RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 SMDT1Q9H4I9 107 aa9.19□□□□□ -0.94
DDX56-202ENST00000415758 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
DDX56-202ENST00000415758 RIGQ13278 110 aa9.18□□□□□ -0.94
DDX56-202ENST00000415758 LINC01551Q86U37 167 aa9.18□□□□□ -0.94
DDX56-202ENST00000415758 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
DDX56-202ENST00000415758 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
DDX56-202ENST00000415758 RPL32P62910 135 aaKnown RBP9.17□□□□□ -0.94
DDX56-202ENST00000415758 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
DDX56-202ENST00000415758 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
DDX56-202ENST00000415758 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
DDX56-202ENST00000415758 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
DDX56-202ENST00000415758 M0QXV9 152 aa9.16□□□□□ -0.94
DDX56-202ENST00000415758 TCAPO15273 167 aa9.16□□□□□ -0.94
DDX56-202ENST00000415758 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
DDX56-202ENST00000415758 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
DDX56-202ENST00000415758 LINC00862A6NCI5 91 aa9.15□□□□□ -0.94
DDX56-202ENST00000415758 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
DDX56-202ENST00000415758 UBE2BP63146 152 aa9.15□□□□□ -0.94
DDX56-202ENST00000415758 FAM104BQ5XKR9 115 aa9.15□□□□□ -0.94
DDX56-202ENST00000415758 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.94
DDX56-202ENST00000415758 BLOC1S1P78537 153 aa9.14□□□□□ -0.95
DDX56-202ENST00000415758 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
DDX56-202ENST00000415758 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
DDX56-202ENST00000415758 V9GYV3 84 aa9.14□□□□□ -0.95
DDX56-202ENST00000415758 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
DDX56-202ENST00000415758 ZNF861PO60384 105 aa9.13□□□□□ -0.95
DDX56-202ENST00000415758 CEBPGP53567 150 aa9.13□□□□□ -0.95
DDX56-202ENST00000415758 TCTE3Q8IZS6 198 aa9.13□□□□□ -0.95
DDX56-202ENST00000415758 NDUFC2-KCTD14E9PQ53 114 aa9.12□□□□□ -0.95
DDX56-202ENST00000415758 HBBP68871 147 aa9.12□□□□□ -0.95
DDX56-202ENST00000415758 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
DDX56-202ENST00000415758 NAT8BQ9UHF3 227 aa9.12□□□□□ -0.95
DDX56-202ENST00000415758 FAT4Q6V0I7 4981 aa9.12□□□□□ -0.95
DDX56-202ENST00000415758 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
DDX56-202ENST00000415758 ZNF727A8MUV8 499 aa9.11□□□□□ -0.95
DDX56-202ENST00000415758 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
DDX56-202ENST00000415758 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
DDX56-202ENST00000415758 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
DDX56-202ENST00000415758 TSPAN13O95857 204 aa9.09□□□□□ -0.95
DDX56-202ENST00000415758 CKS2P33552 79 aa9.09□□□□□ -0.95
DDX56-202ENST00000415758 A0A1B0GW15 77 aa9.08□□□□□ -0.96
DDX56-202ENST00000415758 NUPR1O60356 82 aa9.08□□□□□ -0.96
DDX56-202ENST00000415758 FAM74A3Q4VXF1 159 aa9.08□□□□□ -0.96
DDX56-202ENST00000415758 LINC00242Q5T6M2 205 aa9.08□□□□□ -0.96
DDX56-202ENST00000415758 C2orf82Q6UX34 121 aa9.08□□□□□ -0.96
DDX56-202ENST00000415758 EIF5A2Q9GZV4 153 aaKnown RBP9.08□□□□□ -0.96
DDX56-202ENST00000415758 PYGO1Q9Y3Y4 419 aa9.08□□□□□ -0.96
DDX56-202ENST00000415758 KRTAP9-6A0A140TA67 174 aa9.07□□□□□ -0.96
DDX56-202ENST00000415758 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
DDX56-202ENST00000415758 ALKAL2Q6UX46 152 aa9.07□□□□□ -0.96
DDX56-202ENST00000415758 LINC01561Q8N1V8 128 aa9.07□□□□□ -0.96
DDX56-202ENST00000415758 PACRGQ96M98 296 aaPredicted RBP9.07□□□□□ -0.96
DDX56-202ENST00000415758 A0A087X002 238 aa9.06□□□□□ -0.96
DDX56-202ENST00000415758 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
DDX56-202ENST00000415758 C22orf24Q9Y442 160 aa9.06□□□□□ -0.96
DDX56-202ENST00000415758 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
DDX56-202ENST00000415758 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
DDX56-202ENST00000415758 D6R8Y8 96 aa9.04□□□□□ -0.96
DDX56-202ENST00000415758 NPYP01303 97 aa9.04□□□□□ -0.96
DDX56-202ENST00000415758 LBHQ53QV2 105 aaPredicted RBP9.04□□□□□ -0.96
DDX56-202ENST00000415758 CTDSP1Q9GZU7 261 aa9.04□□□□□ -0.96
DDX56-202ENST00000415758 PPBPP02775 128 aa9.03□□□□□ -0.96
DDX56-202ENST00000415758 CRYGAP11844 174 aa9.03□□□□□ -0.96
DDX56-202ENST00000415758 RPL23P62829 140 aaKnown RBP9.03□□□□□ -0.96
DDX56-202ENST00000415758 TMEM141Q96I45 108 aa9.03□□□□□ -0.96
DDX56-202ENST00000415758 F8W036 122 aa9.02□□□□□ -0.97
DDX56-202ENST00000415758 RPL28P46779 137 aaKnown RBP9.02□□□□□ -0.97
DDX56-202ENST00000415758 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
DDX56-202ENST00000415758 TP73-AS1Q9UF72 201 aa9.02□□□□□ -0.97
DDX56-202ENST00000415758 S100A8P05109 93 aa9.01□□□□□ -0.97
DDX56-202ENST00000415758 RAB5AP20339 215 aa9.01□□□□□ -0.97
DDX56-202ENST00000415758 A0A1B0GXF2 115 aa9□□□□□ -0.97
DDX56-202ENST00000415758 BCE1O60756 84 aa9□□□□□ -0.97
DDX56-202ENST00000415758 Q6ZN92 141 aa9□□□□□ -0.97
DDX56-202ENST00000415758 TEX43Q6ZNM6 134 aa9□□□□□ -0.97
DDX56-202ENST00000415758 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
DDX56-202ENST00000415758 PRSS47A8MTI9 375 aa8.99□□□□□ -0.97
DDX56-202ENST00000415758 PRSS2P07478 247 aa8.99□□□□□ -0.97
DDX56-202ENST00000415758 CKS1BP61024 79 aa8.99□□□□□ -0.97
DDX56-202ENST00000415758 Q8IZM0 81 aa8.99□□□□□ -0.97
DDX56-202ENST00000415758 XAGE1AQ9HD64 81 aa8.99□□□□□ -0.97
DDX56-202ENST00000415758 ADIRFQ15847 76 aa8.98□□□□□ -0.97
DDX56-202ENST00000415758 C6orf226Q5I0X4 101 aa8.98□□□□□ -0.97
DDX56-202ENST00000415758 FAM19A3Q7Z5A8 133 aa8.98□□□□□ -0.97
DDX56-202ENST00000415758 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
DDX56-202ENST00000415758 ORMDL3Q8N138 153 aa8.98□□□□□ -0.97
DDX56-202ENST00000415758 AMELXQ99217 191 aa8.98□□□□□ -0.97
DDX56-202ENST00000415758 NAT8Q9UHE5 227 aa8.98□□□□□ -0.97
DDX56-202ENST00000415758 MRPL54Q6P161 138 aaKnown RBP8.97□□□□□ -0.97
DDX56-202ENST00000415758 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
DDX56-202ENST00000415758 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
DDX56-202ENST00000415758 C2orf88Q9BSF0 95 aa8.97□□□□□ -0.97
DDX56-202ENST00000415758 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
DDX56-202ENST00000415758 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
DDX56-202ENST00000415758 PRELID3AQ96N28 172 aa8.96□□□□□ -0.98
DDX56-202ENST00000415758 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
DDX56-202ENST00000415758 MUC17Q685J3 4493 aa8.95□□□□□ -0.98
DDX56-202ENST00000415758 NPSP0C0P6 89 aa8.95□□□□□ -0.98
DDX56-202ENST00000415758 CTAG1AP78358 180 aa8.95□□□□□ -0.98
DDX56-202ENST00000415758 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms