RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
CACNA1C-208ENST00000399601 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
CACNA1C-208ENST00000399601 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
CACNA1C-208ENST00000399601 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
CACNA1C-208ENST00000399601 C19orf71A6NCJ1 209 aa8.18□□□□□ -1.1
CACNA1C-208ENST00000399601 PSMG3-AS1Q96PY0 264 aa8.17□□□□□ -1.1
CACNA1C-208ENST00000399601 PRO3102Q9H379 93 aa8.17□□□□□ -1.1
CACNA1C-208ENST00000399601 IBA57-AS1B1ANH7 110 aa8.16□□□□□ -1.1
CACNA1C-208ENST00000399601 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
CACNA1C-208ENST00000399601 C18orf65Q6ZTR6 163 aa8.15□□□□□ -1.1
CACNA1C-208ENST00000399601 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
CACNA1C-208ENST00000399601 DSCAML1Q8TD84 2053 aa8.15□□□□□ -1.1
CACNA1C-208ENST00000399601 A0A087WSZ3 146 aa8.15□□□□□ -1.1
CACNA1C-208ENST00000399601 H7C423 109 aa8.15□□□□□ -1.1
CACNA1C-208ENST00000399601 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
CACNA1C-208ENST00000399601 IGLV1-47P01700 117 aa8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 EML6Q6ZMW3 1958 aa8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 EP400Q96L91 3159 aa8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 LINC00575Q6W349 94 aa8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 C1orf64Q8NEQ6 169 aa8.15□□□□□ -1.11
CACNA1C-208ENST00000399601 PTPRDP23468 1912 aa8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 RLFQ13129 1914 aa8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 IMUPQ9GZP8 106 aa8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 TNCP24821 2201 aa8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 NUP210Q8TEM1 1887 aaPredicted RBP8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 TECTAO75443 2155 aa8.14□□□□□ -1.11
CACNA1C-208ENST00000399601 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
CACNA1C-208ENST00000399601 MRPS36P82909 103 aaKnown RBP8.13□□□□□ -1.11
CACNA1C-208ENST00000399601 A0A087WYN8 130 aa8.13□□□□□ -1.11
CACNA1C-208ENST00000399601 LELP1Q5T871 98 aa8.13□□□□□ -1.11
CACNA1C-208ENST00000399601 CACNA1HO95180 2353 aa8.13□□□□□ -1.11
CACNA1C-208ENST00000399601 RSPO1Q2MKA7 263 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-208ENST00000399601 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
CACNA1C-208ENST00000399601 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
CACNA1C-208ENST00000399601 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
CACNA1C-208ENST00000399601 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
CACNA1C-208ENST00000399601 E7EUB6 86 aa8.11□□□□□ -1.11
CACNA1C-208ENST00000399601 K7EQG2 157 aa8.11□□□□□ -1.11
CACNA1C-208ENST00000399601 C11orf71Q6IPW1 123 aa8.11□□□□□ -1.11
CACNA1C-208ENST00000399601 LINC00959A0A1B0GUT2 108 aa8.11□□□□□ -1.11
CACNA1C-208ENST00000399601 IGLV3-1P01715 115 aa8.1□□□□□ -1.11
CACNA1C-208ENST00000399601 UTRNP46939 3433 aa8.1□□□□□ -1.11
CACNA1C-208ENST00000399601 HELZP42694 1942 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-208ENST00000399601 KIF26AQ9ULI4 1882 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 NOTCH2Q04721 2471 aa8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 ZNF524Q96C55 264 aa8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 TRBV10-3A0A0K0K1G6 114 aa8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 A8MTW9 85 aa8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 SMIM29Q86T20 159 aa8.09□□□□□ -1.11
CACNA1C-208ENST00000399601 Q6JHZ5 121 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 CD164L2Q6UWJ8 174 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 Q8N3U1 123 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 NTM-AS1Q6ZSK4 140 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
CACNA1C-208ENST00000399601 C1orf229Q6ZS94 237 aaPredicted RBP8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 UNQ6190/PRO20217Q6UXQ8 127 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 Q8N6K4 173 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 ODF3Q96PU9 254 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 LIMD2Q9BT23 127 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 PTPN13Q12923 2485 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 Q6ZS46 218 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 Q6ZTC4 211 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 MED13Q9UHV7 2174 aa8.07□□□□□ -1.12
CACNA1C-208ENST00000399601 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
CACNA1C-208ENST00000399601 DSCAMO60469 2012 aa8.06□□□□□ -1.12
CACNA1C-208ENST00000399601 CXCL6P80162 114 aa8.06□□□□□ -1.12
CACNA1C-208ENST00000399601 NRACQ8N912 160 aa8.05□□□□□ -1.12
CACNA1C-208ENST00000399601 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-208ENST00000399601 Q8N814 137 aa8.04□□□□□ -1.12
CACNA1C-208ENST00000399601 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
CACNA1C-208ENST00000399601 COX6A2Q02221 97 aa8.04□□□□□ -1.12
CACNA1C-208ENST00000399601 MRGPRG-AS1Q2M3A8 158 aa8.04□□□□□ -1.12
CACNA1C-208ENST00000399601 FAM167A-AS1Q96KT0 104 aa8.04□□□□□ -1.12
CACNA1C-208ENST00000399601 PLA2G2DQ9UNK4 145 aa8.04□□□□□ -1.12
CACNA1C-208ENST00000399601 WIPF1O43516 503 aa8.03□□□□□ -1.12
CACNA1C-208ENST00000399601 A0A0D9SG42 100 aa8.03□□□□□ -1.12
CACNA1C-208ENST00000399601 MOBPQ13875 183 aa8.03□□□□□ -1.12
CACNA1C-208ENST00000399601 MUC7Q8TAX7 377 aa8.03□□□□□ -1.12
CACNA1C-208ENST00000399601 Q96NJ1 140 aa8.03□□□□□ -1.12
CACNA1C-208ENST00000399601 FAM19A4Q96LR4 140 aa8.02□□□□□ -1.13
CACNA1C-208ENST00000399601 CSNK1G2-AS1Q8NCQ2 148 aa8.01□□□□□ -1.13
CACNA1C-208ENST00000399601 M0QY20 66 aa8.01□□□□□ -1.13
CACNA1C-208ENST00000399601 C16orf95Q9H693 158 aa8.01□□□□□ -1.13
CACNA1C-208ENST00000399601 C1orf147Q96MC9 270 aaPredicted RBP8□□□□□ -1.13
CACNA1C-208ENST00000399601 RNF185Q96GF1 192 aa8□□□□□ -1.13
CACNA1C-208ENST00000399601 TSHBP01222 138 aa8□□□□□ -1.13
CACNA1C-208ENST00000399601 KRTAP27-1Q3LI81 207 aa7.99□□□□□ -1.13
CACNA1C-208ENST00000399601 SONP18583 2426 aaKnown RBP7.99□□□□□ -1.13
CACNA1C-208ENST00000399601 IGLV6-57P01721 117 aa7.99□□□□□ -1.13
CACNA1C-208ENST00000399601 EDN2P20800 178 aa7.99□□□□□ -1.13
CACNA1C-208ENST00000399601 ATRXP46100 2492 aa7.99□□□□□ -1.13
CACNA1C-208ENST00000399601 COL4A4P53420 1690 aaPredicted RBP7.99□□□□□ -1.13
CACNA1C-208ENST00000399601 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms