RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 NBASA2RRP1 2371 aa8.98□□□□□ -0.97
SIN3A-202ENST00000394947 NDUFC1O43677 76 aa8.98□□□□□ -0.97
SIN3A-202ENST00000394947 ATP5EP56381 51 aaPredicted RBP8.97□□□□□ -0.97
SIN3A-202ENST00000394947 IGFL2Q6UWQ7 119 aa8.97□□□□□ -0.97
SIN3A-202ENST00000394947 UNQ6190/PRO20217Q6UXQ8 127 aa8.97□□□□□ -0.97
SIN3A-202ENST00000394947 Q8NA96 180 aa8.97□□□□□ -0.97
SIN3A-202ENST00000394947 LMO4P61968 165 aa8.97□□□□□ -0.97
SIN3A-202ENST00000394947 NUP210LQ5VU65 1888 aa8.97□□□□□ -0.97
SIN3A-202ENST00000394947 NUP210Q8TEM1 1887 aaPredicted RBP8.97□□□□□ -0.97
SIN3A-202ENST00000394947 A8MTW9 85 aa8.97□□□□□ -0.97
SIN3A-202ENST00000394947 COX6A2Q02221 97 aa8.96□□□□□ -0.97
SIN3A-202ENST00000394947 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
SIN3A-202ENST00000394947 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
SIN3A-202ENST00000394947 ODF3BA8MYP8 253 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 Q6ZSR3 168 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 PLXNB1O43157 2135 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 TRBV6-4A0A1B0GX49 114 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 IGLV8-61A0A075B6I0 122 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 IGKV2D-30A0A075B6S6 120 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
SIN3A-202ENST00000394947 H0Y9P7 68 aa8.94□□□□□ -0.98
SIN3A-202ENST00000394947 PRR14LQ5THK1 2151 aa8.94□□□□□ -0.98
SIN3A-202ENST00000394947 LST1O00453 97 aa8.94□□□□□ -0.98
SIN3A-202ENST00000394947 DSCAMO60469 2012 aa8.94□□□□□ -0.98
SIN3A-202ENST00000394947 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
SIN3A-202ENST00000394947 LELP1Q5T871 98 aa8.93□□□□□ -0.98
SIN3A-202ENST00000394947 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
SIN3A-202ENST00000394947 KIAA1549LQ6ZVL6 1849 aa8.93□□□□□ -0.98
SIN3A-202ENST00000394947 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
SIN3A-202ENST00000394947 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
SIN3A-202ENST00000394947 Q9BRP9 147 aa8.93□□□□□ -0.98
SIN3A-202ENST00000394947 BRWD1-AS2P59051 145 aa8.92□□□□□ -0.98
SIN3A-202ENST00000394947 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 NRACQ8N912 160 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 ZNF702PQ9H963 129 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 ATG2AQ2TAZ0 1938 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 COL4A3Q01955 1670 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 C2orf91Q6ZV80 131 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 ODF3Q96PU9 254 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 TRBV7-7A0A0K0K1E9 115 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 HCG22E2RYF7 251 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 SORL1Q92673 2214 aa8.91□□□□□ -0.98
SIN3A-202ENST00000394947 TANC1Q9C0D5 1861 aa8.9□□□□□ -0.98
SIN3A-202ENST00000394947 PRRC2AP48634 2157 aaKnown RBP8.9□□□□□ -0.98
SIN3A-202ENST00000394947 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.98
SIN3A-202ENST00000394947 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.98
SIN3A-202ENST00000394947 Q6ZPA2 131 aa8.89□□□□□ -0.99
SIN3A-202ENST00000394947 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
SIN3A-202ENST00000394947 ZNF580Q9UK33 172 aa8.89□□□□□ -0.99
SIN3A-202ENST00000394947 A0A087WSZ3 146 aa8.89□□□□□ -0.99
SIN3A-202ENST00000394947 Q8N814 137 aa8.89□□□□□ -0.99
SIN3A-202ENST00000394947 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
SIN3A-202ENST00000394947 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
SIN3A-202ENST00000394947 C11orf1Q9H5F2 150 aa8.88□□□□□ -0.99
SIN3A-202ENST00000394947 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
SIN3A-202ENST00000394947 EML5Q05BV3 1969 aa8.87□□□□□ -0.99
SIN3A-202ENST00000394947 IGLV4-60A0A075B6I1 120 aa8.87□□□□□ -0.99
SIN3A-202ENST00000394947 PRORYQ9H606 182 aa8.87□□□□□ -0.99
SIN3A-202ENST00000394947 U3KQK5 164 aa8.87□□□□□ -0.99
SIN3A-202ENST00000394947 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.87□□□□□ -0.99
SIN3A-202ENST00000394947 PCNX3Q9H6A9 2034 aa8.87□□□□□ -0.99
SIN3A-202ENST00000394947 RAI1Q7Z5J4 1906 aaPredicted RBP8.87□□□□□ -0.99
SIN3A-202ENST00000394947 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 LINC00474Q9P2X8 69 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 Q6JHZ5 121 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 ZNF295-AS1Q8N0V1 137 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 Q8N3U1 123 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
SIN3A-202ENST00000394947 TET2Q6N021 2002 aaPredicted RBP8.85□□□□□ -0.99
SIN3A-202ENST00000394947 CACNA1HO95180 2353 aa8.85□□□□□ -0.99
SIN3A-202ENST00000394947 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
SIN3A-202ENST00000394947 Q6ZTC4 211 aa8.84□□□□□ -0.99
SIN3A-202ENST00000394947 COX17Q14061 63 aa8.84□□□□□ -0.99
SIN3A-202ENST00000394947 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
SIN3A-202ENST00000394947 MRGPRG-AS1Q2M3A8 158 aa8.83□□□□□ -1
SIN3A-202ENST00000394947 ALPK3Q96L96 1907 aa8.83□□□□□ -1
SIN3A-202ENST00000394947 Q8IZM0 81 aa8.83□□□□□ -1
SIN3A-202ENST00000394947 TSPEAR-AS2P59090 65 aa8.82□□□□□ -1
SIN3A-202ENST00000394947 LINC00337Q8N6G1 96 aa8.82□□□□□ -1
SIN3A-202ENST00000394947 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
SIN3A-202ENST00000394947 P0C879 139 aa8.81□□□□□ -1
SIN3A-202ENST00000394947 RIF1Q5UIP0 2472 aaKnown RBP8.81□□□□□ -1
SIN3A-202ENST00000394947 IMUPQ9GZP8 106 aa8.81□□□□□ -1
SIN3A-202ENST00000394947 FSTL3O95633 263 aa8.8□□□□□ -1
SIN3A-202ENST00000394947 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
SIN3A-202ENST00000394947 FSHBP01225 129 aa8.8□□□□□ -1
SIN3A-202ENST00000394947 LINC00242Q5T6M2 205 aa8.79□□□□□ -1
SIN3A-202ENST00000394947 A0A1B0GU69 56 aa8.79□□□□□ -1
SIN3A-202ENST00000394947 SMIM29Q86T20 159 aa8.79□□□□□ -1
SIN3A-202ENST00000394947 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
SIN3A-202ENST00000394947 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
SIN3A-202ENST00000394947 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
SIN3A-202ENST00000394947 Q6ZSN1 163 aa8.77□□□□□ -1.01
SIN3A-202ENST00000394947 AGRNO00468 2067 aa8.77□□□□□ -1.01
SIN3A-202ENST00000394947 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
SIN3A-202ENST00000394947 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
SIN3A-202ENST00000394947 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
SIN3A-202ENST00000394947 EIF4EBP1Q13541 118 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms