RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 DEFB113Q30KQ7 82 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 NDUFA11Q86Y39 141 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.87□□□□□ -1.95
HERC4-204ENST00000395198 F8P00451 2351 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 hDV103S1A0JD37 113 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 LEPROTL1O95214 131 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 IGKV3-20P01619 116 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 IGLV1-40P01703 118 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 C9orf116Q5BN46 136 aaPredicted RBP2.87□□□□□ -1.95
HERC4-204ENST00000395198 LYZL1Q6UWQ5 148 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 TIMM21Q9BVV7 248 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 KLK15Q9H2R5 256 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 IGHV4-30-2A0A087WSY4 118 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 A0A087X002 238 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 A0A0B4J2C4 111 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 TMEM14DPA8MWL7 114 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 IGHV3-23P01764 117 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 FAM53AQ6NSI3 398 aaPredicted RBP2.87□□□□□ -1.95
HERC4-204ENST00000395198 RMI2Q96E14 147 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 C5orf42Q9H799 3197 aa2.87□□□□□ -1.95
HERC4-204ENST00000395198 COL4A3Q01955 1670 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 A0A1B0GW54 56 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 Q6YL49 198 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 LYPD6Q86Y78 171 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 A6NED7 52 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 LECT2O14960 151 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 TNRC18O15417 2968 aaPredicted RBP2.86□□□□□ -1.95
HERC4-204ENST00000395198 C10orf113Q5VZT2 155 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 CDC42SE1Q9NRR8 79 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 IGHV4-4A0A075B6R2 117 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 LINC01549A6NIU2 74 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 HTN3P15516 51 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 DAZAP2Q15038 168 aaPredicted RBP2.86□□□□□ -1.95
HERC4-204ENST00000395198 LAMA5O15230 3695 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 A0A087WVE0 104 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 SPANXN1Q5VSR9 72 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 LINC01006Q8NI28 216 aa2.86□□□□□ -1.95
HERC4-204ENST00000395198 TMEM223A0PJW6 202 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 IGLV2-11P01706 119 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 IGHV1-8P0DP01 117 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 IFI27L1Q96BM0 104 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 AKAP9Q99996 3911 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 IGHV4OR15-8A0A075B7B6 117 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 IGHV3-66A0A0C4DH42 116 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 C10orf25Q5T742 122 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 KLHL30-AS1Q8NEE0 82 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 MAST4O15021 2626 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 IGLV4-3A0A075B6K6 122 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 SAA2P0DJI9 122 aaPredicted RBP2.85□□□□□ -1.95
HERC4-204ENST00000395198 PROK1P58294 105 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 MINOS1Q5TGZ0 78 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 ZNF818PQ6ZRF7 136 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 CIRBP-AS1Q8TBR5 109 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 MINOS1-NBL1R4GNA1 71 aa2.85□□□□□ -1.95
HERC4-204ENST00000395198 C17orf98A8MV24 154 aa2.84□□□□□ -1.95
HERC4-204ENST00000395198 M0R1W7 72 aa2.84□□□□□ -1.95
HERC4-204ENST00000395198 BCE1O60756 84 aa2.84□□□□□ -1.95
HERC4-204ENST00000395198 TMEM167BQ9NRX6 74 aa2.84□□□□□ -1.95
HERC4-204ENST00000395198 A0A087WW49 117 aa2.84□□□□□ -1.95
HERC4-204ENST00000395198 IGLV2-14P01704 120 aa2.84□□□□□ -1.95
HERC4-204ENST00000395198 Q6JHZ5 121 aa2.84□□□□□ -1.96
HERC4-204ENST00000395198 IGHV1-69P01742 117 aa2.84□□□□□ -1.96
HERC4-204ENST00000395198 GAFA1Q96PS6 74 aa2.84□□□□□ -1.96
HERC4-204ENST00000395198 PRO1854Q9UHT4 67 aa2.84□□□□□ -1.96
HERC4-204ENST00000395198 TRAV7A0A075B6U4 112 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 PRAC2D3DTV9 90 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 TLX1NBP0CAT3 122 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 FAM167A-AS1Q96KT0 104 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 XAGE1AQ9HD64 81 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 U3KQK5 164 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 IGLV8-61A0A075B6I0 122 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 IGHV1-3A0A0C4DH29 117 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 H7C423 109 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 SPINK4O60575 86 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 IGLV1-44P01699 117 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 CRPP02741 224 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 EIF4EBP1Q13541 118 aaPredicted RBP2.83□□□□□ -1.96
HERC4-204ENST00000395198 C10orf55Q5SWW7 151 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 SNURFQ9Y675 71 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 IGHV7-4-1A0A0J9YVY3 117 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 MGPP08493 103 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 PLA2G2AP14555 144 aa2.83□□□□□ -1.96
HERC4-204ENST00000395198 IFI27P40305 119 aaPredicted RBP2.83□□□□□ -1.96
HERC4-204ENST00000395198 FXYD7P58549 80 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 C15orf56Q8N910 161 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 TMEM14BQ9NUH8 114 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 PSMG4Q5JS54 123 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 CYP4F30PQ9H0H9 118 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 CFAP47Q6ZTR5 3102 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 MIAQ16674 131 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 DYNAPQ8N1N2 210 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 ZNF469Q96JG9 3925 aaPredicted RBP2.82□□□□□ -1.96
HERC4-204ENST00000395198 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
HERC4-204ENST00000395198 Q6ZQT0 140 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 NTM-AS1Q6ZSK4 140 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms