RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 COX6A2Q02221 97 aa12.64□□□□□ -0.39
MCF2L-208ENST00000397030 KIAA1549LQ6ZVL6 1849 aa12.64□□□□□ -0.39
MCF2L-208ENST00000397030 COA6Q5JTJ3 125 aaKnown RBP12.64□□□□□ -0.39
MCF2L-208ENST00000397030 NUP210LQ5VU65 1888 aa12.64□□□□□ -0.39
MCF2L-208ENST00000397030 FSTL3O95633 263 aa12.64□□□□□ -0.39
MCF2L-208ENST00000397030 A0A0U1RQV1 116 aa12.63□□□□□ -0.39
MCF2L-208ENST00000397030 A0A1B0GXF2 115 aa12.63□□□□□ -0.39
MCF2L-208ENST00000397030 MAPKAPK5-AS1Q8N8E1 139 aa12.63□□□□□ -0.39
MCF2L-208ENST00000397030 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
MCF2L-208ENST00000397030 TP73-AS1Q9UF72 201 aa12.63□□□□□ -0.39
MCF2L-208ENST00000397030 A6NED7 52 aa12.62□□□□□ -0.39
MCF2L-208ENST00000397030 Q8N6K4 173 aa12.62□□□□□ -0.39
MCF2L-208ENST00000397030 C2orf48Q96LS8 159 aa12.61□□□□□ -0.39
MCF2L-208ENST00000397030 ODF3L2Q3SX64 289 aa12.61□□□□□ -0.39
MCF2L-208ENST00000397030 P0C879 139 aa12.61□□□□□ -0.39
MCF2L-208ENST00000397030 DEFB116Q30KQ4 102 aa12.61□□□□□ -0.39
MCF2L-208ENST00000397030 KIAA1549Q9HCM3 1950 aa12.61□□□□□ -0.39
MCF2L-208ENST00000397030 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-208ENST00000397030 COX17Q14061 63 aa12.6□□□□□ -0.39
MCF2L-208ENST00000397030 Q9BRP9 147 aa12.6□□□□□ -0.39
MCF2L-208ENST00000397030 Q6ZPA2 131 aa12.6□□□□□ -0.39
MCF2L-208ENST00000397030 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
MCF2L-208ENST00000397030 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
MCF2L-208ENST00000397030 PRR3P79522 188 aaKnown RBP12.59□□□□□ -0.39
MCF2L-208ENST00000397030 MDFIQ99750 246 aa12.59□□□□□ -0.39
MCF2L-208ENST00000397030 ALPK3Q96L96 1907 aa12.59□□□□□ -0.39
MCF2L-208ENST00000397030 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-208ENST00000397030 SRCAPQ6ZRS2 3230 aa12.58□□□□□ -0.4
MCF2L-208ENST00000397030 IGLV1-51P01701 117 aa12.58□□□□□ -0.4
MCF2L-208ENST00000397030 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
MCF2L-208ENST00000397030 Q8IZM0 81 aa12.58□□□□□ -0.4
MCF2L-208ENST00000397030 CDC42SE2Q9NRR3 84 aa12.57□□□□□ -0.4
MCF2L-208ENST00000397030 TRBV27A0A0K0K1C4 114 aa12.57□□□□□ -0.4
MCF2L-208ENST00000397030 FAM19A3Q7Z5A8 133 aa12.57□□□□□ -0.4
MCF2L-208ENST00000397030 MRPL55Q7Z7F7 128 aaKnown RBP12.57□□□□□ -0.4
MCF2L-208ENST00000397030 TRBV30A0A0K0K1B3 111 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 TRBV10-3A0A0K0K1G6 114 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 PYGO1Q9Y3Y4 419 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 KLLNB2CW77 178 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 MED12LQ86YW9 2145 aa12.56□□□□□ -0.4
MCF2L-208ENST00000397030 NDUFC2-KCTD14E9PQ53 114 aa12.55□□□□□ -0.4
MCF2L-208ENST00000397030 J3QL48 77 aa12.55□□□□□ -0.4
MCF2L-208ENST00000397030 PCOTHQ58A44 107 aa12.55□□□□□ -0.4
MCF2L-208ENST00000397030 EIF4EBP1Q13541 118 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-208ENST00000397030 IGLV4-60A0A075B6I1 120 aa12.54□□□□□ -0.4
MCF2L-208ENST00000397030 ATP5EP2Q5VTU8 51 aa12.54□□□□□ -0.4
MCF2L-208ENST00000397030 C11orf1Q9H5F2 150 aa12.54□□□□□ -0.4
MCF2L-208ENST00000397030 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
MCF2L-208ENST00000397030 MT-ATP8P03928 68 aa12.53□□□□□ -0.4
MCF2L-208ENST00000397030 FHL2Q14192 279 aa12.52□□□□□ -0.4
MCF2L-208ENST00000397030 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-208ENST00000397030 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.41
MCF2L-208ENST00000397030 EGFEM1PQ0D2K5 195 aa12.52□□□□□ -0.41
MCF2L-208ENST00000397030 FHL3Q13643 280 aa12.52□□□□□ -0.41
MCF2L-208ENST00000397030 RAI1Q7Z5J4 1906 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-208ENST00000397030 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
MCF2L-208ENST00000397030 PRLHP81277 87 aa12.52□□□□□ -0.41
MCF2L-208ENST00000397030 NRACQ8N912 160 aa12.52□□□□□ -0.41
MCF2L-208ENST00000397030 SPACA4Q8TDM5 124 aa12.52□□□□□ -0.41
MCF2L-208ENST00000397030 TRBV7-6A0A0J9YX20 115 aa12.51□□□□□ -0.41
MCF2L-208ENST00000397030 GAS8-AS1O95177 125 aa12.51□□□□□ -0.41
MCF2L-208ENST00000397030 MRPS36P82909 103 aaKnown RBP12.51□□□□□ -0.41
MCF2L-208ENST00000397030 FAM240AA0A1B0GVK7 77 aa12.51□□□□□ -0.41
MCF2L-208ENST00000397030 LYPD5Q6UWN5 251 aa12.51□□□□□ -0.41
MCF2L-208ENST00000397030 PTPN13Q12923 2485 aa12.5□□□□□ -0.41
MCF2L-208ENST00000397030 WNK1Q9H4A3 2382 aa12.5□□□□□ -0.41
MCF2L-208ENST00000397030 ZNF295-AS1Q8N0V1 137 aa12.5□□□□□ -0.41
MCF2L-208ENST00000397030 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
MCF2L-208ENST00000397030 PLA2G1BP04054 148 aaKnown RBP12.49□□□□□ -0.41
MCF2L-208ENST00000397030 FREM1Q5H8C1 2179 aa12.48□□□□□ -0.41
MCF2L-208ENST00000397030 COL5A1P20908 1838 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-208ENST00000397030 LINC00208Q96KT6 92 aa12.48□□□□□ -0.41
MCF2L-208ENST00000397030 EXPH5Q8NEV8 1989 aa12.48□□□□□ -0.41
MCF2L-208ENST00000397030 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
MCF2L-208ENST00000397030 C16orf90A8MZG2 172 aa12.47□□□□□ -0.41
MCF2L-208ENST00000397030 LINC01547P58512 204 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-208ENST00000397030 IGKV2D-30A0A075B6S6 120 aa12.46□□□□□ -0.42
MCF2L-208ENST00000397030 IGKV2-30P06310 120 aa12.46□□□□□ -0.42
MCF2L-208ENST00000397030 TIMM17BO60830 172 aa12.45□□□□□ -0.42
MCF2L-208ENST00000397030 V9GYY9 64 aa12.45□□□□□ -0.42
MCF2L-208ENST00000397030 PRR14LQ5THK1 2151 aa12.44□□□□□ -0.42
MCF2L-208ENST00000397030 PCDH15Q96QU1 1955 aa12.44□□□□□ -0.42
MCF2L-208ENST00000397030 A0A087WSZ3 146 aa12.43□□□□□ -0.42
MCF2L-208ENST00000397030 CRIP3Q6Q6R5 217 aa12.43□□□□□ -0.42
MCF2L-208ENST00000397030 UQCRQO14949 82 aa12.43□□□□□ -0.42
MCF2L-208ENST00000397030 A0A1W2PPR1 153 aa12.43□□□□□ -0.42
MCF2L-208ENST00000397030 LINC00242Q5T6M2 205 aa12.42□□□□□ -0.42
MCF2L-208ENST00000397030 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
MCF2L-208ENST00000397030 CHCHD7Q9BUK0 85 aa12.4□□□□□ -0.42
MCF2L-208ENST00000397030 Q6ZRU5 148 aa12.4□□□□□ -0.42
MCF2L-208ENST00000397030 NOTCH2Q04721 2471 aa12.4□□□□□ -0.42
MCF2L-208ENST00000397030 A0A087WYN8 130 aa12.4□□□□□ -0.42
MCF2L-208ENST00000397030 SORL1Q92673 2214 aa12.4□□□□□ -0.42
MCF2L-208ENST00000397030 C7orf65Q6ZTY9 151 aa12.4□□□□□ -0.43
MCF2L-208ENST00000397030 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
MCF2L-208ENST00000397030 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
MCF2L-208ENST00000397030 Q8N814 137 aa12.39□□□□□ -0.43
MCF2L-208ENST00000397030 NTM-AS1Q6ZSK4 140 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms