RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 LINC01556Q5JQF7 62 aa2.35□□□□□ -2.03
CDKN3-203ENST00000395577 LPCAT3Q6P1A2 487 aa2.35□□□□□ -2.03
CDKN3-203ENST00000395577 ZNF431Q8TF32 576 aaPredicted RBP2.35□□□□□ -2.03
CDKN3-203ENST00000395577 ODF3Q96PU9 254 aa2.35□□□□□ -2.03
CDKN3-203ENST00000395577 WDR61Q9GZS3 305 aaKnown RBP2.35□□□□□ -2.03
CDKN3-203ENST00000395577 CCDC90BQ9GZT6 254 aa2.35□□□□□ -2.03
CDKN3-203ENST00000395577 CRYM-AS1A6NIL9 109 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 H7C2G1 150 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 CD3DP04234 171 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 IGLC2P0DOY2 106 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 ASIPP42127 132 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 HIST1H1AQ02539 215 aaPredicted RBP2.34□□□□□ -2.03
CDKN3-203ENST00000395577 CIRBPQ14011 172 aaKnown RBP2.34□□□□□ -2.03
CDKN3-203ENST00000395577 OR8I2Q8N0Y5 310 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 PBDC1Q9BVG4 233 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 IL36BQ9NZH7 164 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 LY96Q9Y6Y9 160 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 U3KQ87 197 aa2.34□□□□□ -2.03
CDKN3-203ENST00000395577 SNRPGP15A8MWD9 76 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 H3BQ15 152 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 PPBPP02775 128 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H4AP62805 103 aaKnown RBP2.33□□□□□ -2.04
CDKN3-203ENST00000395577 IBA57Q5T440 356 aaKnown RBP2.33□□□□□ -2.04
CDKN3-203ENST00000395577 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 ANKRD29Q8N6D5 301 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 TERB2Q8NHR7 220 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
CDKN3-203ENST00000395577 VCX3BQ9H321 246 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 NAA60Q9H7X0 242 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 PRO0255Q9UI72 69 aa2.33□□□□□ -2.04
CDKN3-203ENST00000395577 CEBPZOSA8MTT3 80 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 CFDP00746 253 aaPredicted RBP2.32□□□□□ -2.04
CDKN3-203ENST00000395577 SULT1A3P0DMM9 295 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 SULT1A4P0DMN0 295 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 CCL20P78556 96 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 SLC38A11Q08AI6 406 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 SURF2Q15527 256 aaPredicted RBP2.32□□□□□ -2.04
CDKN3-203ENST00000395577 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 S100A16Q96FQ6 103 aaKnown RBP2.32□□□□□ -2.04
CDKN3-203ENST00000395577 MIXL1Q9H2W2 232 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 SSR3Q9UNL2 185 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
CDKN3-203ENST00000395577 TRGV1A0A0A0MS02 117 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 TRAV12-3A0A0B4J271 114 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 C7orf71A4D174 169 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 M0R3E3 92 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 ATG12O94817 140 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 SFTA3P0C7M3 94 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 SLC25A6P12236 298 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 RPL7P18124 248 aaKnown RBP2.31□□□□□ -2.04
CDKN3-203ENST00000395577 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 ZNF846Q147U1 533 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 SMCO1Q147U7 214 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 RNASE10Q5GAN6 216 aaKnown RBP2.31□□□□□ -2.04
CDKN3-203ENST00000395577 KRTAP26-1Q6PEX3 210 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 LCN15Q6UWW0 184 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 SNX29P2Q8IUI4 249 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 TMEM229BQ8NBD8 167 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 LINC01600Q96MT4 127 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 PDCD10Q9BUL8 212 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 AGPAT4-IT1Q9H0P7 198 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 ENY2Q9NPA8 101 aa2.31□□□□□ -2.04
CDKN3-203ENST00000395577 HMSDA8MTL9 139 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 SLC25A5P05141 298 aaKnown RBP2.3□□□□□ -2.04
CDKN3-203ENST00000395577 NMBP08949 121 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 HTN1P15515 57 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 EVI2AP22794 236 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 S100GP29377 79 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 RPS20P60866 119 aaKnown RBP2.3□□□□□ -2.04
CDKN3-203ENST00000395577 RPL37AP61513 92 aaKnown RBP2.3□□□□□ -2.04
CDKN3-203ENST00000395577 TDRG1Q3Y452 100 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 PCOTHQ58A44 107 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 TMEM14EPQ6UXP3 125 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 IZUMO2Q6UXV1 221 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 DPPA3Q6W0C5 159 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 CYP2G1PQ6ZSU1 146 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 SMIM4Q8WVI0 70 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 SLC50A1Q9BRV3 221 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 COPZ2Q9P299 210 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 CACFD1Q9UGQ2 172 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 HIGD1AQ9Y241 93 aa2.3□□□□□ -2.04
CDKN3-203ENST00000395577 TRBV19A0A075B6N1 114 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 TRGV2A0A075B6R0 118 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 TRAV4A0A0B4J268 109 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 DUXBA0A1W2PPF3 345 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HYPMO75409 117 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 FABP1P07148 127 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 OR4E1P0C645 316 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 IAPPP10997 89 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 DEFA1P59665 94 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 NCS1P62166 190 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 RHOBP62745 196 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 SSBP1Q04837 148 aaKnown RBP2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms