RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 ZNF664Q8N3J9 261 aa5.81□□□□□ -1.48
LINC01238-201ENST00000416204 LAMTOR2Q9Y2Q5 125 aa5.81□□□□□ -1.48
LINC01238-201ENST00000416204 IGLV4-60A0A075B6I1 120 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 A0A096LNI7 61 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 SNAI2O43623 268 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 NTF3P20783 257 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 DDTP30046 118 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 TWIST1Q15672 202 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 PMCHL1Q16048 86 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 SMIM15Q7Z3B0 74 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 OR10AG1Q8NH19 301 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 TPPP3Q9BW30 176 aa5.8□□□□□ -1.48
LINC01238-201ENST00000416204 TRBV25-1A0A075B6N4 114 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 C20orf202A1L168 122 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 GAGE12HA6NDE8 117 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 C3orf79P0CE67 100 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 KRTDAPP60985 99 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 CTAG1AP78358 180 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 MRPL51Q4U2R6 128 aaKnown RBP5.79□□□□□ -1.48
LINC01238-201ENST00000416204 FA2HQ7L5A8 372 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 URB1-AS1Q96HZ7 61 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 PRELID3AQ96N28 172 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 HSPB8Q9UJY1 196 aa5.79□□□□□ -1.48
LINC01238-201ENST00000416204 H7C1H1 209 aa5.78□□□□□ -1.48
LINC01238-201ENST00000416204 LEPROTL1O95214 131 aa5.78□□□□□ -1.48
LINC01238-201ENST00000416204 SRSF9Q13242 221 aaKnown RBP eCLIP5.78□□□□□ -1.48
LINC01238-201ENST00000416204 LBHQ53QV2 105 aaPredicted RBP5.78□□□□□ -1.48
LINC01238-201ENST00000416204 MRPL52Q86TS9 123 aaKnown RBP5.78□□□□□ -1.48
LINC01238-201ENST00000416204 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
LINC01238-201ENST00000416204 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
LINC01238-201ENST00000416204 VAMP8Q9BV40 100 aa5.78□□□□□ -1.48
LINC01238-201ENST00000416204 PRO1933Q9H354 126 aa5.78□□□□□ -1.48
LINC01238-201ENST00000416204 IGHV1-24A0A0C4DH33 117 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 LINC01546A6NGU7 62 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 D6R8Y8 96 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 CKS2P33552 79 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 MAP1LC3CQ9BXW4 147 aa5.77□□□□□ -1.49
LINC01238-201ENST00000416204 NXT2Q9NPJ8 142 aaKnown RBP5.77□□□□□ -1.49
LINC01238-201ENST00000416204 SPANXN1Q5VSR9 72 aa5.76□□□□□ -1.49
LINC01238-201ENST00000416204 MRAP2Q96G30 205 aa5.76□□□□□ -1.49
LINC01238-201ENST00000416204 MIEN1Q9BRT3 115 aa5.76□□□□□ -1.49
LINC01238-201ENST00000416204 MAP1LC3AQ9H492 121 aa5.76□□□□□ -1.49
LINC01238-201ENST00000416204 TRAV8-4A0A0B4J246 113 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 SYS1-DBNDD2H3BUS1 97 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 PPP1R17O96001 155 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 MGPP08493 103 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 IFI27P40305 119 aaPredicted RBP5.75□□□□□ -1.49
LINC01238-201ENST00000416204 TMEM97Q5BJF2 176 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 Q6ZRP5 223 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
LINC01238-201ENST00000416204 TNFRSF6BO95407 300 aa5.74□□□□□ -1.49
LINC01238-201ENST00000416204 NPYP01303 97 aa5.74□□□□□ -1.49
LINC01238-201ENST00000416204 HBDP02042 147 aa5.74□□□□□ -1.49
LINC01238-201ENST00000416204 PRR4Q16378 134 aa5.74□□□□□ -1.49
LINC01238-201ENST00000416204 TMEM243Q9BU79 118 aa5.74□□□□□ -1.49
LINC01238-201ENST00000416204 K7EMI3 77 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 SMIM17P0DL12 118 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 SPATA45Q537H7 98 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 CFAP161Q6P656 301 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 Q8N8P6 123 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 UQCR10Q9UDW1 63 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
LINC01238-201ENST00000416204 LOC389332A0A1B0GUA5 103 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 HSBP1L1C9JCN9 74 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 UBE2L6O14933 153 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 FCER1GP30273 86 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 LINC01545Q5VT33 79 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 CHCHD10Q8WYQ3 142 aaPredicted RBP5.72□□□□□ -1.49
LINC01238-201ENST00000416204 AP1S3Q96PC3 154 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 C20orf78Q9BR46 151 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
LINC01238-201ENST00000416204 TRAV26-2A0A0B4J265 109 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 A0A0U1RQV1 116 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 SMKR1H3BMG3 65 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 M0QY20 66 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 M0R143 59 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 IGLC3P0DOY3 106 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 RPL32P62910 135 aaKnown RBP5.71□□□□□ -1.5
LINC01238-201ENST00000416204 GAGE2BQ13066 116 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 NRACQ8N912 160 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 C2orf88Q9BSF0 95 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 ST20Q9HBF5 79 aa5.71□□□□□ -1.5
LINC01238-201ENST00000416204 A0A096LNJ9 63 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 GVQW2A0A096LPI5 108 aaPredicted RBP5.7□□□□□ -1.5
LINC01238-201ENST00000416204 A0A1B0GUV1 79 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 A6NJY4 79 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 ATP5LO75964 103 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 NCR2O95944 276 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 G0S2P27469 103 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms