RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 UNC79Q9P2D8 2635 aa10.58□□□□□ -0.72
VPS9D1-201ENST00000389386 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
VPS9D1-201ENST00000389386 IGHV3-11P01762 117 aa10.58□□□□□ -0.72
VPS9D1-201ENST00000389386 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.72
VPS9D1-201ENST00000389386 SEC61GP60059 68 aa10.58□□□□□ -0.72
VPS9D1-201ENST00000389386 H3BUX3 64 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 EDN2P20800 178 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 COX6A2Q02221 97 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 SONP18583 2426 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 HOXD3P31249 432 aaPredicted RBP10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 BLCAPP62952 87 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 LINC00467Q9BRT7 94 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 C14orf132Q9NPU4 83 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 PKIGQ9Y2B9 76 aa10.57□□□□□ -0.72
VPS9D1-201ENST00000389386 SORL1Q92673 2214 aa10.56□□□□□ -0.72
VPS9D1-201ENST00000389386 OBSCN-AS1Q96MR7 158 aa10.56□□□□□ -0.72
VPS9D1-201ENST00000389386 MYO9AB2RTY4 2548 aa10.56□□□□□ -0.72
VPS9D1-201ENST00000389386 ACANP16112 2415 aa10.56□□□□□ -0.72
VPS9D1-201ENST00000389386 RPL28P46779 137 aaKnown RBP10.56□□□□□ -0.72
VPS9D1-201ENST00000389386 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
VPS9D1-201ENST00000389386 ITPR3Q14573 2671 aa10.55□□□□□ -0.72
VPS9D1-201ENST00000389386 FHL2Q14192 279 aa10.55□□□□□ -0.72
VPS9D1-201ENST00000389386 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
VPS9D1-201ENST00000389386 USMG5Q96IX5 58 aa10.54□□□□□ -0.72
VPS9D1-201ENST00000389386 FLNAP21333 2647 aaKnown RBP10.54□□□□□ -0.72
VPS9D1-201ENST00000389386 MSMBP08118 114 aa10.53□□□□□ -0.72
VPS9D1-201ENST00000389386 PFN2P35080 140 aa10.53□□□□□ -0.72
VPS9D1-201ENST00000389386 Q6ZSN1 163 aa10.53□□□□□ -0.72
VPS9D1-201ENST00000389386 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.72
VPS9D1-201ENST00000389386 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
VPS9D1-201ENST00000389386 A0A087WYN8 130 aa10.52□□□□□ -0.73
VPS9D1-201ENST00000389386 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
VPS9D1-201ENST00000389386 PF4P02776 101 aa10.52□□□□□ -0.73
VPS9D1-201ENST00000389386 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
VPS9D1-201ENST00000389386 CUBNO60494 3623 aa10.51□□□□□ -0.73
VPS9D1-201ENST00000389386 TRAV13-2A0A0B4J235 113 aa10.51□□□□□ -0.73
VPS9D1-201ENST00000389386 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
VPS9D1-201ENST00000389386 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
VPS9D1-201ENST00000389386 PDZD2O15018 2839 aa10.51□□□□□ -0.73
VPS9D1-201ENST00000389386 SETD2Q9BYW2 2564 aaPredicted RBP10.51□□□□□ -0.73
VPS9D1-201ENST00000389386 KNCNA6PVL3 124 aa10.5□□□□□ -0.73
VPS9D1-201ENST00000389386 NDUFC2O95298 119 aa10.5□□□□□ -0.73
VPS9D1-201ENST00000389386 IGHV3-38A0A0C4DH36 116 aa10.49□□□□□ -0.73
VPS9D1-201ENST00000389386 TMEM86BQ8N661 226 aa10.49□□□□□ -0.73
VPS9D1-201ENST00000389386 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
VPS9D1-201ENST00000389386 K7EMT4 169 aa10.49□□□□□ -0.73
VPS9D1-201ENST00000389386 C10orf99Q6UWK7 81 aa10.49□□□□□ -0.73
VPS9D1-201ENST00000389386 DGAT2L7PQ6IED9 249 aa10.49□□□□□ -0.73
VPS9D1-201ENST00000389386 H3BUA1 57 aa10.48□□□□□ -0.73
VPS9D1-201ENST00000389386 CRPP02741 224 aa10.48□□□□□ -0.73
VPS9D1-201ENST00000389386 FLNBO75369 2602 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 IGKV2-28A0A075B6P5 120 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 A6NDX4 124 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 NCR3O14931 201 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 IGKV2D-28P01615 120 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 HILS1P60008 231 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 DEFB113Q30KQ7 82 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 NF1P21359 2839 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 B4DSR2 109 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 SMIM11BQ8TCY0 68 aa10.47□□□□□ -0.73
VPS9D1-201ENST00000389386 GHRHP01286 108 aa10.46□□□□□ -0.73
VPS9D1-201ENST00000389386 HTN1P15515 57 aa10.46□□□□□ -0.73
VPS9D1-201ENST00000389386 SNRPD3P62318 126 aaKnown RBP10.46□□□□□ -0.73
VPS9D1-201ENST00000389386 FAM19A3Q7Z5A8 133 aa10.46□□□□□ -0.73
VPS9D1-201ENST00000389386 V9GYY9 64 aa10.46□□□□□ -0.73
VPS9D1-201ENST00000389386 DEFB112Q30KQ8 113 aa10.46□□□□□ -0.74
VPS9D1-201ENST00000389386 H0YGX0 51 aa10.45□□□□□ -0.74
VPS9D1-201ENST00000389386 Q96MF0 132 aa10.45□□□□□ -0.74
VPS9D1-201ENST00000389386 CR1P17927 2039 aa10.45□□□□□ -0.74
VPS9D1-201ENST00000389386 K7EQG2 157 aa10.45□□□□□ -0.74
VPS9D1-201ENST00000389386 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
VPS9D1-201ENST00000389386 MTORP42345 2549 aa10.44□□□□□ -0.74
VPS9D1-201ENST00000389386 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
VPS9D1-201ENST00000389386 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
VPS9D1-201ENST00000389386 PRM2P04554 102 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 CCKP06307 115 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 TRAV23DV6A0A075B6W5 121 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 A0A096LNT2 108 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 LECT2O14960 151 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 WFDC11Q8NEX6 87 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
VPS9D1-201ENST00000389386 RBMY1BA6NDE4 496 aaKnown RBP10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 RBMY1EA6NEQ0 496 aaKnown RBP10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 RBMY1DP0C7P1 496 aaKnown RBP10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 DSCR9P59020 149 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 C20orf197Q8N268 126 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 IGLV1-40P01703 118 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 PSMB8P28062 276 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 WFDC9Q8NEX5 89 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 AKAP9Q99996 3911 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 XCL1P47992 114 aa10.42□□□□□ -0.74
VPS9D1-201ENST00000389386 SS18Q15532 418 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms