RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
GGPS1-203ENST00000391855 APOMO95445 188 aa8.13□□□□□ -1.11
GGPS1-203ENST00000391855 NPSP0C0P6 89 aa8.13□□□□□ -1.11
GGPS1-203ENST00000391855 RPS10P5Q9NQ39 176 aa8.13□□□□□ -1.11
GGPS1-203ENST00000391855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
GGPS1-203ENST00000391855 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
GGPS1-203ENST00000391855 Q6ZN92 141 aa8.12□□□□□ -1.11
GGPS1-203ENST00000391855 TMEM141Q96I45 108 aa8.12□□□□□ -1.11
GGPS1-203ENST00000391855 CARD19Q96LW7 228 aa8.12□□□□□ -1.11
GGPS1-203ENST00000391855 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 SNAPINO95295 136 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 SYCNQ0VAF6 134 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 SVBPQ8N300 66 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 OR10D4PQ8NGN7 298 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 FAM104AQ969W3 186 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 C2orf88Q9BSF0 95 aa8.11□□□□□ -1.11
GGPS1-203ENST00000391855 TGIF2-C20orf24A0A0A6YYL0 155 aa8.1□□□□□ -1.11
GGPS1-203ENST00000391855 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
GGPS1-203ENST00000391855 PAPPA-AS1Q5QFB9 102 aa8.1□□□□□ -1.11
GGPS1-203ENST00000391855 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
GGPS1-203ENST00000391855 SPACA4Q8TDM5 124 aa8.1□□□□□ -1.11
GGPS1-203ENST00000391855 C2orf48Q96LS8 159 aa8.1□□□□□ -1.11
GGPS1-203ENST00000391855 OPRPNQ99935 248 aaPredicted RBP8.1□□□□□ -1.11
GGPS1-203ENST00000391855 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
GGPS1-203ENST00000391855 F8WDY8 70 aa8.09□□□□□ -1.11
GGPS1-203ENST00000391855 APOC3P02656 99 aa8.09□□□□□ -1.11
GGPS1-203ENST00000391855 COX6A2Q02221 97 aa8.09□□□□□ -1.11
GGPS1-203ENST00000391855 KIAA1644Q3SXP7 199 aa8.09□□□□□ -1.11
GGPS1-203ENST00000391855 LINC00474Q9P2X8 69 aa8.09□□□□□ -1.11
GGPS1-203ENST00000391855 IGLV4-69A0A075B6H9 119 aa8.08□□□□□ -1.12
GGPS1-203ENST00000391855 PANO1I0J062 215 aa8.08□□□□□ -1.12
GGPS1-203ENST00000391855 SPAG11BQ08648 103 aa8.08□□□□□ -1.12
GGPS1-203ENST00000391855 PRSS3P2Q8NHM4 247 aa8.08□□□□□ -1.12
GGPS1-203ENST00000391855 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
GGPS1-203ENST00000391855 TIMM17AQ99595 171 aa8.08□□□□□ -1.12
GGPS1-203ENST00000391855 ALKBH7Q9BT30 221 aaPredicted RBP8.08□□□□□ -1.12
GGPS1-203ENST00000391855 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
GGPS1-203ENST00000391855 FABP9Q0Z7S8 132 aa8.07□□□□□ -1.12
GGPS1-203ENST00000391855 DPH3Q96FX2 82 aa8.07□□□□□ -1.12
GGPS1-203ENST00000391855 AMELXQ99217 191 aa8.07□□□□□ -1.12
GGPS1-203ENST00000391855 VCX2Q9H322 139 aa8.07□□□□□ -1.12
GGPS1-203ENST00000391855 PLAC8Q9NZF1 115 aa8.07□□□□□ -1.12
GGPS1-203ENST00000391855 A0A087WYN8 130 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 UBE2D1P51668 147 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 LINC01561Q8N1V8 128 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 ORAOV1Q8WV07 137 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 TOMM6Q96B49 74 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
GGPS1-203ENST00000391855 A0A087WZ39 114 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
GGPS1-203ENST00000391855 SEC11AP67812 179 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 MAJINQ3KP22 176 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
GGPS1-203ENST00000391855 A0A096LNI7 61 aa8.04□□□□□ -1.12
GGPS1-203ENST00000391855 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
GGPS1-203ENST00000391855 Q6ZRU5 148 aa8.04□□□□□ -1.12
GGPS1-203ENST00000391855 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
GGPS1-203ENST00000391855 FA2HQ7L5A8 372 aa8.04□□□□□ -1.12
GGPS1-203ENST00000391855 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
GGPS1-203ENST00000391855 NDUFA1O15239 70 aa8.03□□□□□ -1.12
GGPS1-203ENST00000391855 KRTAP10-4P60372 401 aaPredicted RBP8.03□□□□□ -1.12
GGPS1-203ENST00000391855 ERASQ7Z444 233 aa8.03□□□□□ -1.12
GGPS1-203ENST00000391855 C7orf33Q8WU49 177 aa8.03□□□□□ -1.12
GGPS1-203ENST00000391855 MRPL35Q9NZE8 188 aaKnown RBP8.03□□□□□ -1.12
GGPS1-203ENST00000391855 STPG4Q8N801 248 aa8.03□□□□□ -1.12
GGPS1-203ENST00000391855 SCGB3A1Q96QR1 104 aa8.03□□□□□ -1.12
GGPS1-203ENST00000391855 TRAPPC1Q9Y5R8 145 aa8.03□□□□□ -1.12
GGPS1-203ENST00000391855 PTTG1IPP53801 180 aa8.02□□□□□ -1.13
GGPS1-203ENST00000391855 HERVK_113P63121 156 aa8.02□□□□□ -1.13
GGPS1-203ENST00000391855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
GGPS1-203ENST00000391855 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
GGPS1-203ENST00000391855 GEMIN7Q9H840 131 aaKnown RBP8□□□□□ -1.13
GGPS1-203ENST00000391855 RAB5BP61020 215 aa7.99□□□□□ -1.13
GGPS1-203ENST00000391855 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
GGPS1-203ENST00000391855 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
GGPS1-203ENST00000391855 C18orf32Q8TCD1 76 aa7.99□□□□□ -1.13
GGPS1-203ENST00000391855 PACRGQ96M98 296 aaPredicted RBP7.99□□□□□ -1.13
GGPS1-203ENST00000391855 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
GGPS1-203ENST00000391855 PRSS2P07478 247 aa7.98□□□□□ -1.13
GGPS1-203ENST00000391855 TLX1NBP0CAT3 122 aa7.98□□□□□ -1.13
GGPS1-203ENST00000391855 KIAA0087Q14695 138 aa7.98□□□□□ -1.13
GGPS1-203ENST00000391855 SRRM2Q9UQ35 2752 aaKnown RBP7.98□□□□□ -1.13
GGPS1-203ENST00000391855 LINC00614P0C842 121 aa7.97□□□□□ -1.13
GGPS1-203ENST00000391855 Q8IZM0 81 aa7.97□□□□□ -1.13
GGPS1-203ENST00000391855 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
GGPS1-203ENST00000391855 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.13
GGPS1-203ENST00000391855 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.13
GGPS1-203ENST00000391855 HBDP02042 147 aa7.96□□□□□ -1.13
GGPS1-203ENST00000391855 PMVKQ15126 192 aa7.96□□□□□ -1.13
GGPS1-203ENST00000391855 C6orf48Q9UBA6 75 aa7.96□□□□□ -1.13
GGPS1-203ENST00000391855 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.14
GGPS1-203ENST00000391855 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
GGPS1-203ENST00000391855 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms