP61020 215 aa8.39□□□□□ -1.07
LINC01398-201ENST00000416581 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
LINC01398-201ENST00000416581 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
LINC01398-201ENST00000416581 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
LINC01398-201ENST00000416581 A0A096LNI7 61 aa8.38□□□□□ -1.07
LINC01398-201ENST00000416581 LINC00614P0C842 121 aa8.38□□□□□ -1.07
LINC01398-201ENST00000416581 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
LINC01398-201ENST00000416581 Q6ZRP5 223 aa8.38□□□□□ -1.07
LINC01398-201ENST00000416581 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
LINC01398-201ENST00000416581 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
LINC01398-201ENST00000416581 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
LINC01398-201ENST00000416581 SYCNQ0VAF6 134 aa8.37□□□□□ -1.07
LINC01398-201ENST00000416581 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
LINC01398-201ENST00000416581 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
LINC01398-201ENST00000416581 CYSLTR1Q9Y271 337 aa8.37□□□□□ -1.07
LINC01398-201ENST00000416581 LINC01549A6NIU2 74 aa8.36□□□□□ -1.07
LINC01398-201ENST00000416581 C1orf196B1AJZ1 125 aa8.36□□□□□ -1.07
LINC01398-201ENST00000416581 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
LINC01398-201ENST00000416581 CDC42SE2Q9NRR3 84 aa8.36□□□□□ -1.07
LINC01398-201ENST00000416581 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
LINC01398-201ENST00000416581 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
LINC01398-201ENST00000416581 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
LINC01398-201ENST00000416581 MALP21145 153 aa8.35□□□□□ -1.07
LINC01398-201ENST00000416581 BAGE3Q86Y29 109 aa8.35□□□□□ -1.07
LINC01398-201ENST00000416581 ZNF664Q8N3J9 261 aa8.35□□□□□ -1.07
LINC01398-201ENST00000416581 TOMM6Q96B49 74 aa8.35□□□□□ -1.07
LINC01398-201ENST00000416581 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 APOMO95445 188 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 NPSP0C0P6 89 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 MRPS36P82909 103 aaKnown RBP8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
LINC01398-201ENST00000416581 COX7A2LO14548 114 aa8.33□□□□□ -1.08
LINC01398-201ENST00000416581 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
LINC01398-201ENST00000416581 Q6ZUT4 128 aa8.33□□□□□ -1.08
LINC01398-201ENST00000416581 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 A0A096LNJ9 63 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 IGIPA6NJ69 53 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 HBDP02042 147 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 ERASQ7Z444 233 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 FAM104AQ969W3 186 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
LINC01398-201ENST00000416581 F8WDY8 70 aa8.31□□□□□ -1.08
LINC01398-201ENST00000416581 HSBP1O75506 76 aa8.31□□□□□ -1.08
LINC01398-201ENST00000416581 SERF1AO75920 110 aa8.31□□□□□ -1.08
LINC01398-201ENST00000416581 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
LINC01398-201ENST00000416581 SCGB3A1Q96QR1 104 aa8.31□□□□□ -1.08
LINC01398-201ENST00000416581 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
LINC01398-201ENST00000416581 LINC00310P59036 64 aa8.3□□□□□ -1.08
LINC01398-201ENST00000416581 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
LINC01398-201ENST00000416581 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
LINC01398-201ENST00000416581 Q6ZN92 141 aa8.3□□□□□ -1.08
LINC01398-201ENST00000416581 OPRPNQ99935 248 aaPredicted RBP8.3□□□□□ -1.08
LINC01398-201ENST00000416581 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
LINC01398-201ENST00000416581 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
LINC01398-201ENST00000416581 SRSF9Q13242 221 aaKnown RBP eCLIP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms