RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ODF3BA8MYP8 253 aa6.19□□□□□ -1.42
SCN9A-203ENST00000409672 CTRLP40313 264 aa6.18□□□□□ -1.42
SCN9A-203ENST00000409672 SPANXCQ9NY87 97 aa6.18□□□□□ -1.42
SCN9A-203ENST00000409672 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
SCN9A-203ENST00000409672 LELP1Q5T871 98 aa6.18□□□□□ -1.42
SCN9A-203ENST00000409672 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
SCN9A-203ENST00000409672 CRIP2P52943 208 aaPredicted RBP6.18□□□□□ -1.42
SCN9A-203ENST00000409672 TP73-AS1Q9UF72 201 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 KRTAP27-1Q3LI81 207 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 TAX1BP3O14907 124 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 AVPP01185 164 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 COX6A2Q02221 97 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 Q8N9L7 120 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 Q6ZQY7 126 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 TIMM17BO60830 172 aa6.17□□□□□ -1.42
SCN9A-203ENST00000409672 SPANXB1Q9NS25 103 aaPredicted RBP6.17□□□□□ -1.42
SCN9A-203ENST00000409672 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
SCN9A-203ENST00000409672 LINC01545Q5VT33 79 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 PSMG3-AS1Q96PY0 264 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 PCNTO95613 3336 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 PCOTHQ58A44 107 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 C11orf71Q6IPW1 123 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 REG3GQ6UW15 175 aa6.16□□□□□ -1.42
SCN9A-203ENST00000409672 ZFYVE26Q68DK2 2539 aa6.15□□□□□ -1.42
SCN9A-203ENST00000409672 J3QL48 77 aa6.15□□□□□ -1.42
SCN9A-203ENST00000409672 IGLC6P0CF74 106 aa6.15□□□□□ -1.42
SCN9A-203ENST00000409672 SERTAD4-AS1Q5TG53 156 aa6.15□□□□□ -1.42
SCN9A-203ENST00000409672 CYSRT1A8MQ03 144 aa6.15□□□□□ -1.42
SCN9A-203ENST00000409672 SPACA4Q8TDM5 124 aa6.15□□□□□ -1.42
SCN9A-203ENST00000409672 M0R378 163 aa6.15□□□□□ -1.43
SCN9A-203ENST00000409672 ACACBO00763 2458 aa6.15□□□□□ -1.43
SCN9A-203ENST00000409672 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 CD164L2Q6UWJ8 174 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 LINC00308Q8TCZ7 52 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 MYO18BQ8IUG5 2567 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 CHTF8P0CG12 524 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 M0QY20 66 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 SPRY4Q9C004 299 aa6.14□□□□□ -1.43
SCN9A-203ENST00000409672 CRIP1P50238 77 aa6.13□□□□□ -1.43
SCN9A-203ENST00000409672 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
SCN9A-203ENST00000409672 IGKV2-30P06310 120 aa6.13□□□□□ -1.43
SCN9A-203ENST00000409672 H7C423 109 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 PRLHP81277 87 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 TRIAP1O43715 76 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 MRGPRG-AS1Q2M3A8 158 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 IBA57-AS1B1ANH7 110 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 DHRS4-AS1Q9P1J3 65 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 PRR9Q5T870 116 aa6.12□□□□□ -1.43
SCN9A-203ENST00000409672 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
SCN9A-203ENST00000409672 PDE6GP18545 87 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 MYO9AB2RTY4 2548 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 MAPKAPK5-AS1Q8N8E1 139 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 TRBV7-6A0A0J9YX20 115 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 LST1O00453 97 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 C2CD3Q4AC94 2353 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 TRBV27A0A0K0K1C4 114 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 A8MTW9 85 aa6.11□□□□□ -1.43
SCN9A-203ENST00000409672 COL27A1Q8IZC6 1860 aaPredicted RBP6.1□□□□□ -1.43
SCN9A-203ENST00000409672 MDFIQ99750 246 aa6.1□□□□□ -1.43
SCN9A-203ENST00000409672 Q9BRP9 147 aa6.1□□□□□ -1.43
SCN9A-203ENST00000409672 CACNA1AO00555 2505 aa6.1□□□□□ -1.43
SCN9A-203ENST00000409672 J3KT08 172 aa6.1□□□□□ -1.43
SCN9A-203ENST00000409672 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
SCN9A-203ENST00000409672 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
SCN9A-203ENST00000409672 ODF3Q96PU9 254 aa6.09□□□□□ -1.43
SCN9A-203ENST00000409672 TSHBP01222 138 aa6.09□□□□□ -1.43
SCN9A-203ENST00000409672 ZNF73O43830 326 aaPredicted RBP6.09□□□□□ -1.44
SCN9A-203ENST00000409672 FAM19A3Q7Z5A8 133 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 Q9UF83 564 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 IGLV4-60A0A075B6I1 120 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 RNASE3P12724 160 aaKnown RBP6.08□□□□□ -1.44
SCN9A-203ENST00000409672 C10orf91Q5T1B1 145 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 MBD6Q96DN6 1003 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 GAS8-AS1O95177 125 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 BEAN1Q3B7T3 259 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 C7orf65Q6ZTY9 151 aa6.08□□□□□ -1.44
SCN9A-203ENST00000409672 TTC28Q96AY4 2481 aa6.07□□□□□ -1.44
SCN9A-203ENST00000409672 H3BT86 120 aa6.07□□□□□ -1.44
SCN9A-203ENST00000409672 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
SCN9A-203ENST00000409672 DNAH12Q6ZR08 3092 aa6.07□□□□□ -1.44
SCN9A-203ENST00000409672 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
SCN9A-203ENST00000409672 RNASE8Q8TDE3 154 aaKnown RBP6.07□□□□□ -1.44
SCN9A-203ENST00000409672 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
SCN9A-203ENST00000409672 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
SCN9A-203ENST00000409672 ANKHD1Q8IWZ3 2542 aaKnown RBP6.06□□□□□ -1.44
SCN9A-203ENST00000409672 COA6Q5JTJ3 125 aaKnown RBP6.06□□□□□ -1.44
SCN9A-203ENST00000409672 RNF185Q96GF1 192 aa6.06□□□□□ -1.44
SCN9A-203ENST00000409672 MRPL55Q7Z7F7 128 aaKnown RBP6.06□□□□□ -1.44
SCN9A-203ENST00000409672 FN1P02751 2386 aaKnown RBP6.06□□□□□ -1.44
SCN9A-203ENST00000409672 NDUFC2-KCTD14E9PQ53 114 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms