RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
SEC13-208ENST00000397109 MRPL35Q9NZE8 188 aaKnown RBP9.72□□□□□ -0.85
SEC13-208ENST00000397109 RYR1P21817 5038 aa9.71□□□□□ -0.86
SEC13-208ENST00000397109 CTAG1AP78358 180 aa9.71□□□□□ -0.86
SEC13-208ENST00000397109 SMAGPQ0VAQ4 97 aa9.71□□□□□ -0.86
SEC13-208ENST00000397109 COTL1Q14019 142 aa9.71□□□□□ -0.86
SEC13-208ENST00000397109 KLK12Q9UKR0 248 aa9.71□□□□□ -0.86
SEC13-208ENST00000397109 NTN5Q8WTR8 489 aaPredicted RBP9.7□□□□□ -0.86
SEC13-208ENST00000397109 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
SEC13-208ENST00000397109 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 TRBV25-1A0A075B6N4 114 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 NTM-AS1Q6ZSK4 140 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 BOD1L2Q8IYS8 172 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 CST9LQ9H4G1 147 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
SEC13-208ENST00000397109 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
SEC13-208ENST00000397109 STPG4Q8N801 248 aa9.68□□□□□ -0.86
SEC13-208ENST00000397109 FUSP35637 526 aaKnown RBP eCLIP9.67□□□□□ -0.86
SEC13-208ENST00000397109 RPL39P62891 51 aaKnown RBP9.67□□□□□ -0.86
SEC13-208ENST00000397109 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
SEC13-208ENST00000397109 Q8N814 137 aa9.67□□□□□ -0.86
SEC13-208ENST00000397109 UBE2WQ96B02 151 aa9.67□□□□□ -0.86
SEC13-208ENST00000397109 IGKV2D-24A0A075B6R9 120 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 GCSHP23434 173 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 SNHG12Q9BXW3 62 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 CSDC2Q9Y534 153 aaKnown RBP9.66□□□□□ -0.86
SEC13-208ENST00000397109 HSPG2P98160 4391 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 H7C423 109 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 CRPP02741 224 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
SEC13-208ENST00000397109 MPV17L2Q567V2 206 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 VCX2Q9H322 139 aa9.66□□□□□ -0.86
SEC13-208ENST00000397109 ANGP03950 147 aaKnown RBP9.65□□□□□ -0.87
SEC13-208ENST00000397109 FGF6P10767 208 aa9.65□□□□□ -0.87
SEC13-208ENST00000397109 AMELXQ99217 191 aa9.65□□□□□ -0.87
SEC13-208ENST00000397109 IGLV4-3A0A075B6K6 122 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 HERVK_113P61574 105 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 GAGE6Q13070 117 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 TMEM243Q9BU79 118 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 C1orf43Q9BWL3 253 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
SEC13-208ENST00000397109 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
SEC13-208ENST00000397109 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
SEC13-208ENST00000397109 E9PLD3 99 aa9.63□□□□□ -0.87
SEC13-208ENST00000397109 NMUP48645 174 aa9.63□□□□□ -0.87
SEC13-208ENST00000397109 KRTAP10-1P60331 282 aa9.63□□□□□ -0.87
SEC13-208ENST00000397109 RBX1P62877 108 aa9.63□□□□□ -0.87
SEC13-208ENST00000397109 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
SEC13-208ENST00000397109 WFDC2Q14508 124 aa9.62□□□□□ -0.87
SEC13-208ENST00000397109 MIAQ16674 131 aa9.62□□□□□ -0.87
SEC13-208ENST00000397109 LECT2O14960 151 aa9.61□□□□□ -0.87
SEC13-208ENST00000397109 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
SEC13-208ENST00000397109 Q8N1X5 172 aa9.61□□□□□ -0.87
SEC13-208ENST00000397109 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
SEC13-208ENST00000397109 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
SEC13-208ENST00000397109 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
SEC13-208ENST00000397109 PRR34Q9NV39 138 aa9.6□□□□□ -0.87
SEC13-208ENST00000397109 UBE2L6O14933 153 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 SEC11AP67812 179 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 DGAT2L7PQ6IED9 249 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 IGKV2D-26A0A0A0MRZ7 120 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 ZNF25P17030 456 aaPredicted RBP9.59□□□□□ -0.87
SEC13-208ENST00000397109 XGP55808 180 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 PCP2Q8IVA1 136 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.87
SEC13-208ENST00000397109 TINCRA0A1B0GVN0 87 aa9.58□□□□□ -0.88
SEC13-208ENST00000397109 HSD52Q0P140 79 aa9.58□□□□□ -0.88
SEC13-208ENST00000397109 TAL2Q16559 108 aa9.58□□□□□ -0.88
SEC13-208ENST00000397109 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
SEC13-208ENST00000397109 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.57□□□□□ -0.88
SEC13-208ENST00000397109 CHAC1Q9BUX1 264 aa9.57□□□□□ -0.88
SEC13-208ENST00000397109 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
SEC13-208ENST00000397109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
SEC13-208ENST00000397109 TRAV8-4A0A0B4J246 113 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 MYMXA0A1B0GTQ4 84 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
SEC13-208ENST00000397109 HINT1P49773 126 aaPredicted RBP9.56□□□□□ -0.88
SEC13-208ENST00000397109 REG3AQ06141 175 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 BVES-AS1Q5T3Y7 98 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 OPRPNQ99935 248 aaPredicted RBP9.56□□□□□ -0.88
SEC13-208ENST00000397109 KRTAP17-1Q9BYP8 105 aa9.56□□□□□ -0.88
SEC13-208ENST00000397109 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
SEC13-208ENST00000397109 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
SEC13-208ENST00000397109 BATFQ16520 125 aa9.54□□□□□ -0.88
SEC13-208ENST00000397109 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
SEC13-208ENST00000397109 PCLOQ9Y6V0 5065 aa9.54□□□□□ -0.88
SEC13-208ENST00000397109 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
SEC13-208ENST00000397109 LEPROTO15243 131 aa9.53□□□□□ -0.88
SEC13-208ENST00000397109 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 466 ms