RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 CEP290O15078 2479 aa8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 POLR2KP53803 58 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 DOPEY2Q9Y3R5 2298 aa8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 H0Y9P7 68 aa8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 XGP55808 180 aa8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 ARHGAP21Q5T5U3 1957 aa8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 UNQ6190/PRO20217Q6UXQ8 127 aa8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 TRBV7-7A0A0K0K1E9 115 aa8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 EP300Q09472 2414 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 IGLV1-40P01703 118 aa8.93□□□□□ -0.98
CACNA1C-219ENST00000399649 Q6ZPA2 131 aa8.92□□□□□ -0.98
CACNA1C-219ENST00000399649 NUP210LQ5VU65 1888 aa8.92□□□□□ -0.98
CACNA1C-219ENST00000399649 ZGRF1Q86YA3 2104 aa8.92□□□□□ -0.98
CACNA1C-219ENST00000399649 Q8N6K4 173 aa8.92□□□□□ -0.98
CACNA1C-219ENST00000399649 C11orf21Q9P2W6 132 aa8.92□□□□□ -0.98
CACNA1C-219ENST00000399649 BEAN1Q3B7T3 259 aa8.92□□□□□ -0.98
CACNA1C-219ENST00000399649 A0A087WYN8 130 aa8.91□□□□□ -0.98
CACNA1C-219ENST00000399649 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
CACNA1C-219ENST00000399649 PKDREJQ9NTG1 2253 aa8.91□□□□□ -0.98
CACNA1C-219ENST00000399649 C2orf16Q68DN1 1984 aa8.91□□□□□ -0.98
CACNA1C-219ENST00000399649 CHCHD7Q9BUK0 85 aa8.9□□□□□ -0.98
CACNA1C-219ENST00000399649 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
CACNA1C-219ENST00000399649 LIMD2Q9BT23 127 aa8.9□□□□□ -0.98
CACNA1C-219ENST00000399649 F8WDY8 70 aa8.9□□□□□ -0.99
CACNA1C-219ENST00000399649 PSPHP1O15172 72 aa8.89□□□□□ -0.99
CACNA1C-219ENST00000399649 NOTCH4Q99466 2003 aa8.89□□□□□ -0.99
CACNA1C-219ENST00000399649 ABCA1O95477 2261 aa8.89□□□□□ -0.99
CACNA1C-219ENST00000399649 COX6A2Q02221 97 aa8.89□□□□□ -0.99
CACNA1C-219ENST00000399649 DSCAML1Q8TD84 2053 aa8.89□□□□□ -0.99
CACNA1C-219ENST00000399649 LINC00242Q5T6M2 205 aa8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 NCOA6Q14686 2063 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 CRYGAP11844 174 aa8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 KIAA1549Q9HCM3 1950 aa8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 IGIPA6NJ69 53 aa8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 LINC00575Q6W349 94 aa8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 CRIP2P52943 208 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-219ENST00000399649 SBSPONQ8IVN8 264 aa8.87□□□□□ -0.99
CACNA1C-219ENST00000399649 COL4A3Q01955 1670 aa8.87□□□□□ -0.99
CACNA1C-219ENST00000399649 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
CACNA1C-219ENST00000399649 YPEL4Q96NS1 127 aa8.87□□□□□ -0.99
CACNA1C-219ENST00000399649 HCG22E2RYF7 251 aa8.87□□□□□ -0.99
CACNA1C-219ENST00000399649 LTBP2Q14767 1821 aa8.87□□□□□ -0.99
CACNA1C-219ENST00000399649 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
CACNA1C-219ENST00000399649 ALPK3Q96L96 1907 aa8.86□□□□□ -0.99
CACNA1C-219ENST00000399649 A0A087WVE0 104 aa8.86□□□□□ -0.99
CACNA1C-219ENST00000399649 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
CACNA1C-219ENST00000399649 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
CACNA1C-219ENST00000399649 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 CRIP3Q6Q6R5 217 aa8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 Q8N3U1 123 aa8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 SPTBN2O15020 2390 aa8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
CACNA1C-219ENST00000399649 A0A087WSZ3 146 aa8.84□□□□□ -0.99
CACNA1C-219ENST00000399649 PRO3102Q9H379 93 aa8.84□□□□□ -0.99
CACNA1C-219ENST00000399649 ATRXP46100 2492 aa8.84□□□□□ -1
CACNA1C-219ENST00000399649 BRI3O95415 125 aa8.83□□□□□ -1
CACNA1C-219ENST00000399649 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
CACNA1C-219ENST00000399649 hDV103S1A0JD37 113 aa8.83□□□□□ -1
CACNA1C-219ENST00000399649 FHL2Q14192 279 aa8.82□□□□□ -1
CACNA1C-219ENST00000399649 LINC00337Q8N6G1 96 aa8.82□□□□□ -1
CACNA1C-219ENST00000399649 CNFNQ9BYD5 112 aa8.82□□□□□ -1
CACNA1C-219ENST00000399649 NCOR1O75376 2440 aa8.82□□□□□ -1
CACNA1C-219ENST00000399649 EDN2P20800 178 aa8.81□□□□□ -1
CACNA1C-219ENST00000399649 Q6ZTC4 211 aa8.81□□□□□ -1
CACNA1C-219ENST00000399649 ACACAQ13085 2346 aa8.8□□□□□ -1
CACNA1C-219ENST00000399649 PRLHP81277 87 aa8.8□□□□□ -1
CACNA1C-219ENST00000399649 ODF3L2Q3SX64 289 aa8.8□□□□□ -1
CACNA1C-219ENST00000399649 SMR3AQ99954 134 aa8.79□□□□□ -1
CACNA1C-219ENST00000399649 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
CACNA1C-219ENST00000399649 IGKV2-30P06310 120 aa8.79□□□□□ -1
CACNA1C-219ENST00000399649 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
CACNA1C-219ENST00000399649 PCNX2A6NKB5 2137 aa8.78□□□□□ -1
CACNA1C-219ENST00000399649 IGLV1-51P01701 117 aa8.78□□□□□ -1
CACNA1C-219ENST00000399649 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
CACNA1C-219ENST00000399649 A0A1B0GU69 56 aa8.78□□□□□ -1
CACNA1C-219ENST00000399649 ROS1P08922 2347 aa8.77□□□□□ -1.01
CACNA1C-219ENST00000399649 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
CACNA1C-219ENST00000399649 ADAMTSL4-AS1Q5T5F5 129 aa8.77□□□□□ -1.01
CACNA1C-219ENST00000399649 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
CACNA1C-219ENST00000399649 LYPD5Q6UWN5 251 aa8.76□□□□□ -1.01
CACNA1C-219ENST00000399649 AMELXQ99217 191 aa8.76□□□□□ -1.01
CACNA1C-219ENST00000399649 C16orf95Q9H693 158 aa8.76□□□□□ -1.01
CACNA1C-219ENST00000399649 TANC2Q9HCD6 1990 aa8.75□□□□□ -1.01
CACNA1C-219ENST00000399649 CXCL6P80162 114 aa8.75□□□□□ -1.01
CACNA1C-219ENST00000399649 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
CACNA1C-219ENST00000399649 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
CACNA1C-219ENST00000399649 Q8N2B8 174 aa8.74□□□□□ -1.01
CACNA1C-219ENST00000399649 A0A1B0GUV1 79 aa8.74□□□□□ -1.01
CACNA1C-219ENST00000399649 ACYP2P14621 99 aa8.73□□□□□ -1.01
CACNA1C-219ENST00000399649 Q6ZRU5 148 aa8.73□□□□□ -1.01
CACNA1C-219ENST00000399649 DSCAMO60469 2012 aa8.72□□□□□ -1.01
CACNA1C-219ENST00000399649 AVPP01185 164 aa8.72□□□□□ -1.01
CACNA1C-219ENST00000399649 Q9UF83 564 aa8.72□□□□□ -1.01
CACNA1C-219ENST00000399649 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
CACNA1C-219ENST00000399649 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.72□□□□□ -1.01
CACNA1C-219ENST00000399649 SMIM29Q86T20 159 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms