RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
CHMP3-203ENST00000409225 BORCS7Q96B45 105 aa9.76□□□□□ -0.85
CHMP3-203ENST00000409225 FSIP2Q5CZC0 6907 aa9.76□□□□□ -0.85
CHMP3-203ENST00000409225 IGHV3OR16-9A0A0B4J2B5 98 aa9.75□□□□□ -0.85
CHMP3-203ENST00000409225 A8MWL6 223 aa9.75□□□□□ -0.85
CHMP3-203ENST00000409225 CRYGAP11844 174 aa9.75□□□□□ -0.85
CHMP3-203ENST00000409225 AMN1Q8IY45 258 aa9.75□□□□□ -0.85
CHMP3-203ENST00000409225 KIR2DL4Q99706 377 aa9.75□□□□□ -0.85
CHMP3-203ENST00000409225 TMEM191AQ9H0A3 160 aa9.75□□□□□ -0.85
CHMP3-203ENST00000409225 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
CHMP3-203ENST00000409225 NUPR1O60356 82 aa9.73□□□□□ -0.85
CHMP3-203ENST00000409225 TMEM18Q96B42 140 aa9.73□□□□□ -0.85
CHMP3-203ENST00000409225 CTDSP1Q9GZU7 261 aa9.73□□□□□ -0.85
CHMP3-203ENST00000409225 HMSDA8MTL9 139 aa9.72□□□□□ -0.85
CHMP3-203ENST00000409225 NDUFC2-KCTD14E9PQ53 114 aa9.72□□□□□ -0.85
CHMP3-203ENST00000409225 SUMO2P61956 95 aaKnown RBP9.72□□□□□ -0.85
CHMP3-203ENST00000409225 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
CHMP3-203ENST00000409225 TRBV30A0A0K0K1B3 111 aa9.71□□□□□ -0.86
CHMP3-203ENST00000409225 A0A1B0GUT8 65 aa9.71□□□□□ -0.86
CHMP3-203ENST00000409225 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.86
CHMP3-203ENST00000409225 KIAA0087Q14695 138 aa9.71□□□□□ -0.86
CHMP3-203ENST00000409225 C2orf82Q6UX34 121 aa9.71□□□□□ -0.86
CHMP3-203ENST00000409225 NRACQ8N912 160 aa9.71□□□□□ -0.86
CHMP3-203ENST00000409225 ANAPC11Q9NYG5 84 aa9.71□□□□□ -0.86
CHMP3-203ENST00000409225 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
CHMP3-203ENST00000409225 FAM231DQ6ZW35 169 aa9.7□□□□□ -0.86
CHMP3-203ENST00000409225 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
CHMP3-203ENST00000409225 IFITM10A6NMD0 228 aa9.69□□□□□ -0.86
CHMP3-203ENST00000409225 HIGD1CA8MV81 97 aa9.69□□□□□ -0.86
CHMP3-203ENST00000409225 RPL28P46779 137 aaKnown RBP9.69□□□□□ -0.86
CHMP3-203ENST00000409225 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
CHMP3-203ENST00000409225 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
CHMP3-203ENST00000409225 TGIF2-C20orf24A0A0A6YYL0 155 aa9.68□□□□□ -0.86
CHMP3-203ENST00000409225 PPP1R17O96001 155 aa9.68□□□□□ -0.86
CHMP3-203ENST00000409225 HBBP68871 147 aa9.68□□□□□ -0.86
CHMP3-203ENST00000409225 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
CHMP3-203ENST00000409225 CT83Q5H943 113 aa9.68□□□□□ -0.86
CHMP3-203ENST00000409225 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
CHMP3-203ENST00000409225 PPP1R2P9O14990 202 aa9.67□□□□□ -0.86
CHMP3-203ENST00000409225 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
CHMP3-203ENST00000409225 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
CHMP3-203ENST00000409225 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-203ENST00000409225 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
CHMP3-203ENST00000409225 BCE1O60756 84 aa9.65□□□□□ -0.86
CHMP3-203ENST00000409225 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
CHMP3-203ENST00000409225 LINC01547P58512 204 aaPredicted RBP9.65□□□□□ -0.86
CHMP3-203ENST00000409225 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
CHMP3-203ENST00000409225 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
CHMP3-203ENST00000409225 ZNF727A8MUV8 499 aa9.63□□□□□ -0.87
CHMP3-203ENST00000409225 RIGQ13278 110 aa9.63□□□□□ -0.87
CHMP3-203ENST00000409225 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
CHMP3-203ENST00000409225 CEBPGP53567 150 aa9.62□□□□□ -0.87
CHMP3-203ENST00000409225 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
CHMP3-203ENST00000409225 MRPL55Q7Z7F7 128 aaKnown RBP9.61□□□□□ -0.87
CHMP3-203ENST00000409225 C20orf78Q9BR46 151 aa9.61□□□□□ -0.87
CHMP3-203ENST00000409225 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
CHMP3-203ENST00000409225 TCAPO15273 167 aa9.6□□□□□ -0.87
CHMP3-203ENST00000409225 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
CHMP3-203ENST00000409225 TMEM250H0YL14 139 aa9.59□□□□□ -0.87
CHMP3-203ENST00000409225 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
CHMP3-203ENST00000409225 FAM104BQ5XKR9 115 aa9.59□□□□□ -0.87
CHMP3-203ENST00000409225 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
CHMP3-203ENST00000409225 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
CHMP3-203ENST00000409225 FAM229BQ4G0N7 80 aa9.58□□□□□ -0.88
CHMP3-203ENST00000409225 SMIM2Q9BVW6 85 aa9.58□□□□□ -0.88
CHMP3-203ENST00000409225 TP73-AS1Q9UF72 201 aa9.58□□□□□ -0.88
CHMP3-203ENST00000409225 TNFRSF6BO95407 300 aa9.57□□□□□ -0.88
CHMP3-203ENST00000409225 PRSS2P07478 247 aa9.57□□□□□ -0.88
CHMP3-203ENST00000409225 CKS2P33552 79 aa9.57□□□□□ -0.88
CHMP3-203ENST00000409225 CKS1BP61024 79 aa9.57□□□□□ -0.88
CHMP3-203ENST00000409225 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
CHMP3-203ENST00000409225 RGS21Q2M5E4 152 aa9.57□□□□□ -0.88
CHMP3-203ENST00000409225 TRBV24-1A0A075B6N3 115 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 IGKV2D-26A0A0A0MRZ7 120 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 LINC00862A6NCI5 91 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
CHMP3-203ENST00000409225 UBE2AP49459 152 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 LINC01551Q86U37 167 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 OSTCQ9NRP0 149 aa9.56□□□□□ -0.88
CHMP3-203ENST00000409225 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
CHMP3-203ENST00000409225 GAGE10A6NGK3 116 aa9.55□□□□□ -0.88
CHMP3-203ENST00000409225 C6orf226Q5I0X4 101 aa9.55□□□□□ -0.88
CHMP3-203ENST00000409225 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
CHMP3-203ENST00000409225 SMIM7Q9BQ49 75 aa9.54□□□□□ -0.88
CHMP3-203ENST00000409225 KRTAP4-1Q9BYQ7 146 aa9.54□□□□□ -0.88
CHMP3-203ENST00000409225 V9GYV3 84 aa9.54□□□□□ -0.88
CHMP3-203ENST00000409225 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
CHMP3-203ENST00000409225 LINC00337Q8N6G1 96 aa9.53□□□□□ -0.88
CHMP3-203ENST00000409225 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
CHMP3-203ENST00000409225 D6R8Y8 96 aa9.52□□□□□ -0.89
CHMP3-203ENST00000409225 ASB16-AS1Q495Z4 193 aa9.52□□□□□ -0.89
CHMP3-203ENST00000409225 Q6ZN92 141 aa9.52□□□□□ -0.89
CHMP3-203ENST00000409225 NAT8BQ9UHF3 227 aa9.52□□□□□ -0.89
CHMP3-203ENST00000409225 NPYP01303 97 aa9.51□□□□□ -0.89
CHMP3-203ENST00000409225 CTAG1AP78358 180 aa9.51□□□□□ -0.89
CHMP3-203ENST00000409225 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
CHMP3-203ENST00000409225 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
CHMP3-203ENST00000409225 Q8IZM0 81 aa9.51□□□□□ -0.89
CHMP3-203ENST00000409225 ALKBH7Q9BT30 221 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms