RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
CHRNA1-204ENST00000409323 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
CHRNA1-204ENST00000409323 UBE2D1P51668 147 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 COX6A2Q02221 97 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 VAMP8Q9BV40 100 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 RYR2Q92736 4967 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 WFDC2Q14508 124 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 PMVKQ15126 192 aa9.37□□□□□ -0.91
CHRNA1-204ENST00000409323 TNP2Q05952 138 aa9.36□□□□□ -0.91
CHRNA1-204ENST00000409323 PAPPA-AS1Q5QFB9 102 aa9.36□□□□□ -0.91
CHRNA1-204ENST00000409323 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
CHRNA1-204ENST00000409323 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
CHRNA1-204ENST00000409323 RMI2Q96E14 147 aa9.36□□□□□ -0.91
CHRNA1-204ENST00000409323 PMCHL2Q9BQD1 86 aa9.36□□□□□ -0.91
CHRNA1-204ENST00000409323 DNAH10Q8IVF4 4471 aa9.35□□□□□ -0.91
CHRNA1-204ENST00000409323 TRAV8-4A0A0B4J246 113 aa9.35□□□□□ -0.91
CHRNA1-204ENST00000409323 FOXI1Q12951 378 aa9.35□□□□□ -0.91
CHRNA1-204ENST00000409323 C5orf38Q86SI9 138 aa9.35□□□□□ -0.91
CHRNA1-204ENST00000409323 TSTD3H0UI37 97 aa9.34□□□□□ -0.91
CHRNA1-204ENST00000409323 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
CHRNA1-204ENST00000409323 TM2D2Q9BX73 214 aa9.34□□□□□ -0.91
CHRNA1-204ENST00000409323 F8VRH5 84 aa9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 FUSP35637 526 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 MAJINQ3KP22 176 aa9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 SPATA45Q537H7 98 aa9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-204ENST00000409323 IGLV4-69A0A075B6H9 119 aa9.32□□□□□ -0.92
CHRNA1-204ENST00000409323 DPM2O94777 84 aa9.32□□□□□ -0.92
CHRNA1-204ENST00000409323 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
CHRNA1-204ENST00000409323 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-204ENST00000409323 IGKCP01834 107 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 PLNP26678 52 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 CHAC1Q9BUX1 264 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 PRO1933Q9H354 126 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 RYR3Q15413 4870 aa9.31□□□□□ -0.92
CHRNA1-204ENST00000409323 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 C11orf86A6NJI1 115 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 USP17L23D6RBM5 183 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 LINC00469Q8N7U9 141 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 COX11Q9Y6N1 276 aa9.3□□□□□ -0.92
CHRNA1-204ENST00000409323 PCP4L1A6NKN8 68 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 HSBP1L1C9JCN9 74 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 COX7A2LO14548 114 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 MALP21145 153 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 DDTP30046 118 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 A0A087WTM6 91 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 TINCRA0A1B0GVN0 87 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
CHRNA1-204ENST00000409323 IGHV3-64A0A075B6Q5 118 aa9.28□□□□□ -0.92
CHRNA1-204ENST00000409323 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
CHRNA1-204ENST00000409323 HERVK_113P63121 156 aa9.28□□□□□ -0.92
CHRNA1-204ENST00000409323 STPG4Q8N801 248 aa9.28□□□□□ -0.92
CHRNA1-204ENST00000409323 ZNF22P17026 224 aaPredicted RBP9.27□□□□□ -0.93
CHRNA1-204ENST00000409323 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
CHRNA1-204ENST00000409323 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
CHRNA1-204ENST00000409323 UQCR10Q9UDW1 63 aa9.27□□□□□ -0.93
CHRNA1-204ENST00000409323 FRAS1Q86XX4 4008 aa9.27□□□□□ -0.93
CHRNA1-204ENST00000409323 DLEU1O43261 78 aa9.26□□□□□ -0.93
CHRNA1-204ENST00000409323 SEC11AP67812 179 aa9.26□□□□□ -0.93
CHRNA1-204ENST00000409323 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
CHRNA1-204ENST00000409323 A0A087WZ39 114 aa9.25□□□□□ -0.93
CHRNA1-204ENST00000409323 LINC00587B1AMM8 73 aa9.25□□□□□ -0.93
CHRNA1-204ENST00000409323 COX8AP10176 69 aa9.25□□□□□ -0.93
CHRNA1-204ENST00000409323 ORAOV1Q8WV07 137 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 TOMM7Q9P0U1 55 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 KRTAP10-2P60368 255 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 Q8N814 137 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 C14orf144Q96I85 54 aa9.24□□□□□ -0.93
CHRNA1-204ENST00000409323 IGHV1-58A0A0C4DH39 117 aa9.23□□□□□ -0.93
CHRNA1-204ENST00000409323 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
CHRNA1-204ENST00000409323 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
CHRNA1-204ENST00000409323 DNAH17Q9UFH2 4485 aa9.23□□□□□ -0.93
CHRNA1-204ENST00000409323 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
CHRNA1-204ENST00000409323 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
CHRNA1-204ENST00000409323 SLC25A34Q6PIV7 304 aa9.22□□□□□ -0.93
CHRNA1-204ENST00000409323 IGKV2D-26A0A0A0MRZ7 120 aa9.21□□□□□ -0.93
CHRNA1-204ENST00000409323 E9PLD3 99 aa9.21□□□□□ -0.93
CHRNA1-204ENST00000409323 APOMO95445 188 aa9.21□□□□□ -0.93
CHRNA1-204ENST00000409323 SLPIP03973 132 aa9.21□□□□□ -0.93
CHRNA1-204ENST00000409323 CFAP161Q6P656 301 aa9.21□□□□□ -0.93
CHRNA1-204ENST00000409323 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
CHRNA1-204ENST00000409323 H3BRM9 83 aa9.2□□□□□ -0.94
CHRNA1-204ENST00000409323 EREGO14944 169 aa9.2□□□□□ -0.94
CHRNA1-204ENST00000409323 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms