RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 C1orf158Q8N1D5 194 aa7.77□□□□□ -1.17
COL12A1-203ENST00000416123 NAV2Q8IVL1 2488 aa7.77□□□□□ -1.17
COL12A1-203ENST00000416123 U3KQK5 164 aa7.77□□□□□ -1.17
COL12A1-203ENST00000416123 UBE2D1P51668 147 aa7.77□□□□□ -1.17
COL12A1-203ENST00000416123 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
COL12A1-203ENST00000416123 ATOX1O00244 68 aa7.77□□□□□ -1.17
COL12A1-203ENST00000416123 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
COL12A1-203ENST00000416123 LELP1Q5T871 98 aa7.76□□□□□ -1.17
COL12A1-203ENST00000416123 UBE2D4Q9Y2X8 147 aa7.76□□□□□ -1.17
COL12A1-203ENST00000416123 LINC00959A0A1B0GUT2 108 aa7.76□□□□□ -1.17
COL12A1-203ENST00000416123 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
COL12A1-203ENST00000416123 KLLNB2CW77 178 aa7.75□□□□□ -1.17
COL12A1-203ENST00000416123 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
COL12A1-203ENST00000416123 CRIP2P52943 208 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-203ENST00000416123 H3BT86 120 aa7.75□□□□□ -1.17
COL12A1-203ENST00000416123 TRIAP1O43715 76 aa7.75□□□□□ -1.17
COL12A1-203ENST00000416123 TRBV27A0A0K0K1C4 114 aa7.74□□□□□ -1.17
COL12A1-203ENST00000416123 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
COL12A1-203ENST00000416123 RNASE8Q8TDE3 154 aaKnown RBP7.74□□□□□ -1.17
COL12A1-203ENST00000416123 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-203ENST00000416123 FN1P02751 2386 aaKnown RBP7.74□□□□□ -1.17
COL12A1-203ENST00000416123 KIR2DL5BQ8NHK3 375 aa7.74□□□□□ -1.17
COL12A1-203ENST00000416123 C2CD3Q4AC94 2353 aa7.73□□□□□ -1.17
COL12A1-203ENST00000416123 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
COL12A1-203ENST00000416123 G3V4G9 280 aa7.73□□□□□ -1.17
COL12A1-203ENST00000416123 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
COL12A1-203ENST00000416123 TLN1Q9Y490 2541 aaKnown RBP7.72□□□□□ -1.17
COL12A1-203ENST00000416123 TLN2Q9Y4G6 2542 aa7.72□□□□□ -1.17
COL12A1-203ENST00000416123 IGLV4-69A0A075B6H9 119 aa7.72□□□□□ -1.17
COL12A1-203ENST00000416123 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.17
COL12A1-203ENST00000416123 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.18
COL12A1-203ENST00000416123 PIEZO1Q92508 2521 aa7.71□□□□□ -1.18
COL12A1-203ENST00000416123 MRGPRG-AS1Q2M3A8 158 aa7.71□□□□□ -1.18
COL12A1-203ENST00000416123 PLAC8L1A1L4L8 177 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 C10orf142B7Z368 130 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 CCKP06307 115 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 UBE2D3P61077 147 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 Q6ZTC4 211 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 SPTBN4Q9H254 2564 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 PDE6GP18545 87 aa7.7□□□□□ -1.18
COL12A1-203ENST00000416123 COX6A2Q02221 97 aa7.69□□□□□ -1.18
COL12A1-203ENST00000416123 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
COL12A1-203ENST00000416123 ANKRD17O75179 2603 aaKnown RBP7.69□□□□□ -1.18
COL12A1-203ENST00000416123 ANKRD11Q6UB99 2663 aaPredicted RBP7.69□□□□□ -1.18
COL12A1-203ENST00000416123 CDC42SE2Q9NRR3 84 aa7.68□□□□□ -1.18
COL12A1-203ENST00000416123 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
COL12A1-203ENST00000416123 COL4A2P08572 1712 aa7.68□□□□□ -1.18
COL12A1-203ENST00000416123 UBE2D2P62837 147 aa7.68□□□□□ -1.18
COL12A1-203ENST00000416123 M0R378 163 aa7.67□□□□□ -1.18
COL12A1-203ENST00000416123 MYO9AB2RTY4 2548 aa7.67□□□□□ -1.18
COL12A1-203ENST00000416123 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
COL12A1-203ENST00000416123 PRR3P79522 188 aaKnown RBP7.67□□□□□ -1.18
COL12A1-203ENST00000416123 YPEL4Q96NS1 127 aa7.67□□□□□ -1.18
COL12A1-203ENST00000416123 NUPR2A6NF83 97 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 POLR2KP53803 58 aaKnown RBP7.66□□□□□ -1.18
COL12A1-203ENST00000416123 Q6ZQY7 126 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 ABCA12Q86UK0 2595 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 MT-ATP8P03928 68 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 POM121L12Q8N7R1 296 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 MPLKIPQ8TAP9 179 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 LINC00643Q86TS7 51 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 USP17L23D6RBM5 183 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
COL12A1-203ENST00000416123 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 IGLV4-60A0A075B6I1 120 aa7.66□□□□□ -1.18
COL12A1-203ENST00000416123 LINC00694P0DN24 101 aa7.65□□□□□ -1.18
COL12A1-203ENST00000416123 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
COL12A1-203ENST00000416123 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.19
COL12A1-203ENST00000416123 SMIM20Q8N5G0 67 aa7.65□□□□□ -1.19
COL12A1-203ENST00000416123 CIRBP-AS1Q8TBR5 109 aa7.65□□□□□ -1.19
COL12A1-203ENST00000416123 TRBV30A0A0K0K1B3 111 aa7.65□□□□□ -1.19
COL12A1-203ENST00000416123 M0QXV9 152 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 C6orf223Q8N319 242 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 DOPEY1Q5JWR5 2465 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 SPTSSBQ8NFR3 76 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 MKI67P46013 3256 aaKnown RBP7.64□□□□□ -1.19
COL12A1-203ENST00000416123 Q6ZSN1 163 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 JMJD1CQ15652 2540 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 C16orf95Q9H693 158 aa7.64□□□□□ -1.19
COL12A1-203ENST00000416123 COX17Q14061 63 aa7.63□□□□□ -1.19
COL12A1-203ENST00000416123 FHL2Q14192 279 aa7.63□□□□□ -1.19
COL12A1-203ENST00000416123 MRPL55Q7Z7F7 128 aaKnown RBP7.63□□□□□ -1.19
COL12A1-203ENST00000416123 C2orf91Q6ZV80 131 aa7.63□□□□□ -1.19
COL12A1-203ENST00000416123 C20orf197Q8N268 126 aa7.63□□□□□ -1.19
COL12A1-203ENST00000416123 DHRS4-AS1Q9P1J3 65 aa7.63□□□□□ -1.19
COL12A1-203ENST00000416123 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
COL12A1-203ENST00000416123 Q8IZM0 81 aa7.62□□□□□ -1.19
COL12A1-203ENST00000416123 PRYO14603 147 aa7.62□□□□□ -1.19
COL12A1-203ENST00000416123 FAM30AQ9NZY2 134 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 SERP1Q9Y6X1 66 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
COL12A1-203ENST00000416123 IGIPA6NJ69 53 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 TIMM17BO60830 172 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 CHCHD7Q9BUK0 85 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 SNURFQ9Y675 71 aa7.61□□□□□ -1.19
COL12A1-203ENST00000416123 LINC00242Q5T6M2 205 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms