RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TRAV10A0A0B4J240 114 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 ANAPC13Q9BS18 74 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 TSPEAR-AS2P59090 65 aa10.22□□□□□ -0.77
SGCE-202ENST00000415788 RHOHQ15669 191 aa10.22□□□□□ -0.77
SGCE-202ENST00000415788 SUMO4Q6EEV6 95 aa10.22□□□□□ -0.77
SGCE-202ENST00000415788 MUC7Q8TAX7 377 aa10.22□□□□□ -0.77
SGCE-202ENST00000415788 RS1O15537 224 aa10.21□□□□□ -0.77
SGCE-202ENST00000415788 IGHV3-33P01772 117 aa10.21□□□□□ -0.77
SGCE-202ENST00000415788 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.78
SGCE-202ENST00000415788 NUPR2A6NF83 97 aa10.21□□□□□ -0.78
SGCE-202ENST00000415788 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.78
SGCE-202ENST00000415788 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.78
SGCE-202ENST00000415788 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
SGCE-202ENST00000415788 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
SGCE-202ENST00000415788 RHODO00212 210 aa10.2□□□□□ -0.78
SGCE-202ENST00000415788 GAGE5Q13069 117 aa10.2□□□□□ -0.78
SGCE-202ENST00000415788 GAGE6Q13070 117 aa10.2□□□□□ -0.78
SGCE-202ENST00000415788 ATXN8Q156A1 80 aa10.2□□□□□ -0.78
SGCE-202ENST00000415788 A4D1N5 150 aa10.19□□□□□ -0.78
SGCE-202ENST00000415788 C9JAW5 83 aa10.19□□□□□ -0.78
SGCE-202ENST00000415788 F5H768 121 aa10.19□□□□□ -0.78
SGCE-202ENST00000415788 HTN3P15516 51 aa10.19□□□□□ -0.78
SGCE-202ENST00000415788 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
SGCE-202ENST00000415788 Q6Q795 121 aa10.19□□□□□ -0.78
SGCE-202ENST00000415788 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
SGCE-202ENST00000415788 COL7A1Q02388 2944 aa10.18□□□□□ -0.78
SGCE-202ENST00000415788 MUC4Q99102 2169 aa10.18□□□□□ -0.78
SGCE-202ENST00000415788 IGHV3-53P01767 116 aa10.18□□□□□ -0.78
SGCE-202ENST00000415788 RPL13AP40429 203 aaKnown RBP10.18□□□□□ -0.78
SGCE-202ENST00000415788 SPANXA1Q9NS26 97 aa10.18□□□□□ -0.78
SGCE-202ENST00000415788 TRGV4A0A0C4DH28 118 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 F5H697 171 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 SNCGO76070 127 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 JPT2Q9H910 190 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 KLK5Q9Y337 293 aaPredicted RBP10.17□□□□□ -0.78
SGCE-202ENST00000415788 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 FHL2Q14192 279 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
SGCE-202ENST00000415788 A0A087WWL8 130 aa10.16□□□□□ -0.78
SGCE-202ENST00000415788 LINC01620Q4KN68 170 aa10.16□□□□□ -0.78
SGCE-202ENST00000415788 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
SGCE-202ENST00000415788 TRBV10-2A0A0K0K1G8 114 aa10.15□□□□□ -0.78
SGCE-202ENST00000415788 H3BNG1 76 aa10.15□□□□□ -0.78
SGCE-202ENST00000415788 MUSTN1Q8IVN3 82 aa10.15□□□□□ -0.78
SGCE-202ENST00000415788 ZNF22P17026 224 aaPredicted RBP10.15□□□□□ -0.79
SGCE-202ENST00000415788 MRPL23Q16540 153 aaKnown RBP10.15□□□□□ -0.79
SGCE-202ENST00000415788 IGHV3-73A0A0B4J1V6 119 aa10.14□□□□□ -0.79
SGCE-202ENST00000415788 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
SGCE-202ENST00000415788 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
SGCE-202ENST00000415788 Q1RN00 199 aa10.14□□□□□ -0.79
SGCE-202ENST00000415788 NTN5Q8WTR8 489 aaPredicted RBP10.14□□□□□ -0.79
SGCE-202ENST00000415788 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
SGCE-202ENST00000415788 M0QY20 66 aa10.13□□□□□ -0.79
SGCE-202ENST00000415788 PAX4O43316 350 aa10.13□□□□□ -0.79
SGCE-202ENST00000415788 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
SGCE-202ENST00000415788 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
SGCE-202ENST00000415788 ZNF56Q15929 161 aa10.13□□□□□ -0.79
SGCE-202ENST00000415788 C15orf53Q8NAA6 179 aa10.13□□□□□ -0.79
SGCE-202ENST00000415788 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
SGCE-202ENST00000415788 I3L3M4 83 aa10.12□□□□□ -0.79
SGCE-202ENST00000415788 TTC32Q5I0X7 151 aa10.12□□□□□ -0.79
SGCE-202ENST00000415788 CASC10Q5T4H9 136 aa10.12□□□□□ -0.79
SGCE-202ENST00000415788 H3BT86 120 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 IFITM1P13164 125 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 UBE2WQ96B02 151 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 SPANXDQ9BXN6 97 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 PYGO1Q9Y3Y4 419 aa10.11□□□□□ -0.79
SGCE-202ENST00000415788 K7EQD1 137 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 COX6CP09669 75 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 TGP01266 2768 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 TRBV10-1A0A0K0K1A3 114 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 GAGE12JA6NER3 117 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 GAGE4Q13068 117 aa10.1□□□□□ -0.79
SGCE-202ENST00000415788 H7C2G1 150 aa10.09□□□□□ -0.79
SGCE-202ENST00000415788 Q6ZSN1 163 aa10.09□□□□□ -0.79
SGCE-202ENST00000415788 ICOSQ9Y6W8 199 aa10.09□□□□□ -0.79
SGCE-202ENST00000415788 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 FAM240AA0A1B0GVK7 77 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 TRIAP1O43715 76 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 TIMM21Q9BVV7 248 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 GYPEP15421 78 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
SGCE-202ENST00000415788 C2orf82Q6UX34 121 aa10.08□□□□□ -0.8
SGCE-202ENST00000415788 OPRPNQ99935 248 aaPredicted RBP10.08□□□□□ -0.8
SGCE-202ENST00000415788 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
SGCE-202ENST00000415788 B5MCH6 92 aa10.07□□□□□ -0.8
SGCE-202ENST00000415788 LITAFQ99732 161 aa10.07□□□□□ -0.8
SGCE-202ENST00000415788 APLNQ9ULZ1 77 aa10.07□□□□□ -0.8
SGCE-202ENST00000415788 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
SGCE-202ENST00000415788 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms