RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 IGKV2D-24A0A075B6R9 120 aa13.64□□□□□ -0.23
VSX1-203ENST00000409285 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
VSX1-203ENST00000409285 CD164L2Q6UWJ8 174 aa13.64□□□□□ -0.23
VSX1-203ENST00000409285 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
VSX1-203ENST00000409285 XCL1P47992 114 aa13.62□□□□□ -0.23
VSX1-203ENST00000409285 IGHV3OR16-9A0A0B4J2B5 98 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 F8VRH5 84 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 IGLC3P0DOY3 106 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 HERVK_113P63121 156 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 FOXI1Q12951 378 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 ODF1Q14990 250 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 IGLV4-69A0A075B6H9 119 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 PET117Q6UWS5 81 aa13.61□□□□□ -0.23
VSX1-203ENST00000409285 IGLV5-45A0A087WSX0 123 aa13.6□□□□□ -0.23
VSX1-203ENST00000409285 A0A0J9YXV3 536 aa13.6□□□□□ -0.23
VSX1-203ENST00000409285 CHTOPQ9Y3Y2 248 aaKnown RBP13.6□□□□□ -0.23
VSX1-203ENST00000409285 DNAH17Q9UFH2 4485 aa13.59□□□□□ -0.23
VSX1-203ENST00000409285 C20orf202A1L168 122 aa13.59□□□□□ -0.23
VSX1-203ENST00000409285 GAGE12HA6NDE8 117 aa13.59□□□□□ -0.23
VSX1-203ENST00000409285 SCGB1D1O95968 90 aa13.59□□□□□ -0.23
VSX1-203ENST00000409285 MAPKAPK5-AS1Q8N8E1 139 aa13.58□□□□□ -0.24
VSX1-203ENST00000409285 CHAC1Q9BUX1 264 aa13.58□□□□□ -0.24
VSX1-203ENST00000409285 GEMIN7Q9H840 131 aaKnown RBP13.58□□□□□ -0.24
VSX1-203ENST00000409285 MRPL35Q9NZE8 188 aaKnown RBP13.58□□□□□ -0.24
VSX1-203ENST00000409285 PSCAO43653 123 aa13.57□□□□□ -0.24
VSX1-203ENST00000409285 COX6A2Q02221 97 aa13.57□□□□□ -0.24
VSX1-203ENST00000409285 JOSD1Q15040 202 aaPredicted RBP13.57□□□□□ -0.24
VSX1-203ENST00000409285 LINC01545Q5VT33 79 aa13.57□□□□□ -0.24
VSX1-203ENST00000409285 A0A087WZ39 114 aa13.56□□□□□ -0.24
VSX1-203ENST00000409285 RTL8CO15255 209 aa13.56□□□□□ -0.24
VSX1-203ENST00000409285 PMCHL2Q9BQD1 86 aa13.56□□□□□ -0.24
VSX1-203ENST00000409285 COX7A2LO14548 114 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 PLNP26678 52 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 PYY3Q5JQD4 70 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 LINC01561Q8N1V8 128 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 FAT2Q9NYQ8 4349 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 C11orf86A6NJI1 115 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
VSX1-203ENST00000409285 ZNF22P17026 224 aaPredicted RBP13.53□□□□□ -0.24
VSX1-203ENST00000409285 LINC00469Q8N7U9 141 aa13.53□□□□□ -0.24
VSX1-203ENST00000409285 LRCOL1A6NCL2 159 aa13.52□□□□□ -0.25
VSX1-203ENST00000409285 DPM2O94777 84 aa13.52□□□□□ -0.25
VSX1-203ENST00000409285 SMIM6P0DI80 62 aa13.51□□□□□ -0.25
VSX1-203ENST00000409285 C5orf38Q86SI9 138 aa13.51□□□□□ -0.25
VSX1-203ENST00000409285 H3BRM9 83 aa13.5□□□□□ -0.25
VSX1-203ENST00000409285 IGKCP01834 107 aa13.5□□□□□ -0.25
VSX1-203ENST00000409285 ATOH7Q8N100 152 aa13.5□□□□□ -0.25
VSX1-203ENST00000409285 IGHV1-58A0A0C4DH39 117 aa13.49□□□□□ -0.25
VSX1-203ENST00000409285 APOMO95445 188 aa13.49□□□□□ -0.25
VSX1-203ENST00000409285 MALP21145 153 aa13.49□□□□□ -0.25
VSX1-203ENST00000409285 CFAP161Q6P656 301 aa13.49□□□□□ -0.25
VSX1-203ENST00000409285 LINC00336Q6ZUF6 198 aa13.49□□□□□ -0.25
VSX1-203ENST00000409285 C15orf56Q8N910 161 aa13.49□□□□□ -0.25
VSX1-203ENST00000409285 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
VSX1-203ENST00000409285 HECTD4Q9Y4D8 3996 aa13.48□□□□□ -0.25
VSX1-203ENST00000409285 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
VSX1-203ENST00000409285 A0A087WTM6 91 aa13.48□□□□□ -0.25
VSX1-203ENST00000409285 TMEM170BQ5T4T1 132 aa13.48□□□□□ -0.25
VSX1-203ENST00000409285 GVQW2A0A096LPI5 108 aaPredicted RBP13.47□□□□□ -0.25
VSX1-203ENST00000409285 SMIM1B2RUZ4 78 aa13.47□□□□□ -0.25
VSX1-203ENST00000409285 C14orf177Q52M58 125 aa13.47□□□□□ -0.25
VSX1-203ENST00000409285 CDPF1Q6NVV7 123 aa13.47□□□□□ -0.25
VSX1-203ENST00000409285 PKD1P98161 4303 aa13.46□□□□□ -0.25
VSX1-203ENST00000409285 TNP2Q05952 138 aa13.46□□□□□ -0.25
VSX1-203ENST00000409285 WFDC2Q14508 124 aa13.46□□□□□ -0.25
VSX1-203ENST00000409285 IGLV5-39A0A0G2JS06 123 aa13.45□□□□□ -0.26
VSX1-203ENST00000409285 TMEM223A0PJW6 202 aa13.45□□□□□ -0.26
VSX1-203ENST00000409285 LECT2O14960 151 aa13.43□□□□□ -0.26
VSX1-203ENST00000409285 ORAOV1Q8WV07 137 aa13.43□□□□□ -0.26
VSX1-203ENST00000409285 SPINK8P0C7L1 97 aa13.42□□□□□ -0.26
VSX1-203ENST00000409285 Q8N814 137 aa13.42□□□□□ -0.26
VSX1-203ENST00000409285 C12orf57Q99622 126 aa13.42□□□□□ -0.26
VSX1-203ENST00000409285 EPPK1P58107 5090 aaKnown RBP13.42□□□□□ -0.26
VSX1-203ENST00000409285 Q8IZM0 81 aa13.42□□□□□ -0.26
VSX1-203ENST00000409285 DNAH11Q96DT5 4516 aa13.41□□□□□ -0.26
VSX1-203ENST00000409285 EREGO14944 169 aa13.41□□□□□ -0.26
VSX1-203ENST00000409285 KIAA0087Q14695 138 aa13.41□□□□□ -0.26
VSX1-203ENST00000409285 VAMP8Q9BV40 100 aa13.41□□□□□ -0.26
VSX1-203ENST00000409285 hDV102S1A0JD36 115 aa13.4□□□□□ -0.26
VSX1-203ENST00000409285 HSBP1L1C9JCN9 74 aa13.4□□□□□ -0.26
VSX1-203ENST00000409285 SPAG11BQ08648 103 aa13.4□□□□□ -0.26
VSX1-203ENST00000409285 MAJINQ3KP22 176 aa13.4□□□□□ -0.26
VSX1-203ENST00000409285 LINC00518Q8N0U6 118 aa13.4□□□□□ -0.26
VSX1-203ENST00000409285 F8WDY8 70 aa13.39□□□□□ -0.27
VSX1-203ENST00000409285 ZNF561-AS1K7EIQ3 104 aa13.39□□□□□ -0.27
VSX1-203ENST00000409285 HERVK_113P61574 105 aa13.39□□□□□ -0.27
VSX1-203ENST00000409285 S100A12P80511 92 aa13.39□□□□□ -0.27
VSX1-203ENST00000409285 C2orf48Q96LS8 159 aa13.39□□□□□ -0.27
VSX1-203ENST00000409285 HIGD2BQ4VC39 106 aa13.38□□□□□ -0.27
VSX1-203ENST00000409285 STPG4Q8N801 248 aa13.38□□□□□ -0.27
VSX1-203ENST00000409285 PAM16Q9Y3D7 125 aa13.38□□□□□ -0.27
VSX1-203ENST00000409285 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
VSX1-203ENST00000409285 NTN5Q8WTR8 489 aaPredicted RBP13.37□□□□□ -0.27
VSX1-203ENST00000409285 E9PLD3 99 aa13.36□□□□□ -0.27
VSX1-203ENST00000409285 COX7B2Q8TF08 81 aa13.36□□□□□ -0.27
VSX1-203ENST00000409285 PRSS2P07478 247 aa13.36□□□□□ -0.27
VSX1-203ENST00000409285 CXCL5P42830 114 aa13.36□□□□□ -0.27
VSX1-203ENST00000409285 TOMM7Q9P0U1 55 aa13.35□□□□□ -0.27
VSX1-203ENST00000409285 PKHD1P08F94 4074 aa13.34□□□□□ -0.27
VSX1-203ENST00000409285 LEPROTO15243 131 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms