RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SMIM3Q9BZL3 60 aa-0.95□□□□□ -2.56
SNORD28B-201ENST00000390993 LAMA2P24043 3122 aaKnown RBP-0.95□□□□□ -2.56
SNORD28B-201ENST00000390993 MYO18BQ8IUG5 2567 aa-0.95□□□□□ -2.56
SNORD28B-201ENST00000390993 PBRM1Q86U86 1689 aa-0.95□□□□□ -2.56
SNORD28B-201ENST00000390993 FAT3Q8TDW7 4589 aa-0.95□□□□□ -2.56
SNORD28B-201ENST00000390993 RYR1P21817 5038 aa-0.95□□□□□ -2.56
SNORD28B-201ENST00000390993 NBASA2RRP1 2371 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 KIAA0556O60303 1618 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 DOCK1Q14185 1865 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 LINC00959A0A1B0GUT2 108 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 GNG14A0A1W2PPG7 69 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 LINC00694P0DN24 101 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 C10orf113Q5VZT2 155 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 PRO1933Q9H354 126 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 MYH6P13533 1939 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 TULP4Q9NRJ4 1543 aa-0.96□□□□□ -2.56
SNORD28B-201ENST00000390993 RYR3Q15413 4870 aa-0.97□□□□□ -2.56
SNORD28B-201ENST00000390993 SMCO1Q147U7 214 aa-0.97□□□□□ -2.56
SNORD28B-201ENST00000390993 H1FX-AS1Q4G0G2 97 aa-0.97□□□□□ -2.56
SNORD28B-201ENST00000390993 SELENOSQ9BQE4 189 aa-0.97□□□□□ -2.56
SNORD28B-201ENST00000390993 CCDC167Q9P0B6 97 aa-0.97□□□□□ -2.56
SNORD28B-201ENST00000390993 DOCK2Q92608 1830 aa-0.97□□□□□ -2.56
SNORD28B-201ENST00000390993 KNL1Q8NG31 2342 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 BIRC6Q9NR09 4857 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 HMGXB3Q12766 1538 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 HMGN4O00479 90 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 NBEAP1P0C6P0 100 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 COPZ1P61923 177 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 MRPL54Q6P161 138 aaKnown RBP-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 AKAP14Q86UN6 197 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 FAM167A-AS1Q96KT0 104 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 LINC01600Q96MT4 127 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 TMEM191AQ9H0A3 160 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 CRIPTQ9P021 101 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 HECTD1Q9ULT8 2610 aa-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 RIMS1Q86UR5 1692 aaKnown RBP-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 PRG4Q92954 1404 aaPredicted RBP-0.98□□□□□ -2.57
SNORD28B-201ENST00000390993 MAGI1Q96QZ7 1491 aaPredicted RBP-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 I3L3M4 83 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 MT1AP04731 61 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 SCGB1A1P11684 91 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 BTG2P78543 158 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 LZICQ8WZA0 190 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 NXT2Q9NPJ8 142 aaKnown RBP-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 UQCR10Q9UDW1 63 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 DNAH9Q9NYC9 4486 aa-0.99□□□□□ -2.57
SNORD28B-201ENST00000390993 ZFHX3Q15911 3703 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 ARAP2Q8WZ64 1704 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 CKS1BP61024 79 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 UBE2D3P61077 147 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 UBE2D2P62837 147 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 PDCD10Q9BUL8 212 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 TPT1P8Q9HAU6 139 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 FHAD1B1AJZ9 1412 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 SLIT1O75093 1534 aa-1□□□□□ -2.57
SNORD28B-201ENST00000390993 TEP1Q99973 2627 aaKnown RBP-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 PATJQ8NI35 1801 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 SPEF2Q9C093 1822 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 IGLC1P0CG04 106 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 SEC11AP67812 179 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 TSTD1Q8NFU3 115 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 MYOZ3Q8TDC0 251 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 PPP3R2Q96LZ3 170 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 SPRR4Q96PI1 79 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 LYSTQ99698 3801 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 PRRC2CQ9Y520 2896 aaKnown RBP-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 FMN2Q9NZ56 1722 aa-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.01□□□□□ -2.57
SNORD28B-201ENST00000390993 CUBNO60494 3623 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 TRAV30A0A087WSZ9 112 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 H3BNG1 76 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 CCL22O00626 93 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 TNRC18O15417 2968 aaPredicted RBP-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 ACACAQ13085 2346 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 ARL11Q969Q4 196 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 PFDN5Q99471 154 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 PAPPA2Q9BXP8 1791 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 COPZ2Q9P299 210 aa-1.02□□□□□ -2.57
SNORD28B-201ENST00000390993 VPS13BQ7Z7G8 4022 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 A0A0G2JMZ2 1700 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 CHKB-CPT1BH3BT56 60 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 RPS25P62851 125 aaKnown RBP-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 C9orf153Q5TBE3 101 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 HEPN1Q6WQI6 88 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 TSLPQ969D9 159 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 DPH3Q96FX2 82 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 SNRNP25Q9BV90 132 aaKnown RBP-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 RERGLQ9H628 205 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 SERP1Q9Y6X1 66 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 ARL2-SNX15V9GYD0 113 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 KIAA1109Q2LD37 5005 aa-1.03□□□□□ -2.57
SNORD28B-201ENST00000390993 DNAH2Q9P225 4427 aa-1.03□□□□□ -2.58
SNORD28B-201ENST00000390993 ZZEF1O43149 2961 aa-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 CFTRP13569 1480 aa-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 A0A1B0GWA3 101 aa-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM223AQ8IWN6 122 aa-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 C8orf59Q8N0T1 100 aaPredicted RBP-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 SPANXDQ9BXN6 97 aa-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 BTAF1O14981 1849 aa-1.04□□□□□ -2.58
SNORD28B-201ENST00000390993 PTPN23Q9H3S7 1636 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms