RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 OR13C6PQ8NH95 151 aa16.14■□□□□ 0.17
RARA-202ENST00000394081 ZNF702PQ9H963 129 aa16.14■□□□□ 0.17
RARA-202ENST00000394081 LINC00846Q9NV44 126 aa16.14■□□□□ 0.17
RARA-202ENST00000394081 SMIM9A6NGZ8 99 aa16.13■□□□□ 0.17
RARA-202ENST00000394081 ATRXP46100 2492 aa16.13■□□□□ 0.17
RARA-202ENST00000394081 IGSF10Q6WRI0 2623 aa16.13■□□□□ 0.17
RARA-202ENST00000394081 IBA57-AS1B1ANH7 110 aa16.12■□□□□ 0.17
RARA-202ENST00000394081 UBE2L6O14933 153 aa16.12■□□□□ 0.17
RARA-202ENST00000394081 UPK3BQ9BT76 320 aa16.12■□□□□ 0.17
RARA-202ENST00000394081 TRGV1A0A0A0MS02 117 aa16.12■□□□□ 0.17
RARA-202ENST00000394081 J3QLI3 93 aa16.1■□□□□ 0.17
RARA-202ENST00000394081 CCL18P55774 89 aa16.1■□□□□ 0.17
RARA-202ENST00000394081 DSCR9P59020 149 aa16.1■□□□□ 0.17
RARA-202ENST00000394081 C9orf129Q5T035 196 aaKnown RBP16.1■□□□□ 0.17
RARA-202ENST00000394081 CELSR1Q9NYQ6 3014 aa16.09■□□□□ 0.17
RARA-202ENST00000394081 LINC00158P58513 81 aa16.08■□□□□ 0.17
RARA-202ENST00000394081 S100A7L2Q5SY68 101 aa16.08■□□□□ 0.17
RARA-202ENST00000394081 IGKV3D-7A0A0C4DH55 119 aa16.08■□□□□ 0.16
RARA-202ENST00000394081 DYNLRB2Q8TF09 96 aa16.08■□□□□ 0.16
RARA-202ENST00000394081 USP17L23D6RBM5 183 aa16.07■□□□□ 0.16
RARA-202ENST00000394081 LINC01561Q8N1V8 128 aa16.07■□□□□ 0.16
RARA-202ENST00000394081 LECT2O14960 151 aa16.07■□□□□ 0.16
RARA-202ENST00000394081 LY6G6DO95868 133 aa16.07■□□□□ 0.16
RARA-202ENST00000394081 ATP5EP2Q5VTU8 51 aa16.07■□□□□ 0.16
RARA-202ENST00000394081 C1orf158Q8N1D5 194 aa16.07■□□□□ 0.16
RARA-202ENST00000394081 FASNP49327 2511 aaKnown RBP16.06■□□□□ 0.16
RARA-202ENST00000394081 DEFB114Q30KQ6 69 aa16.06■□□□□ 0.16
RARA-202ENST00000394081 LINC01356Q8N9X3 169 aa16.06■□□□□ 0.16
RARA-202ENST00000394081 DPH3Q96FX2 82 aa16.06■□□□□ 0.16
RARA-202ENST00000394081 ORMDL1Q9P0S3 153 aa16.06■□□□□ 0.16
RARA-202ENST00000394081 XCL2Q9UBD3 114 aa16.06■□□□□ 0.16
RARA-202ENST00000394081 CCKP06307 115 aa16.05■□□□□ 0.16
RARA-202ENST00000394081 DEFB136Q30KP8 78 aa16.05■□□□□ 0.16
RARA-202ENST00000394081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.04■□□□□ 0.167e-7■■■■□ 25.6
RARA-202ENST00000394081 C4orf3Q8WVX3 66 aa16.04■□□□□ 0.16
RARA-202ENST00000394081 CYSTM1Q9H1C7 97 aa16.04■□□□□ 0.16
RARA-202ENST00000394081 Q6YL49 198 aa16.03■□□□□ 0.16
RARA-202ENST00000394081 LINC00167Q96N53 147 aa16.03■□□□□ 0.16
RARA-202ENST00000394081 BAHCC1Q9P281 2608 aa16.03■□□□□ 0.16
RARA-202ENST00000394081 Q6ZTI0 123 aa16.03■□□□□ 0.16
RARA-202ENST00000394081 TOMM7Q9P0U1 55 aa16.03■□□□□ 0.16
RARA-202ENST00000394081 IGHV3OR16-9A0A0B4J2B5 98 aa16.02■□□□□ 0.16
RARA-202ENST00000394081 TRBV6-4A0A1B0GX49 114 aa16.02■□□□□ 0.16
RARA-202ENST00000394081 TRAV25A0A0B4J276 109 aa16.02■□□□□ 0.15
RARA-202ENST00000394081 JMJD7-PLA2G4BH0Y9G9 81 aa16.02■□□□□ 0.15
RARA-202ENST00000394081 C18orf65Q6ZTR6 163 aa16.02■□□□□ 0.15
RARA-202ENST00000394081 STHQ8IWL8 128 aa16.02■□□□□ 0.15
RARA-202ENST00000394081 A0A087WZ39 114 aa16.01■□□□□ 0.15
RARA-202ENST00000394081 NCR3O14931 201 aa16.01■□□□□ 0.15
RARA-202ENST00000394081 A0A087WVE0 104 aa15.99■□□□□ 0.15
RARA-202ENST00000394081 ODF3L2Q3SX64 289 aa15.99■□□□□ 0.15
RARA-202ENST00000394081 NDUFC2-KCTD14E9PQ53 114 aa15.99■□□□□ 0.15
RARA-202ENST00000394081 WIPF1O43516 503 aa15.99■□□□□ 0.15
RARA-202ENST00000394081 SS18Q15532 418 aa15.99■□□□□ 0.15
RARA-202ENST00000394081 CREBBPQ92793 2442 aa15.99■□□□□ 0.15
RARA-202ENST00000394081 PAX4O43316 350 aa15.98■□□□□ 0.15
RARA-202ENST00000394081 GNLYP22749 145 aa15.98■□□□□ 0.15
RARA-202ENST00000394081 FSHBP01225 129 aa15.97■□□□□ 0.15
RARA-202ENST00000394081 LYPD5Q6UWN5 251 aa15.97■□□□□ 0.15
RARA-202ENST00000394081 TRBV10-3A0A0K0K1G6 114 aa15.96■□□□□ 0.15
RARA-202ENST00000394081 BBC3Q96PG8 261 aaPredicted RBP15.96■□□□□ 0.15
RARA-202ENST00000394081 CSPG4Q6UVK1 2322 aa15.95■□□□□ 0.14
RARA-202ENST00000394081 NDUFC2O95298 119 aa15.94■□□□□ 0.14
RARA-202ENST00000394081 GCN1Q92616 2671 aaKnown RBP15.93■□□□□ 0.14
RARA-202ENST00000394081 KIR2DL5BQ8NHK3 375 aa15.93■□□□□ 0.14
RARA-202ENST00000394081 A0A1W2PRX2 142 aa15.93■□□□□ 0.14
RARA-202ENST00000394081 TMEM256-PLSCR3K7ERE1 68 aa15.93■□□□□ 0.14
RARA-202ENST00000394081 PFN2P35080 140 aa15.92■□□□□ 0.14
RARA-202ENST00000394081 C11orf44Q8N8P7 122 aa15.92■□□□□ 0.14
RARA-202ENST00000394081 A0A096LNT2 108 aa15.92■□□□□ 0.14
RARA-202ENST00000394081 SLPIP03973 132 aa15.92■□□□□ 0.14
RARA-202ENST00000394081 TMEM86BQ8N661 226 aa15.92■□□□□ 0.14
RARA-202ENST00000394081 NOP10Q9NPE3 64 aaKnown RBP15.92■□□□□ 0.14
RARA-202ENST00000394081 CFAP46Q8IYW2 2715 aa15.91■□□□□ 0.14
RARA-202ENST00000394081 C16orf74Q96GX8 76 aa15.91■□□□□ 0.14
RARA-202ENST00000394081 TRBV6-8A0A0A6YYG3 113 aa15.91■□□□□ 0.14
RARA-202ENST00000394081 IGLV4-60A0A075B6I1 120 aa15.9■□□□□ 0.14
RARA-202ENST00000394081 VPS13CQ709C8 3753 aa15.89■□□□□ 0.13
RARA-202ENST00000394081 BCE1O60756 84 aa15.89■□□□□ 0.13
RARA-202ENST00000394081 Q8N814 137 aa15.89■□□□□ 0.13
RARA-202ENST00000394081 DSCR8Q96T75 97 aa15.88■□□□□ 0.13
RARA-202ENST00000394081 TRGV2A0A075B6R0 118 aa15.87■□□□□ 0.13
RARA-202ENST00000394081 GHRHP01286 108 aa15.87■□□□□ 0.13
RARA-202ENST00000394081 PRB1P04280 392 aa15.87■□□□□ 0.13
RARA-202ENST00000394081 C6orf226Q5I0X4 101 aa15.87■□□□□ 0.13
RARA-202ENST00000394081 COL12A1Q99715 3063 aa15.87■□□□□ 0.13
RARA-202ENST00000394081 HELZ2Q9BYK8 2649 aaKnown RBP15.86■□□□□ 0.13
RARA-202ENST00000394081 IGKV3OR2-268A0A0C4DH90 116 aa15.86■□□□□ 0.13
RARA-202ENST00000394081 PLAC8L1A1L4L8 177 aa15.86■□□□□ 0.13
RARA-202ENST00000394081 Q8IZM0 81 aa15.86■□□□□ 0.13
RARA-202ENST00000394081 LOC100131303A0A0U1RQF7 123 aa15.85■□□□□ 0.13
RARA-202ENST00000394081 OXTP01178 125 aa15.85■□□□□ 0.13
RARA-202ENST00000394081 LINC00959A0A1B0GUT2 108 aa15.85■□□□□ 0.13
RARA-202ENST00000394081 CMC4P56277 68 aaPredicted RBP15.85■□□□□ 0.13
RARA-202ENST00000394081 KHDC1LQ5JSQ8 128 aa15.85■□□□□ 0.13
RARA-202ENST00000394081 FHL2Q14192 279 aa15.84■□□□□ 0.13
RARA-202ENST00000394081 UBL5Q9BZL1 73 aa15.84■□□□□ 0.13
RARA-202ENST00000394081 TRGV4A0A0C4DH28 118 aa15.84■□□□□ 0.13
RARA-202ENST00000394081 NANOS2P60321 138 aaKnown RBP15.83■□□□□ 0.12
RARA-202ENST00000394081 CRYBG3Q68DQ2 2970 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms