RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 LINC00469Q8N7U9 141 aa15.83■□□□□ 0.12
TSPAN4-202ENST00000397396 Q9HAA7 133 aa15.83■□□□□ 0.12
TSPAN4-202ENST00000397396 TM2D2Q9BX73 214 aa15.82■□□□□ 0.12
TSPAN4-202ENST00000397396 TENM2Q9NT68 2774 aa15.81■□□□□ 0.12
TSPAN4-202ENST00000397396 IGKV2D-24A0A075B6R9 120 aa15.81■□□□□ 0.12
TSPAN4-202ENST00000397396 PYY3Q5JQD4 70 aa15.81■□□□□ 0.12
TSPAN4-202ENST00000397396 TMEM170BQ5T4T1 132 aa15.81■□□□□ 0.12
TSPAN4-202ENST00000397396 KRTAP1-5Q9BYS1 174 aa15.81■□□□□ 0.12
TSPAN4-202ENST00000397396 IGHV3OR16-9A0A0B4J2B5 98 aa15.8■□□□□ 0.12
TSPAN4-202ENST00000397396 ZNF22P17026 224 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-202ENST00000397396 GAGE12HA6NDE8 117 aa15.79■□□□□ 0.12
TSPAN4-202ENST00000397396 HERVK_113P61574 105 aa15.79■□□□□ 0.12
TSPAN4-202ENST00000397396 LINC01561Q8N1V8 128 aa15.79■□□□□ 0.12
TSPAN4-202ENST00000397396 HSBP1L1C9JCN9 74 aa15.78■□□□□ 0.12
TSPAN4-202ENST00000397396 COX7A2LO14548 114 aa15.78■□□□□ 0.12
TSPAN4-202ENST00000397396 SMIM6P0DI80 62 aa15.78■□□□□ 0.12
TSPAN4-202ENST00000397396 COX6A2Q02221 97 aa15.78■□□□□ 0.12
TSPAN4-202ENST00000397396 FOXI1Q12951 378 aa15.77■□□□□ 0.12
TSPAN4-202ENST00000397396 CDKN2A-AS1Q9UH64 79 aa15.77■□□□□ 0.12
TSPAN4-202ENST00000397396 A0A087WZ39 114 aa15.76■□□□□ 0.11
TSPAN4-202ENST00000397396 Q6ZR54 194 aa15.76■□□□□ 0.11
TSPAN4-202ENST00000397396 ALMS1Q8TCU4 4167 aa15.75■□□□□ 0.11
TSPAN4-202ENST00000397396 MALP21145 153 aa15.75■□□□□ 0.11
TSPAN4-202ENST00000397396 ATOH7Q8N100 152 aa15.75■□□□□ 0.11
TSPAN4-202ENST00000397396 VPS13DQ5THJ4 4388 aa15.75■□□□□ 0.11
TSPAN4-202ENST00000397396 APOMO95445 188 aa15.74■□□□□ 0.11
TSPAN4-202ENST00000397396 LCE6AA0A183 80 aa15.73■□□□□ 0.11
TSPAN4-202ENST00000397396 TMEM223A0PJW6 202 aa15.73■□□□□ 0.11
TSPAN4-202ENST00000397396 KRTAP26-1Q6PEX3 210 aa15.73■□□□□ 0.11
TSPAN4-202ENST00000397396 C5orf38Q86SI9 138 aa15.73■□□□□ 0.11
TSPAN4-202ENST00000397396 LYSTQ99698 3801 aa15.73■□□□□ 0.11
TSPAN4-202ENST00000397396 M0R2N4 97 aa15.72■□□□□ 0.11
TSPAN4-202ENST00000397396 PSCAO43653 123 aa15.71■□□□□ 0.11
TSPAN4-202ENST00000397396 C6orf223Q8N319 242 aa15.71■□□□□ 0.11
TSPAN4-202ENST00000397396 VAMP8Q9BV40 100 aa15.71■□□□□ 0.11
TSPAN4-202ENST00000397396 S100A12P80511 92 aa15.7■□□□□ 0.1
TSPAN4-202ENST00000397396 CFAP161Q6P656 301 aa15.7■□□□□ 0.1
TSPAN4-202ENST00000397396 SMIM1B2RUZ4 78 aa15.69■□□□□ 0.1
TSPAN4-202ENST00000397396 IGHV1-58A0A0C4DH39 117 aa15.68■□□□□ 0.1
TSPAN4-202ENST00000397396 E9PLD3 99 aa15.68■□□□□ 0.1
TSPAN4-202ENST00000397396 SPINK8P0C7L1 97 aa15.68■□□□□ 0.1
TSPAN4-202ENST00000397396 C1orf134Q5TEV5 83 aa15.68■□□□□ 0.1
TSPAN4-202ENST00000397396 STPG4Q8N801 248 aa15.68■□□□□ 0.1
TSPAN4-202ENST00000397396 DNAH1Q9P2D7 4330 aa15.67■□□□□ 0.1
TSPAN4-202ENST00000397396 IGLV5-39A0A0G2JS06 123 aa15.67■□□□□ 0.1
TSPAN4-202ENST00000397396 hDV102S1A0JD36 115 aa15.67■□□□□ 0.1
TSPAN4-202ENST00000397396 PLEKHB2Q96CS7 222 aa15.67■□□□□ 0.1
TSPAN4-202ENST00000397396 IGHV3-64A0A075B6Q5 118 aa15.66■□□□□ 0.1
TSPAN4-202ENST00000397396 LEPROTO15243 131 aa15.65■□□□□ 0.1
TSPAN4-202ENST00000397396 ORAOV1Q8WV07 137 aa15.65■□□□□ 0.1
TSPAN4-202ENST00000397396 PRSS2P07478 247 aa15.64■□□□□ 0.09
TSPAN4-202ENST00000397396 Q6ZRN7 208 aaPredicted RBP15.63■□□□□ 0.09
TSPAN4-202ENST00000397396 Q8IZM0 81 aa15.63■□□□□ 0.09
TSPAN4-202ENST00000397396 PAM16Q9Y3D7 125 aa15.63■□□□□ 0.09
TSPAN4-202ENST00000397396 MAJINQ3KP22 176 aa15.62■□□□□ 0.09
TSPAN4-202ENST00000397396 SPATA45Q537H7 98 aa15.62■□□□□ 0.09
TSPAN4-202ENST00000397396 ANKRD39Q53RE8 183 aa15.62■□□□□ 0.09
TSPAN4-202ENST00000397396 SFTA2Q6UW10 78 aa15.62■□□□□ 0.09
TSPAN4-202ENST00000397396 COX7B2Q8TF08 81 aa15.62■□□□□ 0.09
TSPAN4-202ENST00000397396 LGALS3P17931 250 aaKnown RBP15.61■□□□□ 0.09
TSPAN4-202ENST00000397396 C14orf177Q52M58 125 aa15.61■□□□□ 0.09
TSPAN4-202ENST00000397396 DNAH6Q9C0G6 4158 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 J3QQQ9 107 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 CXCL5P42830 114 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 NMUP48645 174 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 SPAG11BQ08648 103 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 CDPF1Q6NVV7 123 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 TOMM7Q9P0U1 55 aa15.6■□□□□ 0.09
TSPAN4-202ENST00000397396 KMT2CQ8NEZ4 4911 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-202ENST00000397396 GVQW2A0A096LPI5 108 aaPredicted RBP15.59■□□□□ 0.09
TSPAN4-202ENST00000397396 USP17L23D6RBM5 183 aa15.59■□□□□ 0.09
TSPAN4-202ENST00000397396 ZNF561-AS1K7EIQ3 104 aa15.59■□□□□ 0.09
TSPAN4-202ENST00000397396 C15orf56Q8N910 161 aa15.59■□□□□ 0.09
TSPAN4-202ENST00000397396 C12orf57Q99622 126 aa15.59■□□□□ 0.09
TSPAN4-202ENST00000397396 F8WDY8 70 aa15.58■□□□□ 0.08
TSPAN4-202ENST00000397396 C6orf226Q5I0X4 101 aa15.58■□□□□ 0.08
TSPAN4-202ENST00000397396 MAPKAPK5-AS1Q8N8E1 139 aa15.58■□□□□ 0.08
TSPAN4-202ENST00000397396 IGKV2D-26A0A0A0MRZ7 120 aa15.55■□□□□ 0.08
TSPAN4-202ENST00000397396 CKS1BP61024 79 aa15.55■□□□□ 0.08
TSPAN4-202ENST00000397396 LINC00518Q8N0U6 118 aa15.55■□□□□ 0.08
TSPAN4-202ENST00000397396 C2orf48Q96LS8 159 aa15.55■□□□□ 0.08
TSPAN4-202ENST00000397396 MYMXA0A1B0GTQ4 84 aa15.53■□□□□ 0.08
TSPAN4-202ENST00000397396 KIAA0087Q14695 138 aa15.53■□□□□ 0.08
TSPAN4-202ENST00000397396 HIGD2BQ4VC39 106 aa15.53■□□□□ 0.08
TSPAN4-202ENST00000397396 NDUFA12Q9UI09 145 aa15.53■□□□□ 0.08
TSPAN4-202ENST00000397396 TSPEAR-AS2P59090 65 aa15.52■□□□□ 0.08
TSPAN4-202ENST00000397396 HERV-K104P63124 156 aa15.52■□□□□ 0.08
TSPAN4-202ENST00000397396 NDUFA1O15239 70 aa15.51■□□□□ 0.07
TSPAN4-202ENST00000397396 COX8AP10176 69 aa15.51■□□□□ 0.07
TSPAN4-202ENST00000397396 NTN5Q8WTR8 489 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-202ENST00000397396 KMT2AQ03164 3969 aa15.51■□□□□ 0.07
TSPAN4-202ENST00000397396 LRCOL1A6NCL2 159 aa15.5■□□□□ 0.07
TSPAN4-202ENST00000397396 ZNF815PA8K554 130 aa15.5■□□□□ 0.07
TSPAN4-202ENST00000397396 LECT2O14960 151 aa15.5■□□□□ 0.07
TSPAN4-202ENST00000397396 EREGO14944 169 aa15.49■□□□□ 0.07
TSPAN4-202ENST00000397396 CAMK2N2Q96S95 79 aa15.49■□□□□ 0.07
TSPAN4-202ENST00000397396 DLEU1O43261 78 aa15.48■□□□□ 0.07
TSPAN4-202ENST00000397396 ZNF625Q96I27 306 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-202ENST00000397396 SLC25A34Q6PIV7 304 aa15.47■□□□□ 0.07
TSPAN4-202ENST00000397396 PCP2Q8IVA1 136 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms