RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CARD19Q96LW7 228 aa16.57■□□□□ 0.24
NPHP3-202ENST00000383282 MRPL18Q9H0U6 180 aaKnown RBP16.57■□□□□ 0.24
NPHP3-202ENST00000383282 FABP9Q0Z7S8 132 aa16.56■□□□□ 0.24
NPHP3-202ENST00000383282 TCAPO15273 167 aa16.55■□□□□ 0.24
NPHP3-202ENST00000383282 TRAPPC1Q9Y5R8 145 aa16.55■□□□□ 0.24
NPHP3-202ENST00000383282 LOC389332A0A1B0GUA5 103 aa16.54■□□□□ 0.24
NPHP3-202ENST00000383282 ZNF561-AS1K7EIQ3 104 aa16.54■□□□□ 0.24
NPHP3-202ENST00000383282 MRPL52Q86TS9 123 aaKnown RBP16.54■□□□□ 0.24
NPHP3-202ENST00000383282 CD164L2Q6UWJ8 174 aa16.53■□□□□ 0.24
NPHP3-202ENST00000383282 LINC00526Q96FQ7 95 aa16.53■□□□□ 0.24
NPHP3-202ENST00000383282 LINC01600Q96MT4 127 aa16.53■□□□□ 0.24
NPHP3-202ENST00000383282 CDC42SE2Q9NRR3 84 aa16.53■□□□□ 0.24
NPHP3-202ENST00000383282 RAB5AP20339 215 aa16.52■□□□□ 0.24
NPHP3-202ENST00000383282 ZNF664Q8N3J9 261 aa16.51■□□□□ 0.23
NPHP3-202ENST00000383282 SYCNQ0VAF6 134 aa16.5■□□□□ 0.23
NPHP3-202ENST00000383282 YPEL4Q96NS1 127 aa16.5■□□□□ 0.23
NPHP3-202ENST00000383282 TMEM18Q96B42 140 aa16.49■□□□□ 0.23
NPHP3-202ENST00000383282 PRSS47A8MTI9 375 aa16.48■□□□□ 0.23
NPHP3-202ENST00000383282 SMAGPQ0VAQ4 97 aa16.48■□□□□ 0.23
NPHP3-202ENST00000383282 SPINK6Q6UWN8 80 aa16.48■□□□□ 0.23
NPHP3-202ENST00000383282 TNXBP22105 4242 aa16.48■□□□□ 0.23
NPHP3-202ENST00000383282 MALP21145 153 aa16.47■□□□□ 0.23
NPHP3-202ENST00000383282 REG3GQ6UW15 175 aa16.47■□□□□ 0.23
NPHP3-202ENST00000383282 Q8N8P6 123 aa16.47■□□□□ 0.23
NPHP3-202ENST00000383282 ALKBH7Q9BT30 221 aaPredicted RBP16.47■□□□□ 0.23
NPHP3-202ENST00000383282 NXT2Q9NPJ8 142 aaKnown RBP16.47■□□□□ 0.23
NPHP3-202ENST00000383282 Q6ZRP5 223 aa16.46■□□□□ 0.23
NPHP3-202ENST00000383282 C1orf196B1AJZ1 125 aa16.45■□□□□ 0.22
NPHP3-202ENST00000383282 A0A0J9YXV3 536 aa16.43■□□□□ 0.22
NPHP3-202ENST00000383282 LOC107984640A0A0U1RRK4 108 aa16.43■□□□□ 0.22
NPHP3-202ENST00000383282 COX7A2LO14548 114 aa16.43■□□□□ 0.22
NPHP3-202ENST00000383282 IFI27P40305 119 aaPredicted RBP16.43■□□□□ 0.22
NPHP3-202ENST00000383282 PTTG1IPP53801 180 aa16.43■□□□□ 0.22
NPHP3-202ENST00000383282 CSDC2Q9Y534 153 aaKnown RBP16.43■□□□□ 0.22
NPHP3-202ENST00000383282 IGLV4-69A0A075B6H9 119 aa16.42■□□□□ 0.22
NPHP3-202ENST00000383282 GAGE2BQ13066 116 aa16.42■□□□□ 0.22
NPHP3-202ENST00000383282 K7EMI3 77 aa16.41■□□□□ 0.22
NPHP3-202ENST00000383282 SCO1O75880 301 aa16.41■□□□□ 0.22
NPHP3-202ENST00000383282 ORMDL2Q53FV1 153 aa16.41■□□□□ 0.22
NPHP3-202ENST00000383282 S100A1P23297 94 aa16.4■□□□□ 0.22
NPHP3-202ENST00000383282 CAMK2N2Q96S95 79 aa16.4■□□□□ 0.22
NPHP3-202ENST00000383282 UBE2D4Q9Y2X8 147 aa16.4■□□□□ 0.22
NPHP3-202ENST00000383282 LRP2P98164 4655 aa16.4■□□□□ 0.22
NPHP3-202ENST00000383282 ATP6V1G1O75348 118 aa16.39■□□□□ 0.21
NPHP3-202ENST00000383282 TRAV13-1A0A0B4J241 112 aa16.38■□□□□ 0.21
NPHP3-202ENST00000383282 RPL39P62891 51 aaKnown RBP16.38■□□□□ 0.21
NPHP3-202ENST00000383282 FA2HQ7L5A8 372 aa16.38■□□□□ 0.21
NPHP3-202ENST00000383282 APOMO95445 188 aa16.37■□□□□ 0.21
NPHP3-202ENST00000383282 SRSF9Q13242 221 aaKnown RBP eCLIP16.37■□□□□ 0.21
NPHP3-202ENST00000383282 RNASE13Q5GAN3 156 aaKnown RBP16.37■□□□□ 0.21
NPHP3-202ENST00000383282 G0S2P27469 103 aa16.36■□□□□ 0.21
NPHP3-202ENST00000383282 C2orf48Q96LS8 159 aa16.36■□□□□ 0.21
NPHP3-202ENST00000383282 TIMM21Q9BVV7 248 aa16.36■□□□□ 0.21
NPHP3-202ENST00000383282 KRTAP10-8P60410 259 aa16.35■□□□□ 0.21
NPHP3-202ENST00000383282 SPANXA1Q9NS26 97 aa16.35■□□□□ 0.21
NPHP3-202ENST00000383282 CYSLTR1Q9Y271 337 aa16.35■□□□□ 0.21
NPHP3-202ENST00000383282 COLCA2A8K830 154 aa16.34■□□□□ 0.21
NPHP3-202ENST00000383282 C5orf38Q86SI9 138 aa16.34■□□□□ 0.21
NPHP3-202ENST00000383282 C18orf32Q8TCD1 76 aa16.34■□□□□ 0.21
NPHP3-202ENST00000383282 TRGC2P03986 189 aa16.33■□□□□ 0.2
NPHP3-202ENST00000383282 C2orf66Q6UXQ4 117 aa16.33■□□□□ 0.2
NPHP3-202ENST00000383282 Q6ZUT4 128 aa16.33■□□□□ 0.2
NPHP3-202ENST00000383282 RPL18AQ02543 176 aaKnown RBP16.32■□□□□ 0.2
NPHP3-202ENST00000383282 ODF1Q14990 250 aa16.32■□□□□ 0.2
NPHP3-202ENST00000383282 A0A1W2PNN7 141 aa16.31■□□□□ 0.2
NPHP3-202ENST00000383282 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.31■□□□□ 0.2
NPHP3-202ENST00000383282 SPAG11BQ08648 103 aa16.31■□□□□ 0.2
NPHP3-202ENST00000383282 RAB5BP61020 215 aa16.3■□□□□ 0.2
NPHP3-202ENST00000383282 C9orf116Q5BN46 136 aaPredicted RBP16.29■□□□□ 0.2
NPHP3-202ENST00000383282 OR10D4PQ8NGN7 298 aa16.28■□□□□ 0.2
NPHP3-202ENST00000383282 PYGO1Q9Y3Y4 419 aa16.28■□□□□ 0.2
NPHP3-202ENST00000383282 LINC01546A6NGU7 62 aa16.27■□□□□ 0.2
NPHP3-202ENST00000383282 LINC00614P0C842 121 aa16.27■□□□□ 0.2
NPHP3-202ENST00000383282 MRPS36P82909 103 aaKnown RBP16.27■□□□□ 0.2
NPHP3-202ENST00000383282 RNF151Q2KHN1 245 aa16.27■□□□□ 0.2
NPHP3-202ENST00000383282 PSORS1C2Q9UIG4 136 aa16.26■□□□□ 0.19
NPHP3-202ENST00000383282 LINC01549A6NIU2 74 aa16.25■□□□□ 0.19
NPHP3-202ENST00000383282 Q6ZN92 141 aa16.25■□□□□ 0.19
NPHP3-202ENST00000383282 TOMM6Q96B49 74 aa16.25■□□□□ 0.19
NPHP3-202ENST00000383282 OPRPNQ99935 248 aaPredicted RBP16.25■□□□□ 0.19
NPHP3-202ENST00000383282 TMEM141Q96I45 108 aa16.24■□□□□ 0.19
NPHP3-202ENST00000383282 F8WDY8 70 aa16.23■□□□□ 0.19
NPHP3-202ENST00000383282 BAGE3Q86Y29 109 aa16.23■□□□□ 0.19
NPHP3-202ENST00000383282 ORAOV1Q8WV07 137 aa16.23■□□□□ 0.19
NPHP3-202ENST00000383282 IGLV4-3A0A075B6K6 122 aa16.22■□□□□ 0.19
NPHP3-202ENST00000383282 IFITM10A6NMD0 228 aa16.22■□□□□ 0.19
NPHP3-202ENST00000383282 C1orf137Q5JT78 98 aa16.22■□□□□ 0.19
NPHP3-202ENST00000383282 PHF5AQ7RTV0 110 aaKnown RBP16.22■□□□□ 0.19
NPHP3-202ENST00000383282 SCGB3A1Q96QR1 104 aa16.22■□□□□ 0.19
NPHP3-202ENST00000383282 MRPL35Q9NZE8 188 aaKnown RBP16.22■□□□□ 0.19
NPHP3-202ENST00000383282 RNF213Q63HN8 5207 aa16.22■□□□□ 0.19
NPHP3-202ENST00000383282 NPSP0C0P6 89 aa16.21■□□□□ 0.19
NPHP3-202ENST00000383282 PAPPA-AS1Q5QFB9 102 aa16.21■□□□□ 0.19
NPHP3-202ENST00000383282 TEX43Q6ZNM6 134 aa16.21■□□□□ 0.19
NPHP3-202ENST00000383282 C2orf88Q9BSF0 95 aa16.21■□□□□ 0.19
NPHP3-202ENST00000383282 NDUFA1O15239 70 aa16.2■□□□□ 0.18
NPHP3-202ENST00000383282 URB1-AS1Q96HZ7 61 aa16.2■□□□□ 0.18
NPHP3-202ENST00000383282 TIMM17AQ99595 171 aa16.2■□□□□ 0.18
NPHP3-202ENST00000383282 IGHV3OR16-9A0A0B4J2B5 98 aa16.19■□□□□ 0.18
NPHP3-202ENST00000383282 IGIPA6NJ69 53 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms