RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ZFHX2Q9C0A1 2572 aaPredicted RBP10.33□□□□□ -0.76
COL4A3-202ENST00000396578 RPL37AP8A6NKH3 93 aa10.33□□□□□ -0.76
COL4A3-202ENST00000396578 ZNF73O43830 326 aaPredicted RBP10.33□□□□□ -0.76
COL4A3-202ENST00000396578 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
COL4A3-202ENST00000396578 BRWD1-AS2P59051 145 aa10.33□□□□□ -0.76
COL4A3-202ENST00000396578 M0QXV9 152 aa10.33□□□□□ -0.76
COL4A3-202ENST00000396578 LOC107984640A0A0U1RRK4 108 aa10.32□□□□□ -0.76
COL4A3-202ENST00000396578 IGLV2-11P01706 119 aa10.32□□□□□ -0.76
COL4A3-202ENST00000396578 BDP1A6H8Y1 2624 aa10.32□□□□□ -0.76
COL4A3-202ENST00000396578 MYO18BQ8IUG5 2567 aa10.32□□□□□ -0.76
COL4A3-202ENST00000396578 Q6ZS46 218 aa10.32□□□□□ -0.76
COL4A3-202ENST00000396578 LMO4P61968 165 aa10.31□□□□□ -0.76
COL4A3-202ENST00000396578 BBC3Q96PG8 261 aaPredicted RBP10.31□□□□□ -0.76
COL4A3-202ENST00000396578 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
COL4A3-202ENST00000396578 UBE2D2P62837 147 aa10.3□□□□□ -0.76
COL4A3-202ENST00000396578 LELP1Q5T871 98 aa10.3□□□□□ -0.76
COL4A3-202ENST00000396578 LINC00474Q9P2X8 69 aa10.3□□□□□ -0.76
COL4A3-202ENST00000396578 PRYO14603 147 aa10.3□□□□□ -0.76
COL4A3-202ENST00000396578 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
COL4A3-202ENST00000396578 CELA1Q9UNI1 258 aa10.3□□□□□ -0.76
COL4A3-202ENST00000396578 POM121L12Q8N7R1 296 aa10.29□□□□□ -0.76
COL4A3-202ENST00000396578 TRAV10A0A0B4J240 114 aa10.29□□□□□ -0.76
COL4A3-202ENST00000396578 Q8IZM0 81 aa10.29□□□□□ -0.76
COL4A3-202ENST00000396578 FSTL3O95633 263 aa10.29□□□□□ -0.76
COL4A3-202ENST00000396578 ESRGQ1W209 222 aa10.29□□□□□ -0.76
COL4A3-202ENST00000396578 TRBV7-6A0A0J9YX20 115 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 Q6ZPA2 131 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 NTM-AS1Q6ZSK4 140 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 PLAC8L1A1L4L8 177 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 KPRPQ5T749 579 aaPredicted RBP10.28□□□□□ -0.76
COL4A3-202ENST00000396578 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
COL4A3-202ENST00000396578 C1orf229Q6ZS94 237 aaPredicted RBP10.27□□□□□ -0.76
COL4A3-202ENST00000396578 HIVEP3Q5T1R4 2406 aa10.27□□□□□ -0.77
COL4A3-202ENST00000396578 CACNA1AO00555 2505 aa10.27□□□□□ -0.77
COL4A3-202ENST00000396578 DOPEY1Q5JWR5 2465 aa10.27□□□□□ -0.77
COL4A3-202ENST00000396578 Q8N814 137 aa10.26□□□□□ -0.77
COL4A3-202ENST00000396578 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
COL4A3-202ENST00000396578 LINC00208Q96KT6 92 aa10.26□□□□□ -0.77
COL4A3-202ENST00000396578 COL4A4P53420 1690 aaPredicted RBP10.26□□□□□ -0.77
COL4A3-202ENST00000396578 LOC100131303A0A0U1RQF7 123 aa10.25□□□□□ -0.77
COL4A3-202ENST00000396578 KLLNB2CW77 178 aa10.25□□□□□ -0.77
COL4A3-202ENST00000396578 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
COL4A3-202ENST00000396578 Q8NA96 180 aa10.24□□□□□ -0.77
COL4A3-202ENST00000396578 CDC42SE2Q9NRR3 84 aa10.23□□□□□ -0.77
COL4A3-202ENST00000396578 IGLV2-18A0A075B6J9 118 aa10.23□□□□□ -0.77
COL4A3-202ENST00000396578 PSPHP1O15172 72 aa10.23□□□□□ -0.77
COL4A3-202ENST00000396578 CNFNQ9BYD5 112 aa10.22□□□□□ -0.77
COL4A3-202ENST00000396578 C1orf137Q5JT78 98 aa10.22□□□□□ -0.77
COL4A3-202ENST00000396578 PRR9Q5T870 116 aa10.22□□□□□ -0.77
COL4A3-202ENST00000396578 CCDC168Q8NDH2 2452 aa10.21□□□□□ -0.78
COL4A3-202ENST00000396578 CYSRT1A8MQ03 144 aa10.21□□□□□ -0.78
COL4A3-202ENST00000396578 RPL28P46779 137 aaKnown RBP10.21□□□□□ -0.78
COL4A3-202ENST00000396578 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.78
COL4A3-202ENST00000396578 A0A1W2PNU3 283 aaPredicted RBP10.2□□□□□ -0.78
COL4A3-202ENST00000396578 PSMG3-AS1Q96PY0 264 aa10.2□□□□□ -0.78
COL4A3-202ENST00000396578 REG3GQ6UW15 175 aa10.2□□□□□ -0.78
COL4A3-202ENST00000396578 IGIPA6NJ69 53 aa10.2□□□□□ -0.78
COL4A3-202ENST00000396578 MRGPRG-AS1Q2M3A8 158 aa10.2□□□□□ -0.78
COL4A3-202ENST00000396578 NANOS2P60321 138 aaKnown RBP10.2□□□□□ -0.78
COL4A3-202ENST00000396578 TRBV7-7A0A0K0K1E9 115 aa10.19□□□□□ -0.78
COL4A3-202ENST00000396578 Q6ZSV7 163 aa10.19□□□□□ -0.78
COL4A3-202ENST00000396578 CRIP3Q6Q6R5 217 aa10.19□□□□□ -0.78
COL4A3-202ENST00000396578 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
COL4A3-202ENST00000396578 RETNQ9HD89 108 aa10.19□□□□□ -0.78
COL4A3-202ENST00000396578 M0R2N4 97 aa10.18□□□□□ -0.78
COL4A3-202ENST00000396578 A0A087WYN8 130 aa10.18□□□□□ -0.78
COL4A3-202ENST00000396578 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
COL4A3-202ENST00000396578 ZNF843Q8N446 348 aa10.18□□□□□ -0.78
COL4A3-202ENST00000396578 Q8N3U1 123 aa10.18□□□□□ -0.78
COL4A3-202ENST00000396578 INAFM1C9JVW0 142 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 WDR87Q6ZQQ6 2873 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 C10orf99Q6UWK7 81 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 H0Y9P7 68 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 IGHV6-1A0A0B4J1U7 121 aa10.17□□□□□ -0.78
COL4A3-202ENST00000396578 A0A087WVE0 104 aa10.16□□□□□ -0.78
COL4A3-202ENST00000396578 WISP2O76076 250 aa10.16□□□□□ -0.78
COL4A3-202ENST00000396578 NOTCH2Q04721 2471 aa10.16□□□□□ -0.78
COL4A3-202ENST00000396578 X6R8D5 127 aa10.16□□□□□ -0.78
COL4A3-202ENST00000396578 TRBV10-3A0A0K0K1G6 114 aa10.15□□□□□ -0.78
COL4A3-202ENST00000396578 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
COL4A3-202ENST00000396578 PRM2P04554 102 aa10.15□□□□□ -0.78
COL4A3-202ENST00000396578 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.79
COL4A3-202ENST00000396578 LINC00575Q6W349 94 aa10.15□□□□□ -0.79
COL4A3-202ENST00000396578 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
COL4A3-202ENST00000396578 EGFEM1PQ0D2K5 195 aa10.14□□□□□ -0.79
COL4A3-202ENST00000396578 C19orf84I3L1E1 186 aa10.14□□□□□ -0.79
COL4A3-202ENST00000396578 BEAN1Q3B7T3 259 aa10.14□□□□□ -0.79
COL4A3-202ENST00000396578 SMIM1B2RUZ4 78 aa10.13□□□□□ -0.79
COL4A3-202ENST00000396578 COX6A2Q02221 97 aa10.13□□□□□ -0.79
COL4A3-202ENST00000396578 UNQ6190/PRO20217Q6UXQ8 127 aa10.13□□□□□ -0.79
COL4A3-202ENST00000396578 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
COL4A3-202ENST00000396578 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
COL4A3-202ENST00000396578 C11orf71Q6IPW1 123 aa10.12□□□□□ -0.79
COL4A3-202ENST00000396578 PRORYQ9H606 182 aa10.12□□□□□ -0.79
COL4A3-202ENST00000396578 CRYGAP11844 174 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms