RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PLA2G2CQ5R387 149 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
PTPN13-202ENST00000411767 Q6ZTI0 123 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 AMELXQ99217 191 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 TRIOBPQ9H2D6 2365 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 Q96NJ1 140 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 ATG2BQ96BY7 2078 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 PIKFYVEQ9Y2I7 2098 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 KIF26BQ2KJY2 2108 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 PINLYPA6NC86 204 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 ODF3BA8MYP8 253 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 I3L2K1 104 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 PATJQ8NI35 1801 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 PLXNB2O15031 1838 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV2-8P01709 118 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 SPATA3Q8NHX4 192 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 MED12Q93074 2177 aa3.3□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV2-11P01706 119 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 TYMSOSQ8TAI1 123 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 FSTL3O95633 263 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 LINC00205P59089 165 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 MAPK1IP1LQ8NDC0 245 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV3-1P01715 115 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 KRTAP27-1Q3LI81 207 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 MED13Q9UHV7 2174 aa3.29□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV5-37A0A075B6J1 123 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 ZFP36P26651 326 aaKnown RBP3.28□□□□□ -1.88
PTPN13-202ENST00000411767 SPINK7P58062 85 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 IGFL3Q6UXB1 125 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 RBBP6Q7Z6E9 1792 aaKnown RBP3.28□□□□□ -1.88
PTPN13-202ENST00000411767 ADAMTSL1Q8N6G6 1762 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 ZNF236Q9UL36 1845 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 TRPM7Q96QT4 1865 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 BRCA1P38398 1863 aaKnown RBP3.28□□□□□ -1.88
PTPN13-202ENST00000411767 AKAP6Q13023 2319 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 M0QY20 66 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 WIPF1O43516 503 aa3.28□□□□□ -1.88
PTPN13-202ENST00000411767 A8MUN3 132 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 OBSCN-AS1Q96MR7 158 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 ZNF503-AS2A6NEH8 195 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 RP1L1Q8IWN7 2480 aaPredicted RBP3.27□□□□□ -1.89
PTPN13-202ENST00000411767 Q6ZR03 302 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
PTPN13-202ENST00000411767 DOCK3Q8IZD9 2030 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 RALGAPA2Q2PPJ7 1873 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 RTL8CO15255 209 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 ZNF575Q86XF7 245 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 LINC00476Q8WZB0 136 aa3.27□□□□□ -1.89
PTPN13-202ENST00000411767 PARP14Q460N5 1801 aa3.26□□□□□ -1.89
PTPN13-202ENST00000411767 CASP8AP2Q9UKL3 1982 aa3.26□□□□□ -1.89
PTPN13-202ENST00000411767 COL6A6A6NMZ7 2263 aa3.26□□□□□ -1.89
PTPN13-202ENST00000411767 BBC3Q96PG8 261 aaPredicted RBP3.26□□□□□ -1.89
PTPN13-202ENST00000411767 MUC4Q99102 2169 aa3.26□□□□□ -1.89
PTPN13-202ENST00000411767 A0A0D9SG42 100 aa3.26□□□□□ -1.89
PTPN13-202ENST00000411767 SDK2Q58EX2 2172 aa3.26□□□□□ -1.89
PTPN13-202ENST00000411767 A8MWP4 228 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 Q6ZRP5 223 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 DOCK4Q8N1I0 1966 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 FAM104AQ969W3 186 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 TSPEAR-AS2P59090 65 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 TSC2P49815 1807 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 POLR2KP53803 58 aaKnown RBP3.25□□□□□ -1.89
PTPN13-202ENST00000411767 DEFB114Q30KQ6 69 aa3.25□□□□□ -1.89
PTPN13-202ENST00000411767 LINC00167Q96N53 147 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 CDC42SE2Q9NRR3 84 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 LINC00336Q6ZUF6 198 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 LINC00846Q9NV44 126 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 TANC2Q9HCD6 1990 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 K7EQG2 157 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 RLFQ13129 1914 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 MAPKAPK5-AS1Q8N8E1 139 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
PTPN13-202ENST00000411767 KIF25-AS1Q9Y6Z4 181 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 FREM3P0C091 2139 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 PAPPA2Q9BXP8 1791 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 A0A0G2JMZ2 1700 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 LRRC37A2A6NM11 1700 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 PTPRFP10586 1907 aa3.23□□□□□ -1.89
PTPN13-202ENST00000411767 ARID2Q68CP9 1835 aa3.22□□□□□ -1.89
PTPN13-202ENST00000411767 FER1L5A0AVI2 2057 aa3.22□□□□□ -1.89
PTPN13-202ENST00000411767 TP53TG3Q9ULZ0 132 aa3.22□□□□□ -1.89
PTPN13-202ENST00000411767 IGLV1-44P01699 117 aa3.22□□□□□ -1.89
PTPN13-202ENST00000411767 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
PTPN13-202ENST00000411767 ZNF295-AS1Q8N0V1 137 aa3.22□□□□□ -1.89
PTPN13-202ENST00000411767 MYLKQ15746 1914 aa3.21□□□□□ -1.89
PTPN13-202ENST00000411767 C22orf24Q9Y442 160 aa3.21□□□□□ -1.9
PTPN13-202ENST00000411767 TNP2Q05952 138 aa3.21□□□□□ -1.9
PTPN13-202ENST00000411767 EP300Q09472 2414 aaPredicted RBP3.21□□□□□ -1.9
PTPN13-202ENST00000411767 PLXNB1O43157 2135 aa3.21□□□□□ -1.9
PTPN13-202ENST00000411767 SPTBN2O15020 2390 aa3.21□□□□□ -1.9
PTPN13-202ENST00000411767 SHANK1Q9Y566 2161 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms