RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 COX8AP10176 69 aa6.53□□□□□ -1.36
SOX9-AS1-201ENST00000412640 DAD1P61803 113 aa6.53□□□□□ -1.36
SOX9-AS1-201ENST00000412640 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
SOX9-AS1-201ENST00000412640 STPG4Q8N801 248 aa6.53□□□□□ -1.36
SOX9-AS1-201ENST00000412640 C14orf144Q96I85 54 aa6.53□□□□□ -1.36
SOX9-AS1-201ENST00000412640 LOC100131303A0A0U1RQF7 123 aa6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 DLEU1O43261 78 aa6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 ATP5G1P05496 136 aa6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 SMAGPQ0VAQ4 97 aa6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 SLC25A34Q6PIV7 304 aa6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 VCX2Q9H322 139 aa6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 MRPS16Q9Y3D3 137 aaKnown RBP6.52□□□□□ -1.37
SOX9-AS1-201ENST00000412640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 IGKV2-29A2NJV5 120 aaPredicted RBP6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 FGF6P10767 208 aa6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 HAMPP81172 84 aa6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 BOD1L2Q8IYS8 172 aa6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 OPRPNQ99935 248 aaPredicted RBP6.51□□□□□ -1.37
SOX9-AS1-201ENST00000412640 TRBV25-1A0A075B6N4 114 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 TRAV26-1A0A087WT03 109 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 TRBV6-8A0A0A6YYG3 113 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 SIVA1O15304 175 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 PAX4O43316 350 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 GYPEP15421 78 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 FAM19A3Q7Z5A8 133 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 VSIG2Q96IQ7 327 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
SOX9-AS1-201ENST00000412640 E9PLD3 99 aa6.49□□□□□ -1.37
SOX9-AS1-201ENST00000412640 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
SOX9-AS1-201ENST00000412640 HNRNPA3P51991 378 aaKnown RBP6.49□□□□□ -1.37
SOX9-AS1-201ENST00000412640 ATP6V0E2Q8NHE4 81 aa6.49□□□□□ -1.37
SOX9-AS1-201ENST00000412640 IGKV2D-26A0A0A0MRZ7 120 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 TINCRA0A1B0GVN0 87 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 H3BNG1 76 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 KRTAP10-1P60331 282 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 Q6ZUT4 128 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
SOX9-AS1-201ENST00000412640 HTN3P15516 51 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 UBE2D1P51668 147 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 TIRAPP58753 221 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 CTAG1AP78358 180 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 C2orf91Q6ZV80 131 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 C15orf53Q8NAA6 179 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 CHAC1Q9BUX1 264 aa6.47□□□□□ -1.37
SOX9-AS1-201ENST00000412640 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TMEM223A0PJW6 202 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 F5H768 121 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 M0R143 59 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 UBE2L6O14933 153 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 ZNF22P17026 224 aaPredicted RBP6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 NMUP48645 174 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 HERVK_113P61574 105 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 MRPL23Q16540 153 aaKnown RBP6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 DGAT2L7PQ6IED9 249 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 OR5A1Q8NGJ0 315 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 SNHG12Q9BXW3 62 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 HIGD1BQ9P298 99 aa6.46□□□□□ -1.38
SOX9-AS1-201ENST00000412640 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
SOX9-AS1-201ENST00000412640 SEC11AP67812 179 aa6.45□□□□□ -1.38
SOX9-AS1-201ENST00000412640 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
SOX9-AS1-201ENST00000412640 AMMECR1LQ6DCA0 310 aa6.45□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
SOX9-AS1-201ENST00000412640 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
SOX9-AS1-201ENST00000412640 A0A096LPF7 62 aa6.44□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TMEM170BQ5T4T1 132 aa6.44□□□□□ -1.38
SOX9-AS1-201ENST00000412640 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TP73-AS1Q9UF72 201 aa6.44□□□□□ -1.38
SOX9-AS1-201ENST00000412640 ICOSQ9Y6W8 199 aa6.44□□□□□ -1.38
SOX9-AS1-201ENST00000412640 A0A0J9YY99 117 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 LEPROTO15243 131 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 HERVK_113P63121 156 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 GAGE6Q13070 117 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 LINC00242Q5T6M2 205 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 CHCHD5Q9BSY4 110 aa6.43□□□□□ -1.38
SOX9-AS1-201ENST00000412640 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
SOX9-AS1-201ENST00000412640 LELP1Q5T871 98 aa6.42□□□□□ -1.38
SOX9-AS1-201ENST00000412640 PLEKHB2Q96CS7 222 aa6.42□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
SOX9-AS1-201ENST00000412640 IGHV1-58A0A0C4DH39 117 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 H3BRM9 83 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 J3QQQ9 107 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 CCL25O15444 150 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TSPEAR-AS2P59090 65 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 RBX1P62877 108 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 HSD52Q0P140 79 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 TAL2Q16559 108 aa6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 GEMIN7Q9H840 131 aaKnown RBP6.41□□□□□ -1.38
SOX9-AS1-201ENST00000412640 IGLV5-39A0A0G2JS06 123 aa6.4□□□□□ -1.38
SOX9-AS1-201ENST00000412640 COX6A2Q02221 97 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms