RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 EMP1P54849 157 aa4.85□□□□□ -1.63
CPSF7-203ENST00000413184 CMC4P56277 68 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-203ENST00000413184 OPRPNQ99935 248 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-203ENST00000413184 PRADC1Q9BSG0 188 aa4.85□□□□□ -1.63
CPSF7-203ENST00000413184 CST9LQ9H4G1 147 aa4.85□□□□□ -1.63
CPSF7-203ENST00000413184 Q9UF83 564 aa4.85□□□□□ -1.63
CPSF7-203ENST00000413184 USH2AO75445 5202 aa4.85□□□□□ -1.63
CPSF7-203ENST00000413184 H3BRM9 83 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 K7EP13 123 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 CCL25O15444 150 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-203ENST00000413184 FXYD2P54710 66 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 UBE2V1Q13404 147 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 PAPPA-AS1Q5QFB9 102 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 TNFRSF18Q9Y5U5 241 aa4.84□□□□□ -1.63
CPSF7-203ENST00000413184 IGLV4-3A0A075B6K6 122 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 TRBV7-3A0A075B6L6 115 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 A6NDN8 102 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 PTTG1IPP53801 180 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 VAMP3Q15836 100 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 TAL2Q16559 108 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 Q6ZRU5 148 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 NFE4Q86UQ8 179 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 CEND1Q8N111 149 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 RNASE8Q8TDE3 154 aaKnown RBP4.83□□□□□ -1.64
CPSF7-203ENST00000413184 FAM104AQ969W3 186 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 PLEKHB2Q96CS7 222 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 DNAJC30Q96LL9 226 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
CPSF7-203ENST00000413184 TRGV1A0A0A0MS02 117 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 ZNF815PA8K554 130 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 TSPEAR-AS2P59090 65 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 RPL37AP61513 92 aaKnown RBP4.82□□□□□ -1.64
CPSF7-203ENST00000413184 HERVK_113P61574 105 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 AMMECR1LQ6DCA0 310 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 Q6ZTI0 123 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 OR4C5Q8NGB2 326 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 TMEM263Q8WUH6 116 aaKnown RBP4.82□□□□□ -1.64
CPSF7-203ENST00000413184 RAB37Q96AX2 223 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 NAA38Q9BRA0 125 aaKnown RBP4.82□□□□□ -1.64
CPSF7-203ENST00000413184 TM2D2Q9BX73 214 aa4.82□□□□□ -1.64
CPSF7-203ENST00000413184 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-203ENST00000413184 TRAV4A0A0B4J268 109 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 A0A0J9YXV3 536 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 PLAC8L1A1L4L8 177 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-203ENST00000413184 H3BUT2 72 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 SMIM13P0DJ93 91 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 ZNF22P17026 224 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-203ENST00000413184 TMEM170BQ5T4T1 132 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 SCXQ7RTU7 201 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 AMELXQ99217 191 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
CPSF7-203ENST00000413184 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-203ENST00000413184 TMEM223A0PJW6 202 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 K7EQD1 137 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 K7ERJ3 54 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 LEPROTO15243 131 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 DAZ2Q13117 558 aaKnown RBP4.8□□□□□ -1.64
CPSF7-203ENST00000413184 COTL1Q14019 142 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 RNASE13Q5GAN3 156 aaKnown RBP4.8□□□□□ -1.64
CPSF7-203ENST00000413184 Q6ZUT4 128 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 C16orf74Q96GX8 76 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 VCX2Q9H322 139 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 NOP10Q9NPE3 64 aaKnown RBP4.8□□□□□ -1.64
CPSF7-203ENST00000413184 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 NHP2Q9NX24 153 aaKnown RBP4.8□□□□□ -1.64
CPSF7-203ENST00000413184 UBE2D4Q9Y2X8 147 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 X6R8D5 127 aa4.8□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE12BA1L429 117 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE7O76087 117 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE12FP0CL80 117 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE12GP0CL81 117 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE12IP0CL82 117 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 CRYBA4P53673 196 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 Q6ZSA8 131 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 OR5A1Q8NGJ0 315 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-203ENST00000413184 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
CPSF7-203ENST00000413184 IGHV3-64A0A075B6Q5 118 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 A0A0J9YY99 117 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 TRBV10-1A0A0K0K1A3 114 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 A0A1B0GWB2 263 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 A0A1W2PPM0 123 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 J3QQQ9 107 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 K7EP34 96 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 LGALS3P17931 250 aaKnown RBP4.78□□□□□ -1.64
CPSF7-203ENST00000413184 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-203ENST00000413184 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms