RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
CHMP3-202ENST00000393773 PPP1R17O96001 155 aa9.16□□□□□ -0.94
CHMP3-202ENST00000393773 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
CHMP3-202ENST00000393773 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-202ENST00000393773 CEBPGP53567 150 aa9.15□□□□□ -0.94
CHMP3-202ENST00000393773 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
CHMP3-202ENST00000393773 TMEM18Q96B42 140 aa9.15□□□□□ -0.94
CHMP3-202ENST00000393773 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
CHMP3-202ENST00000393773 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
CHMP3-202ENST00000393773 UBE2BP63146 152 aa9.14□□□□□ -0.95
CHMP3-202ENST00000393773 TMEM241Q24JQ0 296 aa9.14□□□□□ -0.95
CHMP3-202ENST00000393773 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
CHMP3-202ENST00000393773 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
CHMP3-202ENST00000393773 V9GYV3 84 aa9.14□□□□□ -0.95
CHMP3-202ENST00000393773 RPL32P62910 135 aaKnown RBP9.13□□□□□ -0.95
CHMP3-202ENST00000393773 RIGQ13278 110 aa9.13□□□□□ -0.95
CHMP3-202ENST00000393773 KIAA0087Q14695 138 aa9.13□□□□□ -0.95
CHMP3-202ENST00000393773 TCTE3Q8IZS6 198 aa9.13□□□□□ -0.95
CHMP3-202ENST00000393773 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
CHMP3-202ENST00000393773 CARHSP1Q9Y2V2 147 aaKnown RBP9.13□□□□□ -0.95
CHMP3-202ENST00000393773 MUC17Q685J3 4493 aa9.13□□□□□ -0.95
CHMP3-202ENST00000393773 IFITM10A6NMD0 228 aa9.12□□□□□ -0.95
CHMP3-202ENST00000393773 MRPS36P82909 103 aaKnown RBP9.12□□□□□ -0.95
CHMP3-202ENST00000393773 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
CHMP3-202ENST00000393773 FAM104BQ5XKR9 115 aa9.12□□□□□ -0.95
CHMP3-202ENST00000393773 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
CHMP3-202ENST00000393773 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
CHMP3-202ENST00000393773 HBBP68871 147 aa9.11□□□□□ -0.95
CHMP3-202ENST00000393773 SMIM2Q9BVW6 85 aa9.11□□□□□ -0.95
CHMP3-202ENST00000393773 TRBV30A0A0K0K1B3 111 aa9.1□□□□□ -0.95
CHMP3-202ENST00000393773 NDUFC2-KCTD14E9PQ53 114 aa9.1□□□□□ -0.95
CHMP3-202ENST00000393773 TGIF2-C20orf24A0A0A6YYL0 155 aa9.09□□□□□ -0.95
CHMP3-202ENST00000393773 TCAPO15273 167 aa9.09□□□□□ -0.95
CHMP3-202ENST00000393773 BLOC1S1P78537 153 aa9.09□□□□□ -0.95
CHMP3-202ENST00000393773 C2orf82Q6UX34 121 aa9.09□□□□□ -0.95
CHMP3-202ENST00000393773 ALKAL2Q6UX46 152 aa9.09□□□□□ -0.95
CHMP3-202ENST00000393773 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
CHMP3-202ENST00000393773 ZNF727A8MUV8 499 aa9.08□□□□□ -0.96
CHMP3-202ENST00000393773 ZNF861PO60384 105 aa9.08□□□□□ -0.96
CHMP3-202ENST00000393773 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
CHMP3-202ENST00000393773 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
CHMP3-202ENST00000393773 A0A087X002 238 aa9.07□□□□□ -0.96
CHMP3-202ENST00000393773 LINC00242Q5T6M2 205 aa9.07□□□□□ -0.96
CHMP3-202ENST00000393773 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
CHMP3-202ENST00000393773 TSPAN13O95857 204 aa9.06□□□□□ -0.96
CHMP3-202ENST00000393773 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
CHMP3-202ENST00000393773 CKS2P33552 79 aa9.06□□□□□ -0.96
CHMP3-202ENST00000393773 FAM74A3Q4VXF1 159 aa9.06□□□□□ -0.96
CHMP3-202ENST00000393773 D6R8Y8 96 aa9.05□□□□□ -0.96
CHMP3-202ENST00000393773 NUPR1O60356 82 aa9.05□□□□□ -0.96
CHMP3-202ENST00000393773 NPYP01303 97 aa9.05□□□□□ -0.96
CHMP3-202ENST00000393773 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
CHMP3-202ENST00000393773 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
CHMP3-202ENST00000393773 SMIM27A0A1W2PRY6 76 aa9.04□□□□□ -0.96
CHMP3-202ENST00000393773 A0A1B0GW15 77 aa9.03□□□□□ -0.96
CHMP3-202ENST00000393773 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
CHMP3-202ENST00000393773 RPL23P62829 140 aaKnown RBP9.03□□□□□ -0.96
CHMP3-202ENST00000393773 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
CHMP3-202ENST00000393773 LINC01561Q8N1V8 128 aa9.02□□□□□ -0.97
CHMP3-202ENST00000393773 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
CHMP3-202ENST00000393773 C22orf24Q9Y442 160 aa9.02□□□□□ -0.97
CHMP3-202ENST00000393773 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
CHMP3-202ENST00000393773 CTDSP1Q9GZU7 261 aa9.01□□□□□ -0.97
CHMP3-202ENST00000393773 LINC00173Q6ZV60 143 aa9□□□□□ -0.97
CHMP3-202ENST00000393773 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
CHMP3-202ENST00000393773 TMEM141Q96I45 108 aa9□□□□□ -0.97
CHMP3-202ENST00000393773 ADIRFQ15847 76 aa8.99□□□□□ -0.97
CHMP3-202ENST00000393773 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
CHMP3-202ENST00000393773 XAGE1AQ9HD64 81 aa8.99□□□□□ -0.97
CHMP3-202ENST00000393773 BCE1O60756 84 aa8.98□□□□□ -0.97
CHMP3-202ENST00000393773 PPBPP02775 128 aa8.98□□□□□ -0.97
CHMP3-202ENST00000393773 CRYGAP11844 174 aa8.98□□□□□ -0.97
CHMP3-202ENST00000393773 TEX43Q6ZNM6 134 aa8.98□□□□□ -0.97
CHMP3-202ENST00000393773 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
CHMP3-202ENST00000393773 TP73-AS1Q9UF72 201 aa8.98□□□□□ -0.97
CHMP3-202ENST00000393773 F8W036 122 aa8.97□□□□□ -0.97
CHMP3-202ENST00000393773 RPL28P46779 137 aaKnown RBP8.97□□□□□ -0.97
CHMP3-202ENST00000393773 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
CHMP3-202ENST00000393773 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
CHMP3-202ENST00000393773 ZC2HC1BQ5TFG8 222 aa8.97□□□□□ -0.97
CHMP3-202ENST00000393773 Q8IZM0 81 aa8.97□□□□□ -0.97
CHMP3-202ENST00000393773 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
CHMP3-202ENST00000393773 S100A8P05109 93 aa8.96□□□□□ -0.98
CHMP3-202ENST00000393773 RAB5AP20339 215 aa8.96□□□□□ -0.98
CHMP3-202ENST00000393773 MRPL55Q7Z7F7 128 aaKnown RBP8.96□□□□□ -0.98
CHMP3-202ENST00000393773 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
CHMP3-202ENST00000393773 NAT8Q9UHE5 227 aa8.96□□□□□ -0.98
CHMP3-202ENST00000393773 C9JQL5 133 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 PRSS2P07478 247 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 CKS1BP61024 79 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 Q6ZN92 141 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 AMELXQ99217 191 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 C2orf88Q9BSF0 95 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
CHMP3-202ENST00000393773 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
CHMP3-202ENST00000393773 FAM19A3Q7Z5A8 133 aa8.94□□□□□ -0.98
CHMP3-202ENST00000393773 KRTAP13-1Q8IUC0 172 aa8.94□□□□□ -0.98
CHMP3-202ENST00000393773 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
CHMP3-202ENST00000393773 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
CHMP3-202ENST00000393773 PRSS47A8MTI9 375 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms