RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
CCT4-201ENST00000394440 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
CCT4-201ENST00000394440 IGLV5-39A0A0G2JS06 123 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 K7EP13 123 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 Q6ZTC4 211 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 Q6ZVH6 145 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 TM2D3Q9BRN9 247 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 H3BNG1 76 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
CCT4-201ENST00000394440 MEGF8Q7Z7M0 2845 aa10.31□□□□□ -0.76
CCT4-201ENST00000394440 A6NDN8 102 aa10.31□□□□□ -0.76
CCT4-201ENST00000394440 HIST1H4GQ99525 98 aa10.31□□□□□ -0.76
CCT4-201ENST00000394440 SPANXB1Q9NS25 103 aaPredicted RBP10.31□□□□□ -0.76
CCT4-201ENST00000394440 COX11Q9Y6N1 276 aa10.31□□□□□ -0.76
CCT4-201ENST00000394440 SMIM1B2RUZ4 78 aa10.31□□□□□ -0.76
CCT4-201ENST00000394440 SPATA25Q9BR10 227 aa10.31□□□□□ -0.76
CCT4-201ENST00000394440 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
CCT4-201ENST00000394440 LELP1Q5T871 98 aa10.29□□□□□ -0.76
CCT4-201ENST00000394440 TMEM262E9PQX1 116 aa10.29□□□□□ -0.76
CCT4-201ENST00000394440 A0A0J9YXY3 114 aa10.28□□□□□ -0.76
CCT4-201ENST00000394440 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
CCT4-201ENST00000394440 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
CCT4-201ENST00000394440 IGHV3OR16-9A0A0B4J2B5 98 aa10.27□□□□□ -0.77
CCT4-201ENST00000394440 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
CCT4-201ENST00000394440 C11orf45Q8TAV5 145 aa10.27□□□□□ -0.77
CCT4-201ENST00000394440 HUWE1Q7Z6Z7 4374 aaKnown RBP10.27□□□□□ -0.77
CCT4-201ENST00000394440 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
CCT4-201ENST00000394440 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 IGHV3-30P01768 117 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 IGHV3-30-5P0DP03 117 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCT4-201ENST00000394440 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 Q8N3U1 123 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 LITAFQ99732 161 aa10.26□□□□□ -0.77
CCT4-201ENST00000394440 A0A1B0GWB2 263 aa10.25□□□□□ -0.77
CCT4-201ENST00000394440 NDUFA1O15239 70 aa10.25□□□□□ -0.77
CCT4-201ENST00000394440 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
CCT4-201ENST00000394440 RNF151Q2KHN1 245 aa10.24□□□□□ -0.77
CCT4-201ENST00000394440 MRAPQ8TCY5 172 aa10.24□□□□□ -0.77
CCT4-201ENST00000394440 SMIM13P0DJ93 91 aa10.24□□□□□ -0.77
CCT4-201ENST00000394440 A0A087WZ39 114 aa10.23□□□□□ -0.77
CCT4-201ENST00000394440 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
CCT4-201ENST00000394440 K7ERJ3 54 aa10.23□□□□□ -0.77
CCT4-201ENST00000394440 CCL25O15444 150 aa10.23□□□□□ -0.77
CCT4-201ENST00000394440 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
CCT4-201ENST00000394440 C9orf118A6NHY6 69 aa10.22□□□□□ -0.77
CCT4-201ENST00000394440 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
CCT4-201ENST00000394440 SS18Q15532 418 aa10.22□□□□□ -0.77
CCT4-201ENST00000394440 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
CCT4-201ENST00000394440 TIMM17BO60830 172 aa10.21□□□□□ -0.77
CCT4-201ENST00000394440 ANGP03950 147 aaKnown RBP10.21□□□□□ -0.77
CCT4-201ENST00000394440 RAB37Q96AX2 223 aa10.21□□□□□ -0.77
CCT4-201ENST00000394440 Q9H8V8 135 aa10.21□□□□□ -0.77
CCT4-201ENST00000394440 REG3AQ06141 175 aa10.21□□□□□ -0.78
CCT4-201ENST00000394440 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.78
CCT4-201ENST00000394440 SPANXCQ9NY87 97 aa10.21□□□□□ -0.78
CCT4-201ENST00000394440 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
CCT4-201ENST00000394440 XCL1P47992 114 aa10.19□□□□□ -0.78
CCT4-201ENST00000394440 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
CCT4-201ENST00000394440 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
CCT4-201ENST00000394440 COX7B2Q8TF08 81 aa10.18□□□□□ -0.78
CCT4-201ENST00000394440 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
CCT4-201ENST00000394440 H3BUT2 72 aa10.18□□□□□ -0.78
CCT4-201ENST00000394440 LINC01561Q8N1V8 128 aa10.18□□□□□ -0.78
CCT4-201ENST00000394440 MIAQ16674 131 aa10.17□□□□□ -0.78
CCT4-201ENST00000394440 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
CCT4-201ENST00000394440 ESRGQ1W209 222 aa10.17□□□□□ -0.78
CCT4-201ENST00000394440 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
CCT4-201ENST00000394440 WFDC10BQ8IUB3 73 aa10.17□□□□□ -0.78
CCT4-201ENST00000394440 NAA38Q9BRA0 125 aaKnown RBP10.17□□□□□ -0.78
CCT4-201ENST00000394440 HERV-K104P63124 156 aa10.16□□□□□ -0.78
CCT4-201ENST00000394440 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
CCT4-201ENST00000394440 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
CCT4-201ENST00000394440 VAMP3Q15836 100 aa10.16□□□□□ -0.78
CCT4-201ENST00000394440 A4D1N5 150 aa10.15□□□□□ -0.78
CCT4-201ENST00000394440 IGLL5B9A064 214 aa10.15□□□□□ -0.78
CCT4-201ENST00000394440 CFC1BP0CG36 223 aa10.15□□□□□ -0.78
CCT4-201ENST00000394440 CFC1P0CG37 223 aa10.15□□□□□ -0.78
CCT4-201ENST00000394440 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
CCT4-201ENST00000394440 UBE2V1Q13404 147 aa10.15□□□□□ -0.78
CCT4-201ENST00000394440 A0A1W2PPM0 123 aa10.14□□□□□ -0.79
CCT4-201ENST00000394440 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
CCT4-201ENST00000394440 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
CCT4-201ENST00000394440 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
CCT4-201ENST00000394440 ENHOQ6UWT2 76 aa10.14□□□□□ -0.79
CCT4-201ENST00000394440 TOMM7Q9P0U1 55 aa10.14□□□□□ -0.79
CCT4-201ENST00000394440 B9D2Q9BPU9 175 aa10.13□□□□□ -0.79
CCT4-201ENST00000394440 PRKDCP78527 4128 aaKnown RBP10.13□□□□□ -0.79
CCT4-201ENST00000394440 APOMO95445 188 aa10.13□□□□□ -0.79
CCT4-201ENST00000394440 FOXI1Q12951 378 aa10.13□□□□□ -0.79
CCT4-201ENST00000394440 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
CCT4-201ENST00000394440 C15orf53Q8NAA6 179 aa10.13□□□□□ -0.79
CCT4-201ENST00000394440 IGHV3-33P01772 117 aa10.12□□□□□ -0.79
CCT4-201ENST00000394440 IFITM1P13164 125 aa10.12□□□□□ -0.79
CCT4-201ENST00000394440 Q8IZM0 81 aa10.12□□□□□ -0.79
CCT4-201ENST00000394440 COL7A1Q02388 2944 aa10.12□□□□□ -0.79
CCT4-201ENST00000394440 COX7A2LO14548 114 aa10.12□□□□□ -0.79
CCT4-201ENST00000394440 DAND5Q8N907 189 aa10.12□□□□□ -0.79
CCT4-201ENST00000394440 A0A0B4J2C4 111 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms