RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-213ENST00000399629 FHL3Q13643 280 aa8.74□□□□□ -1.01
CACNA1C-213ENST00000399629 PLCE1Q9P212 2302 aa8.74□□□□□ -1.01
CACNA1C-213ENST00000399629 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 CRIP1P50238 77 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 PRR9Q5T870 116 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
CACNA1C-213ENST00000399629 J3QL48 77 aa8.72□□□□□ -1.01
CACNA1C-213ENST00000399629 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
CACNA1C-213ENST00000399629 C2orf48Q96LS8 159 aa8.72□□□□□ -1.01
CACNA1C-213ENST00000399629 Q6Q795 121 aa8.72□□□□□ -1.01
CACNA1C-213ENST00000399629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.71□□□□□ -1.01
CACNA1C-213ENST00000399629 OTOGLQ3ZCN5 2332 aa8.71□□□□□ -1.01
CACNA1C-213ENST00000399629 PTH2Q96A98 100 aa8.71□□□□□ -1.02
CACNA1C-213ENST00000399629 CDC42SE2Q9NRR3 84 aa8.71□□□□□ -1.02
CACNA1C-213ENST00000399629 RAI1Q7Z5J4 1906 aaPredicted RBP8.71□□□□□ -1.02
CACNA1C-213ENST00000399629 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
CACNA1C-213ENST00000399629 NBASA2RRP1 2371 aa8.71□□□□□ -1.02
CACNA1C-213ENST00000399629 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 SMIM11BQ8TCY0 68 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 C11orf1Q9H5F2 150 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 J3KT08 172 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 COX6A2Q02221 97 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 TIMM17BO60830 172 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-213ENST00000399629 TNCP24821 2201 aa8.69□□□□□ -1.02
CACNA1C-213ENST00000399629 Q9BRP9 147 aa8.69□□□□□ -1.02
CACNA1C-213ENST00000399629 FAM208BQ5VWN6 2430 aa8.69□□□□□ -1.02
CACNA1C-213ENST00000399629 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
CACNA1C-213ENST00000399629 FHL2Q14192 279 aa8.69□□□□□ -1.02
CACNA1C-213ENST00000399629 TRIAP1O43715 76 aa8.69□□□□□ -1.02
CACNA1C-213ENST00000399629 KIAA1549Q9HCM3 1950 aa8.68□□□□□ -1.02
CACNA1C-213ENST00000399629 F8WDY8 70 aa8.68□□□□□ -1.02
CACNA1C-213ENST00000399629 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
CACNA1C-213ENST00000399629 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
CACNA1C-213ENST00000399629 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 C9orf116Q5BN46 136 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 MED12LQ86YW9 2145 aa8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 POM121L12Q8N7R1 296 aa8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 NOTCH3Q9UM47 2321 aa8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 CACNA1HO95180 2353 aa8.67□□□□□ -1.02
CACNA1C-213ENST00000399629 Q6ZPA2 131 aa8.66□□□□□ -1.02
CACNA1C-213ENST00000399629 Q6JHZ5 121 aa8.66□□□□□ -1.02
CACNA1C-213ENST00000399629 PCDH15Q96QU1 1955 aa8.65□□□□□ -1.02
CACNA1C-213ENST00000399629 NRACQ8N912 160 aa8.64□□□□□ -1.03
CACNA1C-213ENST00000399629 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
CACNA1C-213ENST00000399629 V9GYY9 64 aa8.64□□□□□ -1.03
CACNA1C-213ENST00000399629 C11orf21Q9P2W6 132 aa8.64□□□□□ -1.03
CACNA1C-213ENST00000399629 TRBV10-3A0A0K0K1G6 114 aa8.64□□□□□ -1.03
CACNA1C-213ENST00000399629 PCNX3Q9H6A9 2034 aa8.64□□□□□ -1.03
CACNA1C-213ENST00000399629 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
CACNA1C-213ENST00000399629 IGLV4-60A0A075B6I1 120 aa8.62□□□□□ -1.03
CACNA1C-213ENST00000399629 CRIP2P52943 208 aaPredicted RBP8.62□□□□□ -1.03
CACNA1C-213ENST00000399629 SPINK1P00995 79 aa8.62□□□□□ -1.03
CACNA1C-213ENST00000399629 MAPKAPK5-AS1Q8N8E1 139 aa8.62□□□□□ -1.03
CACNA1C-213ENST00000399629 RNASE8Q8TDE3 154 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-213ENST00000399629 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
CACNA1C-213ENST00000399629 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
CACNA1C-213ENST00000399629 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
CACNA1C-213ENST00000399629 A0A1W2PPR1 153 aa8.6□□□□□ -1.03
CACNA1C-213ENST00000399629 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
CACNA1C-213ENST00000399629 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
CACNA1C-213ENST00000399629 CRIP3Q6Q6R5 217 aa8.6□□□□□ -1.03
CACNA1C-213ENST00000399629 LRP4O75096 1905 aa8.59□□□□□ -1.03
CACNA1C-213ENST00000399629 A6NED7 52 aa8.59□□□□□ -1.03
CACNA1C-213ENST00000399629 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
CACNA1C-213ENST00000399629 EXPH5Q8NEV8 1989 aa8.58□□□□□ -1.04
CACNA1C-213ENST00000399629 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-213ENST00000399629 TANC2Q9HCD6 1990 aa8.58□□□□□ -1.04
CACNA1C-213ENST00000399629 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
CACNA1C-213ENST00000399629 MUC22E2RYF6 1773 aaPredicted RBP8.58□□□□□ -1.04
CACNA1C-213ENST00000399629 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
CACNA1C-213ENST00000399629 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 DSCAML1Q8TD84 2053 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 MED13LQ71F56 2210 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 PRLHP81277 87 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 SBSPONQ8IVN8 264 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 ZNF580Q9UK33 172 aa8.57□□□□□ -1.04
CACNA1C-213ENST00000399629 NDUFC1O43677 76 aa8.56□□□□□ -1.04
CACNA1C-213ENST00000399629 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
CACNA1C-213ENST00000399629 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
CACNA1C-213ENST00000399629 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
CACNA1C-213ENST00000399629 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
CACNA1C-213ENST00000399629 Q6ZRU5 148 aa8.55□□□□□ -1.04
CACNA1C-213ENST00000399629 RTL8CO15255 209 aa8.55□□□□□ -1.04
CACNA1C-213ENST00000399629 Q8N814 137 aa8.55□□□□□ -1.04
CACNA1C-213ENST00000399629 Q8N2B8 174 aa8.55□□□□□ -1.04
CACNA1C-213ENST00000399629 YPEL4Q96NS1 127 aa8.55□□□□□ -1.04
CACNA1C-213ENST00000399629 C22orf24Q9Y442 160 aa8.54□□□□□ -1.04
CACNA1C-213ENST00000399629 UQCRQO14949 82 aa8.54□□□□□ -1.04
CACNA1C-213ENST00000399629 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
CACNA1C-213ENST00000399629 SMCR5Q8TEV8 140 aa8.54□□□□□ -1.04
CACNA1C-213ENST00000399629 SMIM1B2RUZ4 78 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms