RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FAM19A5Q7Z5A7 132 aaPredicted RBP7.25□□□□□ -1.25
LIMS2-210ENST00000413578 OSTCQ9NRP0 149 aa7.25□□□□□ -1.25
LIMS2-210ENST00000413578 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
LIMS2-210ENST00000413578 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
LIMS2-210ENST00000413578 KIAA0087Q14695 138 aa7.24□□□□□ -1.25
LIMS2-210ENST00000413578 TMEM18Q96B42 140 aa7.24□□□□□ -1.25
LIMS2-210ENST00000413578 CARHSP1Q9Y2V2 147 aaKnown RBP7.24□□□□□ -1.25
LIMS2-210ENST00000413578 V9GYV3 84 aa7.24□□□□□ -1.25
LIMS2-210ENST00000413578 TRBV24-1A0A075B6N3 115 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 A0A0U1RQV1 116 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 M0QXV9 152 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 RPL39P62891 51 aaKnown RBP7.23□□□□□ -1.25
LIMS2-210ENST00000413578 MRPS36P82909 103 aaKnown RBP7.23□□□□□ -1.25
LIMS2-210ENST00000413578 RIGQ13278 110 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 GAGE2EQ4V326 116 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 TCTE3Q8IZS6 198 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 C20orf78Q9BR46 151 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 GAGE2DQ9UEU5 116 aa7.23□□□□□ -1.25
LIMS2-210ENST00000413578 UBE2D1P51668 147 aa7.22□□□□□ -1.25
LIMS2-210ENST00000413578 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
LIMS2-210ENST00000413578 SMIM7Q9BQ49 75 aa7.22□□□□□ -1.25
LIMS2-210ENST00000413578 SPANXA1Q9NS26 97 aa7.22□□□□□ -1.25
LIMS2-210ENST00000413578 LINC00862A6NCI5 91 aa7.21□□□□□ -1.26
LIMS2-210ENST00000413578 CEBPGP53567 150 aa7.21□□□□□ -1.26
LIMS2-210ENST00000413578 C9orf129Q5T035 196 aaKnown RBP7.21□□□□□ -1.26
LIMS2-210ENST00000413578 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
LIMS2-210ENST00000413578 TCAPO15273 167 aa7.2□□□□□ -1.26
LIMS2-210ENST00000413578 ZNF861PO60384 105 aa7.2□□□□□ -1.26
LIMS2-210ENST00000413578 UBE2BP63146 152 aa7.2□□□□□ -1.26
LIMS2-210ENST00000413578 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
LIMS2-210ENST00000413578 NDUFC2-KCTD14E9PQ53 114 aa7.19□□□□□ -1.26
LIMS2-210ENST00000413578 HBBP68871 147 aa7.19□□□□□ -1.26
LIMS2-210ENST00000413578 SMIM2Q9BVW6 85 aa7.19□□□□□ -1.26
LIMS2-210ENST00000413578 NAT8BQ9UHF3 227 aa7.19□□□□□ -1.26
LIMS2-210ENST00000413578 IFITM10A6NMD0 228 aa7.18□□□□□ -1.26
LIMS2-210ENST00000413578 TNFRSF6BO95407 300 aa7.18□□□□□ -1.26
LIMS2-210ENST00000413578 ALKAL2Q6UX46 152 aa7.18□□□□□ -1.26
LIMS2-210ENST00000413578 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
LIMS2-210ENST00000413578 ZNF727A8MUV8 499 aa7.17□□□□□ -1.26
LIMS2-210ENST00000413578 SRP19P09132 144 aaKnown RBP7.17□□□□□ -1.26
LIMS2-210ENST00000413578 FAM74A3Q4VXF1 159 aa7.17□□□□□ -1.26
LIMS2-210ENST00000413578 LINC00242Q5T6M2 205 aa7.17□□□□□ -1.26
LIMS2-210ENST00000413578 C2orf82Q6UX34 121 aa7.17□□□□□ -1.26
LIMS2-210ENST00000413578 TGIF2-C20orf24A0A0A6YYL0 155 aa7.16□□□□□ -1.26
LIMS2-210ENST00000413578 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
LIMS2-210ENST00000413578 CKS2P33552 79 aa7.16□□□□□ -1.26
LIMS2-210ENST00000413578 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
LIMS2-210ENST00000413578 A0A087X002 238 aa7.15□□□□□ -1.26
LIMS2-210ENST00000413578 A0A1B0GW15 77 aa7.15□□□□□ -1.26
LIMS2-210ENST00000413578 D6R8Y8 96 aa7.15□□□□□ -1.26
LIMS2-210ENST00000413578 NPYP01303 97 aa7.15□□□□□ -1.26
LIMS2-210ENST00000413578 LINC01561Q8N1V8 128 aa7.15□□□□□ -1.26
LIMS2-210ENST00000413578 EIF5A2Q9GZV4 153 aaKnown RBP7.15□□□□□ -1.26
LIMS2-210ENST00000413578 IGLV4-3A0A075B6K6 122 aa7.14□□□□□ -1.27
LIMS2-210ENST00000413578 NUPR1O60356 82 aa7.14□□□□□ -1.27
LIMS2-210ENST00000413578 TSPAN13O95857 204 aa7.14□□□□□ -1.27
LIMS2-210ENST00000413578 RPL23P62829 140 aaKnown RBP7.14□□□□□ -1.27
LIMS2-210ENST00000413578 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
LIMS2-210ENST00000413578 hCG_2014768A0A024R1R8 64 aa7.13□□□□□ -1.27
LIMS2-210ENST00000413578 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
LIMS2-210ENST00000413578 IFI27P40305 119 aaPredicted RBP7.13□□□□□ -1.27
LIMS2-210ENST00000413578 PACRGQ96M98 296 aaPredicted RBP7.13□□□□□ -1.27
LIMS2-210ENST00000413578 CTDSP1Q9GZU7 261 aa7.13□□□□□ -1.27
LIMS2-210ENST00000413578 TMEM141Q96I45 108 aa7.12□□□□□ -1.27
LIMS2-210ENST00000413578 PPBPP02775 128 aa7.11□□□□□ -1.27
LIMS2-210ENST00000413578 LINC00173Q6ZV60 143 aa7.11□□□□□ -1.27
LIMS2-210ENST00000413578 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
LIMS2-210ENST00000413578 LBHQ53QV2 105 aaPredicted RBP7.1□□□□□ -1.27
LIMS2-210ENST00000413578 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
LIMS2-210ENST00000413578 LINC00469Q8N7U9 141 aa7.1□□□□□ -1.27
LIMS2-210ENST00000413578 AMELXQ99217 191 aa7.1□□□□□ -1.27
LIMS2-210ENST00000413578 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
LIMS2-210ENST00000413578 TP73-AS1Q9UF72 201 aa7.1□□□□□ -1.27
LIMS2-210ENST00000413578 PRSS47A8MTI9 375 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 C9JQL5 133 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 F8W036 122 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 BCE1O60756 84 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 CRYGAP11844 174 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 RPL28P46779 137 aaKnown RBP7.09□□□□□ -1.27
LIMS2-210ENST00000413578 ADIRFQ15847 76 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 MRPL54Q6P161 138 aaKnown RBP7.09□□□□□ -1.27
LIMS2-210ENST00000413578 TEX43Q6ZNM6 134 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 Q8IZM0 81 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
LIMS2-210ENST00000413578 S100A8P05109 93 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 RAB5AP20339 215 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 ZC2HC1BQ5TFG8 222 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 Q6ZN92 141 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
LIMS2-210ENST00000413578 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 ORMDL3Q8N138 153 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 NAT8Q9UHE5 227 aa7.08□□□□□ -1.28
LIMS2-210ENST00000413578 A0A1B0GVG6 124 aa7.07□□□□□ -1.28
LIMS2-210ENST00000413578 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
LIMS2-210ENST00000413578 TMEM136Q6ZRR5 245 aa7.07□□□□□ -1.28
LIMS2-210ENST00000413578 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
LIMS2-210ENST00000413578 ANAPC11Q9NYG5 84 aa7.07□□□□□ -1.28
LIMS2-210ENST00000413578 PRSS2P07478 247 aa7.06□□□□□ -1.28
LIMS2-210ENST00000413578 CKS1BP61024 79 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms