RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 SPTBN5Q9NRC6 3674 aaKnown RBP-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 ANKRD50Q9ULJ7 1429 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 CHD7Q9P2D1 2997 aa-1.5□□□□□ -2.65
RNU4-55P-201ENST00000410731 SMG1Q96Q15 3661 aaKnown RBP-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 RIMS1Q86UR5 1692 aaKnown RBP-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 BTAF1O14981 1849 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 DOCK2Q92608 1830 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 MYO9AB2RTY4 2548 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 TRBV7-3A0A075B6L6 115 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 HCG22E2RYF7 251 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 M0R129 80 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 S100A5P33763 92 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 C10orf113Q5VZT2 155 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 CHMP6Q96FZ7 201 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 ATPIF1Q9UII2 106 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 LINC01558Q9Y6Z2 57 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 DISP2A7MBM2 1401 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 SYNJ1O43426 1573 aa-1.51□□□□□ -2.65
RNU4-55P-201ENST00000410731 MYH6P13533 1939 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 IGLC7A0M8Q6 106 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 SNCGO76070 127 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 NCS1P62166 190 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 TOMM20LQ6UXN7 152 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 TTC9CQ8N5M4 171 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 SPTSSAQ969W0 71 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 TMEM2Q9UHN6 1383 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 NKTRP30414 1462 aaKnown RBP-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 IFT140Q96RY7 1462 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 TLN2Q9Y4G6 2542 aa-1.52□□□□□ -2.65
RNU4-55P-201ENST00000410731 COL6A5A8TX70 2615 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 DNAH5Q8TE73 4624 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 TRAV13-2A0A0B4J235 113 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 H0YAA0 97 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 NDUFB6O95139 128 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 TNFSF15O95150 251 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 B2MP61769 119 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 SAMD13Q5VXD3 122 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 TRIQKQ629K1 86 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 TCTE3Q8IZS6 198 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 FDCSPQ8NFU4 85 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 LINC01600Q96MT4 127 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 CICQ96RK0 1608 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 CRIPTQ9P021 101 aa-1.53□□□□□ -2.65
RNU4-55P-201ENST00000410731 CDK5RAP2Q96SN8 1893 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 COL14A1Q05707 1796 aaKnown RBP-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 CCDC141Q6ZP82 1450 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 PPIP5K1Q6PFW1 1433 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 ROCK1Q13464 1354 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 I3L3M4 83 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 E2F6O75461 281 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 SFT2D2O95562 160 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 MGPP08493 103 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 SCTP09683 121 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 BTG2P78543 158 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 TMEM128Q5BJH2 165 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 Q6ZUT4 128 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 PSMG3Q9BT73 122 aaPredicted RBP-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 GID8Q9NWU2 228 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 HIGD1AQ9Y241 93 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 ARAP2Q8WZ64 1704 aa-1.54□□□□□ -2.66
RNU4-55P-201ENST00000410731 TRAV36DV7A0A075B6V5 113 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 CMPK1P30085 196 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 DEFB1P60022 68 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 RRAS2P62070 204 aaPredicted RBP-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 RPS28P62857 69 aaKnown RBP-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 UBA52P62987 128 aaKnown RBP-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 LELP1Q5T871 98 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 AKAP14Q86UN6 197 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 TAC4Q86UU9 113 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 DYNLRB1Q9NP97 96 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 A0A0G2JMZ2 1700 aa-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 MARF1Q9Y4F3 1742 aaKnown RBP-1.55□□□□□ -2.66
RNU4-55P-201ENST00000410731 ZNF518AQ6AHZ1 1483 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 SPENQ96T58 3664 aaKnown RBP-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 CFAP46Q8IYW2 2715 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 FAM236AA0A1B0GUQ0 79 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 FAM236BA0A1B0GV22 79 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 A0A1B0GX51 115 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 K7EP34 96 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 HMGN4O00479 90 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 HIST1H1AQ02539 215 aaPredicted RBP-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 HEPN1Q6WQI6 88 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 WFDC13Q8IUB5 93 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 SPRR4Q96PI1 79 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 PCBD2Q9H0N5 130 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 CDC42SE2Q9NRR3 84 aa-1.56□□□□□ -2.66
RNU4-55P-201ENST00000410731 LRBAP50851 2863 aa-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 TRAV30A0A087WSZ9 112 aa-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 TMEM238C9JI98 176 aa-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 TFAMQ00059 246 aaKnown RBP-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 MMGT1Q8N4V1 131 aa-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 FAM167A-AS1Q96KT0 104 aa-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 MGST2Q99735 147 aa-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 PRG4Q92954 1404 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-55P-201ENST00000410731 TRRAPQ9Y4A5 3859 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 ANKRD30AQ9BXX3 1397 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 EYSQ5T1H1 3165 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 PSME4Q14997 1843 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 LOC285095A0A1B0GVY8 99 aa-1.58□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms